Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 RNU7-138P-201ENST00000459479 64 ntBASIC4.46□□□□□ -1.7
VAMP4O75379 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.46□□□□□ -1.7
VAMP4O75379 SNORA25.10-201ENST00000515926 124 ntBASIC4.46□□□□□ -1.7
VAMP4O75379 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.46□□□□□ -1.7
VAMP4O75379 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.46□□□□□ -1.7
VAMP4O75379 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VAMP4O75379 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.46□□□□□ -1.7
VAMP4O75379 AL117187.1-201ENST00000555482 181 ntBASIC4.46□□□□□ -1.7
VAMP4O75379 MIR7851-201ENST00000610611 160 ntBASIC4.46□□□□□ -1.7
VAMP4O75379 AC011890.2-201ENST00000613393 294 ntBASIC4.46□□□□□ -1.7
VAMP4O75379 AC010205.1-201ENST00000616668 449 ntBASIC4.46□□□□□ -1.7
VAMP4O75379 MIR6075-201ENST00000620782 95 ntBASIC4.46□□□□□ -1.7
VAMP4O75379 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VAMP4O75379 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
VAMP4O75379 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VAMP4O75379 AF127577.6-201ENST00000623352 2191 ntBASIC4.46□□□□□ -1.7
VAMP4O75379 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VAMP4O75379 MTND4P1-201ENST00000457501 1466 ntBASIC4.45□□□□□ -1.7
VAMP4O75379 RNU6-266P-201ENST00000364225 107 ntBASIC4.45□□□□□ -1.7
VAMP4O75379 RNU6-1106P-201ENST00000390845 107 ntBASIC4.45□□□□□ -1.7
VAMP4O75379 RN7SKP111-201ENST00000410349 271 ntBASIC4.45□□□□□ -1.7
VAMP4O75379 RNU6-293P-201ENST00000411259 106 ntBASIC4.45□□□□□ -1.7
VAMP4O75379 AL513331.1-201ENST00000411908 397 ntBASIC4.45□□□□□ -1.7
VAMP4O75379 RPL21P90-201ENST00000415692 466 ntBASIC4.45□□□□□ -1.7
VAMP4O75379 AC244098.2-201ENST00000422068 99 ntBASIC4.45□□□□□ -1.7
VAMP4O75379 AL159987.2-201ENST00000432754 307 ntBASIC4.45□□□□□ -1.7
VAMP4O75379 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.45□□□□□ -1.7
VAMP4O75379 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC4.45□□□□□ -1.7
VAMP4O75379 RPL23AP62-201ENST00000463396 453 ntBASIC4.45□□□□□ -1.7
VAMP4O75379 AC008155.2-201ENST00000464337 397 ntBASIC4.45□□□□□ -1.7
VAMP4O75379 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.45□□□□□ -1.7
VAMP4O75379 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.45□□□□□ -1.7
VAMP4O75379 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.45□□□□□ -1.7
VAMP4O75379 MIR4680-201ENST00000580906 66 ntBASIC4.45□□□□□ -1.7
VAMP4O75379 U3.45-201ENST00000607547 219 ntBASIC4.45□□□□□ -1.7
VAMP4O75379 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.45□□□□□ -1.7
VAMP4O75379 AC092608.2-201ENST00000624427 218 ntBASIC4.45□□□□□ -1.7
VAMP4O75379 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.45□□□□□ -1.7
VAMP4O75379 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
VAMP4O75379 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VAMP4O75379 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VAMP4O75379 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.45□□□□□ -1.7
VAMP4O75379 CEP170P1-201ENST00000502249 4587 ntBASIC4.45□□□□□ -1.7
VAMP4O75379 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VAMP4O75379 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VAMP4O75379 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
VAMP4O75379 SNORA31-201ENST00000362607 130 ntBASIC4.44□□□□□ -1.7
VAMP4O75379 RNU6-490P-201ENST00000362985 107 ntBASIC4.44□□□□□ -1.7
VAMP4O75379 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.44□□□□□ -1.7
VAMP4O75379 AC236972.1-201ENST00000433225 199 ntBASIC4.44□□□□□ -1.7
VAMP4O75379 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.44□□□□□ -1.7
VAMP4O75379 AC092436.3-201ENST00000511788 257 ntBASIC4.44□□□□□ -1.7
VAMP4O75379 AC069113.1-201ENST00000517763 267 ntBASIC4.44□□□□□ -1.7
VAMP4O75379 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VAMP4O75379 SNRPGP16-201ENST00000533275 226 ntBASIC4.44□□□□□ -1.7
VAMP4O75379 AC025423.5-201ENST00000550230 219 ntBASIC4.44□□□□□ -1.7
VAMP4O75379 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.44□□□□□ -1.7
VAMP4O75379 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.44□□□□□ -1.7
VAMP4O75379 AC073539.2-201ENST00000597113 165 ntBASIC4.44□□□□□ -1.7
VAMP4O75379 AC002044.1-201ENST00000606707 158 ntBASIC4.44□□□□□ -1.7
VAMP4O75379 AL161423.1-201ENST00000613700 262 ntBASIC4.44□□□□□ -1.7
VAMP4O75379 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VAMP4O75379 U6.105-201ENST00000637379 88 ntBASIC4.44□□□□□ -1.7
VAMP4O75379 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VAMP4O75379 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
VAMP4O75379 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VAMP4O75379 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VAMP4O75379 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VAMP4O75379 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VAMP4O75379 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VAMP4O75379 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
VAMP4O75379 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
VAMP4O75379 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VAMP4O75379 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
VAMP4O75379 RNU6-1309P-201ENST00000363305 108 ntBASIC4.43□□□□□ -1.7
VAMP4O75379 RNU6-196P-201ENST00000384315 107 ntBASIC4.43□□□□□ -1.7
VAMP4O75379 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
VAMP4O75379 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.43□□□□□ -1.7
VAMP4O75379 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.43□□□□□ -1.7
VAMP4O75379 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.43□□□□□ -1.7
VAMP4O75379 AL357552.1-201ENST00000445254 415 ntBASIC4.43□□□□□ -1.7
VAMP4O75379 AL360271.2-201ENST00000447710 161 ntBASIC4.43□□□□□ -1.7
VAMP4O75379 RPS15AP34-201ENST00000487776 387 ntBASIC4.43□□□□□ -1.7
VAMP4O75379 APOOP4-201ENST00000513530 597 ntBASIC4.43□□□□□ -1.7
VAMP4O75379 RNU6-470P-201ENST00000515954 104 ntBASIC4.43□□□□□ -1.7
VAMP4O75379 MIR2114-201ENST00000516645 80 ntBASIC4.43□□□□□ -1.7
VAMP4O75379 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.43□□□□□ -1.7
VAMP4O75379 AC008739.3-201ENST00000603262 127 ntBASIC4.43□□□□□ -1.7
VAMP4O75379 HMGN2P28-201ENST00000606102 262 ntBASIC4.43□□□□□ -1.7
VAMP4O75379 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.43□□□□□ -1.7
VAMP4O75379 AC138305.3-201ENST00000624988 240 ntBASIC4.43□□□□□ -1.7
VAMP4O75379 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
VAMP4O75379 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VAMP4O75379 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VAMP4O75379 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VAMP4O75379 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
VAMP4O75379 AC032011.1-201ENST00000611703 1549 ntBASIC4.42□□□□□ -1.7
VAMP4O75379 AC004925.1-201ENST00000624256 2706 ntBASIC4.42□□□□□ -1.7
VAMP4O75379 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
VAMP4O75379 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms