Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 USP9YP8-201ENST00000441913 500 ntBASIC2.83□□□□□ -1.96
PRKNO60260 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.83□□□□□ -1.96
PRKNO60260 RPS15AP27-201ENST00000449183 343 ntBASIC2.83□□□□□ -1.96
PRKNO60260 RPL23AP11-201ENST00000475260 469 ntBASIC2.83□□□□□ -1.96
PRKNO60260 AL160314.1-201ENST00000490836 438 ntBASIC2.83□□□□□ -1.96
PRKNO60260 AC010486.1-201ENST00000511793 424 ntBASIC2.83□□□□□ -1.96
PRKNO60260 LRRC34P2-201ENST00000514850 553 ntBASIC2.83□□□□□ -1.96
PRKNO60260 RNA5SP290-201ENST00000517133 127 ntBASIC2.83□□□□□ -1.96
PRKNO60260 BTF3P12-201ENST00000519620 469 ntBASIC2.83□□□□□ -1.96
PRKNO60260 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.83□□□□□ -1.96
PRKNO60260 AC106782.4-201ENST00000568264 210 ntBASIC2.83□□□□□ -1.96
PRKNO60260 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.83□□□□□ -1.96
PRKNO60260 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.83□□□□□ -1.96
PRKNO60260 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.83□□□□□ -1.96
PRKNO60260 AC011712.1-201ENST00000588959 234 ntBASIC2.83□□□□□ -1.96
PRKNO60260 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.83□□□□□ -1.96
PRKNO60260 AL357078.3-201ENST00000607528 618 ntBASIC2.83□□□□□ -1.96
PRKNO60260 AC107294.1-201ENST00000609524 467 ntBASIC2.83□□□□□ -1.96
PRKNO60260 AC063943.3-201ENST00000615562 356 ntBASIC2.83□□□□□ -1.96
PRKNO60260 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.83□□□□□ -1.96
PRKNO60260 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.83□□□□□ -1.96
PRKNO60260 Z99571.1-201ENST00000636677 394 ntBASIC2.83□□□□□ -1.96
PRKNO60260 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
PRKNO60260 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.83□□□□□ -1.96
PRKNO60260 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.83□□□□□ -1.96
PRKNO60260 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.83□□□□□ -1.96
PRKNO60260 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
PRKNO60260 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PRKNO60260 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.82□□□□□ -1.96
PRKNO60260 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
PRKNO60260 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.82□□□□□ -1.96
PRKNO60260 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.82□□□□□ -1.96
PRKNO60260 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
PRKNO60260 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
PRKNO60260 Y_RNA.72-201ENST00000362894 103 ntBASIC2.82□□□□□ -1.96
PRKNO60260 Y_RNA.245-201ENST00000364493 95 ntBASIC2.82□□□□□ -1.96
PRKNO60260 SNORA71.1-201ENST00000364523 117 ntBASIC2.82□□□□□ -1.96
PRKNO60260 Y_RNA.373-201ENST00000365600 103 ntBASIC2.82□□□□□ -1.96
PRKNO60260 Y_RNA.378-201ENST00000365652 113 ntBASIC2.82□□□□□ -1.96
PRKNO60260 Y_RNA.534-201ENST00000384599 112 ntBASIC2.82□□□□□ -1.96
PRKNO60260 SNORA48.8-201ENST00000391324 134 ntBASIC2.82□□□□□ -1.96
PRKNO60260 AL138885.1-201ENST00000405921 675 ntBASIC2.82□□□□□ -1.96
PRKNO60260 RAP1BP3-201ENST00000407180 549 ntBASIC2.82□□□□□ -1.96
PRKNO60260 AL591034.1-201ENST00000407447 340 ntBASIC2.82□□□□□ -1.96
PRKNO60260 RNU2-33P-201ENST00000410344 192 ntBASIC2.82□□□□□ -1.96
PRKNO60260 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.82□□□□□ -1.96
PRKNO60260 UBE2D3P2-201ENST00000424409 445 ntBASIC2.82□□□□□ -1.96
PRKNO60260 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.82□□□□□ -1.96
PRKNO60260 NDUFB4P6-201ENST00000436819 366 ntBASIC2.82□□□□□ -1.96
PRKNO60260 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.82□□□□□ -1.96
PRKNO60260 AC006539.3-201ENST00000454258 129 ntBASIC2.82□□□□□ -1.96
PRKNO60260 AL590639.1-201ENST00000456484 337 ntBASIC2.82□□□□□ -1.96
PRKNO60260 RPS23P3-201ENST00000470993 430 ntBASIC2.82□□□□□ -1.96
PRKNO60260 RPS15AP34-201ENST00000487776 387 ntBASIC2.82□□□□□ -1.96
PRKNO60260 HMGN1P12-201ENST00000499125 195 ntBASIC2.82□□□□□ -1.96
PRKNO60260 SUMO2P6-201ENST00000505273 288 ntBASIC2.82□□□□□ -1.96
PRKNO60260 AC091885.1-201ENST00000506658 268 ntBASIC2.82□□□□□ -1.96
PRKNO60260 Y_RNA.665-201ENST00000516177 98 ntBASIC2.82□□□□□ -1.96
PRKNO60260 RNA5SP291-201ENST00000517222 105 ntBASIC2.82□□□□□ -1.96
PRKNO60260 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
PRKNO60260 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.82□□□□□ -1.96
PRKNO60260 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.82□□□□□ -1.96
PRKNO60260 AC009994.1-201ENST00000606889 253 ntBASIC2.82□□□□□ -1.96
PRKNO60260 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.82□□□□□ -1.96
PRKNO60260 AC092807.2-201ENST00000609367 243 ntBASIC2.82□□□□□ -1.96
PRKNO60260 AC009570.1-201ENST00000609599 745 ntBASIC2.82□□□□□ -1.96
PRKNO60260 Y_RNA.804-201ENST00000615262 101 ntBASIC2.82□□□□□ -1.96
PRKNO60260 AC104260.1-201ENST00000616660 539 ntBASIC2.82□□□□□ -1.96
PRKNO60260 AL136221.1-201ENST00000621449 509 ntBASIC2.82□□□□□ -1.96
PRKNO60260 MTND1P37-201ENST00000636562 264 ntBASIC2.82□□□□□ -1.96
PRKNO60260 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.82□□□□□ -1.96
PRKNO60260 AL355596.1-201ENST00000565399 3996 ntBASIC2.82□□□□□ -1.96
PRKNO60260 MTND4P12-201ENST00000498999 1377 ntBASIC2.82□□□□□ -1.96
PRKNO60260 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.82□□□□□ -1.96
PRKNO60260 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.81□□□□□ -1.96
PRKNO60260 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
PRKNO60260 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
PRKNO60260 CBX3P1-201ENST00000325243 554 ntBASIC2.81□□□□□ -1.96
PRKNO60260 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.81□□□□□ -1.96
PRKNO60260 RNU6-715P-201ENST00000365204 103 ntBASIC2.81□□□□□ -1.96
PRKNO60260 SNORA4.3-201ENST00000365564 137 ntBASIC2.81□□□□□ -1.96
PRKNO60260 SNORA44-201ENST00000384584 132 ntBASIC2.81□□□□□ -1.96
PRKNO60260 SNORD70.1-201ENST00000391007 85 ntBASIC2.81□□□□□ -1.96
PRKNO60260 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
PRKNO60260 SNORA11.2-201ENST00000408318 127 ntBASIC2.81□□□□□ -1.96
PRKNO60260 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
PRKNO60260 RNU6-1148P-201ENST00000410992 104 ntBASIC2.81□□□□□ -1.96
PRKNO60260 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.81□□□□□ -1.96
PRKNO60260 RPL32P35-201ENST00000415214 394 ntBASIC2.81□□□□□ -1.96
PRKNO60260 AC009161.1-201ENST00000417306 376 ntBASIC2.81□□□□□ -1.96
PRKNO60260 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.81□□□□□ -1.96
PRKNO60260 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.81□□□□□ -1.96
PRKNO60260 RPL35AP12-201ENST00000425362 338 ntBASIC2.81□□□□□ -1.96
PRKNO60260 HIGD1AP11-201ENST00000438361 280 ntBASIC2.81□□□□□ -1.96
PRKNO60260 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.81□□□□□ -1.96
PRKNO60260 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.81□□□□□ -1.96
PRKNO60260 AC117440.1-201ENST00000474107 571 ntBASIC2.81□□□□□ -1.96
PRKNO60260 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.81□□□□□ -1.96
PRKNO60260 AC091951.2-201ENST00000500762 203 ntBASIC2.81□□□□□ -1.96
PRKNO60260 AC008549.1-201ENST00000512900 643 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms