Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 MIR4444-2-201ENST00000584390 74 ntBASIC1.31□□□□□ -2.2
SSNA1O43805 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.31□□□□□ -2.2
SSNA1O43805 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.31□□□□□ -2.2
SSNA1O43805 AC098614.4-201ENST00000607601 462 ntBASIC1.31□□□□□ -2.2
SSNA1O43805 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.31□□□□□ -2.2
SSNA1O43805 AC093788.1-201ENST00000609356 927 ntBASIC1.31□□□□□ -2.2
SSNA1O43805 Z82243.1-201ENST00000609432 473 ntBASIC1.31□□□□□ -2.2
SSNA1O43805 AC004908.3-201ENST00000610248 625 ntBASIC1.31□□□□□ -2.2
SSNA1O43805 AL158163.2-201ENST00000619110 700 ntBASIC1.31□□□□□ -2.2
SSNA1O43805 AC091965.5-201ENST00000624785 342 ntBASIC1.31□□□□□ -2.2
SSNA1O43805 AC243829.7-201ENST00000633081 225 ntBASIC1.31□□□□□ -2.2
SSNA1O43805 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
SSNA1O43805 TEX21P-201ENST00000447107 1476 ntBASIC1.31□□□□□ -2.2
SSNA1O43805 MTND5P33-201ENST00000571250 1450 ntBASIC1.31□□□□□ -2.2
SSNA1O43805 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
SSNA1O43805 RNU6-439P-201ENST00000384188 106 ntBASIC1.3□□□□□ -2.2
SSNA1O43805 MIR1304-201ENST00000408243 91 ntBASIC1.3□□□□□ -2.2
SSNA1O43805 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.3□□□□□ -2.2
SSNA1O43805 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.3□□□□□ -2.2
SSNA1O43805 AC007098.1-201ENST00000420122 367 ntBASIC1.3□□□□□ -2.2
SSNA1O43805 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.3□□□□□ -2.2
SSNA1O43805 HMGB1P18-201ENST00000438801 619 ntBASIC1.3□□□□□ -2.2
SSNA1O43805 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
SSNA1O43805 RPL23AP76-201ENST00000441860 458 ntBASIC1.3□□□□□ -2.2
SSNA1O43805 AL357134.1-201ENST00000445848 426 ntBASIC1.3□□□□□ -2.2
SSNA1O43805 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.3□□□□□ -2.2
SSNA1O43805 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.3□□□□□ -2.2
SSNA1O43805 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.3□□□□□ -2.2
SSNA1O43805 AC005908.1-201ENST00000468701 347 ntBASIC1.3□□□□□ -2.2
SSNA1O43805 AC109927.2-201ENST00000506416 303 ntBASIC1.3□□□□□ -2.2
SSNA1O43805 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.3□□□□□ -2.2
SSNA1O43805 TPT1P8-201ENST00000510120 555 ntBASIC1.3□□□□□ -2.2
SSNA1O43805 PTP4A1P4-201ENST00000512479 322 ntBASIC1.3□□□□□ -2.2
SSNA1O43805 SNORA44.1-201ENST00000517031 108 ntBASIC1.3□□□□□ -2.2
SSNA1O43805 RNU6-1028P-201ENST00000517164 93 ntBASIC1.3□□□□□ -2.2
SSNA1O43805 AP004607.1-201ENST00000524456 203 ntBASIC1.3□□□□□ -2.2
SSNA1O43805 AC009097.3-201ENST00000563557 1018 ntBASIC1.3□□□□□ -2.2
SSNA1O43805 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.3□□□□□ -2.2
SSNA1O43805 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.3□□□□□ -2.2
SSNA1O43805 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.3□□□□□ -2.2
SSNA1O43805 AC007179.3-201ENST00000604976 235 ntBASIC1.3□□□□□ -2.2
SSNA1O43805 AC006270.3-201ENST00000605967 1036 ntBASIC1.3□□□□□ -2.2
SSNA1O43805 AC096772.1-201ENST00000609146 564 ntBASIC1.3□□□□□ -2.2
SSNA1O43805 AL133445.2-201ENST00000611191 527 ntBASIC1.3□□□□□ -2.2
SSNA1O43805 AC099842.1-201ENST00000619919 596 ntBASIC1.3□□□□□ -2.2
SSNA1O43805 AP003485.1-201ENST00000625093 753 ntBASIC1.3□□□□□ -2.2
SSNA1O43805 AC090517.3-201ENST00000625170 141 ntBASIC1.3□□□□□ -2.2
SSNA1O43805 DDX43P2-201ENST00000604753 1354 ntBASIC1.3□□□□□ -2.2
SSNA1O43805 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
SSNA1O43805 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.29□□□□□ -2.2
SSNA1O43805 ZNF355P-201ENST00000427301 3216 ntBASIC1.29□□□□□ -2.2
SSNA1O43805 RNU6-288P-201ENST00000363690 104 ntBASIC1.29□□□□□ -2.2
SSNA1O43805 RNU6-611P-201ENST00000384276 104 ntBASIC1.29□□□□□ -2.2
SSNA1O43805 SNORA40.2-201ENST00000390847 128 ntBASIC1.29□□□□□ -2.2
SSNA1O43805 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC1.29□□□□□ -2.2
SSNA1O43805 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.29□□□□□ -2.2
SSNA1O43805 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.29□□□□□ -2.2
SSNA1O43805 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.29□□□□□ -2.2
SSNA1O43805 MTCO3P46-201ENST00000425787 232 ntBASIC1.29□□□□□ -2.2
SSNA1O43805 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
SSNA1O43805 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.29□□□□□ -2.2
SSNA1O43805 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.29□□□□□ -2.2
SSNA1O43805 AC245102.2-201ENST00000448956 180 ntBASIC1.29□□□□□ -2.2
SSNA1O43805 PAXBP1P1-201ENST00000449315 447 ntBASIC1.29□□□□□ -2.2
SSNA1O43805 RPS3AP22-201ENST00000488297 769 ntBASIC1.29□□□□□ -2.2
SSNA1O43805 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.29□□□□□ -2.2
SSNA1O43805 AC114781.4-201ENST00000513707 639 ntBASIC1.29□□□□□ -2.2
SSNA1O43805 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.29□□□□□ -2.2
SSNA1O43805 AP005597.4-201ENST00000526762 229 ntBASIC1.29□□□□□ -2.2
SSNA1O43805 AL136520.1-202ENST00000555494 763 ntBASIC1.29□□□□□ -2.2
SSNA1O43805 AC074050.1-201ENST00000563247 211 ntBASIC1.29□□□□□ -2.2
SSNA1O43805 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.29□□□□□ -2.2
SSNA1O43805 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.29□□□□□ -2.2
SSNA1O43805 BNIP3P27-201ENST00000599991 412 ntBASIC1.29□□□□□ -2.2
SSNA1O43805 AC135507.2-201ENST00000612443 309 ntBASIC1.29□□□□□ -2.2
SSNA1O43805 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.29□□□□□ -2.2
SSNA1O43805 AL132822.1-201ENST00000617063 513 ntBASIC1.29□□□□□ -2.2
SSNA1O43805 AC091304.6-201ENST00000619761 202 ntBASIC1.29□□□□□ -2.2
SSNA1O43805 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
SSNA1O43805 RNU1-58P-201ENST00000362413 163 ntBASIC1.28□□□□□ -2.2
SSNA1O43805 RNU6-546P-201ENST00000383991 107 ntBASIC1.28□□□□□ -2.2
SSNA1O43805 RNU6-701P-201ENST00000384059 107 ntBASIC1.28□□□□□ -2.2
SSNA1O43805 MIR186-201ENST00000384988 86 ntBASIC1.28□□□□□ -2.2
SSNA1O43805 MIR1284-201ENST00000408337 120 ntBASIC1.28□□□□□ -2.2
SSNA1O43805 AL135786.1-201ENST00000415892 214 ntBASIC1.28□□□□□ -2.2
SSNA1O43805 MTND4P3-201ENST00000417829 541 ntBASIC1.28□□□□□ -2.2
SSNA1O43805 AC138623.1-201ENST00000418060 216 ntBASIC1.28□□□□□ -2.2
SSNA1O43805 AL022400.1-201ENST00000423946 935 ntBASIC1.28□□□□□ -2.2
SSNA1O43805 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.28□□□□□ -2.2
SSNA1O43805 AC096638.1-201ENST00000444678 216 ntBASIC1.28□□□□□ -2.2
SSNA1O43805 AC092436.1-201ENST00000506450 503 ntBASIC1.28□□□□□ -2.2
SSNA1O43805 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
SSNA1O43805 AC008837.2-201ENST00000513076 418 ntBASIC1.28□□□□□ -2.2
SSNA1O43805 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.28□□□□□ -2.2
SSNA1O43805 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.28□□□□□ -2.2
SSNA1O43805 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.28□□□□□ -2.2
SSNA1O43805 MIR1273D-201ENST00000577266 86 ntBASIC1.28□□□□□ -2.2
SSNA1O43805 LARP7P3-201ENST00000579888 337 ntBASIC1.28□□□□□ -2.2
SSNA1O43805 AL358072.1-201ENST00000604156 575 ntBASIC1.28□□□□□ -2.2
SSNA1O43805 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms