Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AC003989.2-201ENST00000440224 169 ntBASIC1.58□□□□□ -2.16
SGCEO43556 ZNF886P-201ENST00000450781 723 ntBASIC1.58□□□□□ -2.16
SGCEO43556 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.58□□□□□ -2.16
SGCEO43556 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.58□□□□□ -2.16
SGCEO43556 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.58□□□□□ -2.16
SGCEO43556 RNU6-678P-201ENST00000516832 109 ntBASIC1.58□□□□□ -2.16
SGCEO43556 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC1.58□□□□□ -2.16
SGCEO43556 CBX3P4-201ENST00000538909 354 ntBASIC1.58□□□□□ -2.16
SGCEO43556 MIR4419B-201ENST00000577260 68 ntBASIC1.58□□□□□ -2.16
SGCEO43556 BNIP3P25-201ENST00000596023 559 ntBASIC1.58□□□□□ -2.16
SGCEO43556 AC090970.3-201ENST00000612566 866 ntBASIC1.58□□□□□ -2.16
SGCEO43556 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
SGCEO43556 MTND5P33-201ENST00000571250 1450 ntBASIC1.57□□□□□ -2.16
SGCEO43556 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
SGCEO43556 RNA5SP363-201ENST00000365072 115 ntBASIC1.57□□□□□ -2.16
SGCEO43556 Z98749.2-208ENST00000381646 500 ntBASIC1.57□□□□□ -2.16
SGCEO43556 USP9YP33-201ENST00000412220 421 ntBASIC1.57□□□□□ -2.16
SGCEO43556 USP9YP35-201ENST00000435696 412 ntBASIC1.57□□□□□ -2.16
SGCEO43556 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.57□□□□□ -2.16
SGCEO43556 EEF1E1P1-201ENST00000446998 430 ntBASIC1.57□□□□□ -2.16
SGCEO43556 AP000542.1-201ENST00000448473 371 ntBASIC1.57□□□□□ -2.16
SGCEO43556 RNA5SP216-201ENST00000516111 123 ntBASIC1.57□□□□□ -2.16
SGCEO43556 OR5B19P-201ENST00000531766 928 ntBASIC1.57□□□□□ -2.16
SGCEO43556 MIR3618-201ENST00000580330 88 ntBASIC1.57□□□□□ -2.16
SGCEO43556 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.57□□□□□ -2.16
SGCEO43556 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.57□□□□□ -2.16
SGCEO43556 BNIP3P9-201ENST00000603714 553 ntBASIC1.57□□□□□ -2.16
SGCEO43556 SEPT7P9-203ENST00000604116 343 ntBASIC1.57□□□□□ -2.16
SGCEO43556 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.57□□□□□ -2.16
SGCEO43556 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.57□□□□□ -2.16
SGCEO43556 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.57□□□□□ -2.16
SGCEO43556 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
SGCEO43556 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
SGCEO43556 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
SGCEO43556 RNU6-288P-201ENST00000363690 104 ntBASIC1.56□□□□□ -2.16
SGCEO43556 VN1R51P-201ENST00000411675 945 ntBASIC1.56□□□□□ -2.16
SGCEO43556 OR9R1P-201ENST00000412200 877 ntBASIC1.56□□□□□ -2.16
SGCEO43556 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.56□□□□□ -2.16
SGCEO43556 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.56□□□□□ -2.16
SGCEO43556 BTF3P15-201ENST00000455606 336 ntBASIC1.56□□□□□ -2.16
SGCEO43556 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.56□□□□□ -2.16
SGCEO43556 AC087884.1-201ENST00000469738 328 ntBASIC1.56□□□□□ -2.16
SGCEO43556 UBL5P3-201ENST00000475112 231 ntBASIC1.56□□□□□ -2.16
SGCEO43556 AC108729.1-201ENST00000487812 947 ntBASIC1.56□□□□□ -2.16
SGCEO43556 RPL39P36-201ENST00000490784 156 ntBASIC1.56□□□□□ -2.16
SGCEO43556 AC104685.1-201ENST00000502445 371 ntBASIC1.56□□□□□ -2.16
SGCEO43556 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.56□□□□□ -2.16
SGCEO43556 RNU6-64P-201ENST00000517119 105 ntBASIC1.56□□□□□ -2.16
SGCEO43556 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.56□□□□□ -2.16
SGCEO43556 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.56□□□□□ -2.16
SGCEO43556 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.56□□□□□ -2.16
SGCEO43556 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.56□□□□□ -2.16
SGCEO43556 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.56□□□□□ -2.16
SGCEO43556 ELOCP5-201ENST00000604924 333 ntBASIC1.56□□□□□ -2.16
SGCEO43556 AC021646.1-201ENST00000605469 484 ntBASIC1.56□□□□□ -2.16
SGCEO43556 AC006270.3-201ENST00000605967 1036 ntBASIC1.56□□□□□ -2.16
SGCEO43556 AC009318.2-201ENST00000610917 651 ntBASIC1.56□□□□□ -2.16
SGCEO43556 AC099654.9-201ENST00000637055 678 ntBASIC1.56□□□□□ -2.16
SGCEO43556 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SGCEO43556 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
SGCEO43556 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SGCEO43556 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SGCEO43556 SNORD114-19-201ENST00000363072 75 ntBASIC1.55□□□□□ -2.16
SGCEO43556 U8.3-201ENST00000363321 132 ntBASIC1.55□□□□□ -2.16
SGCEO43556 RNU6-777P-201ENST00000364265 104 ntBASIC1.55□□□□□ -2.16
SGCEO43556 MIR9-3-201ENST00000385084 90 ntBASIC1.55□□□□□ -2.16
SGCEO43556 MIR29C-201ENST00000385231 88 ntBASIC1.55□□□□□ -2.16
SGCEO43556 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
SGCEO43556 SNORA40.18-201ENST00000391200 128 ntBASIC1.55□□□□□ -2.16
SGCEO43556 AL591034.2-201ENST00000402839 359 ntBASIC1.55□□□□□ -2.16
SGCEO43556 AL133475.1-201ENST00000404414 305 ntBASIC1.55□□□□□ -2.16
SGCEO43556 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.55□□□□□ -2.16
SGCEO43556 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.55□□□□□ -2.16
SGCEO43556 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.55□□□□□ -2.16
SGCEO43556 USP9YP24-201ENST00000434374 697 ntBASIC1.55□□□□□ -2.16
SGCEO43556 MTCO1P27-201ENST00000448269 226 ntBASIC1.55□□□□□ -2.16
SGCEO43556 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.55□□□□□ -2.16
SGCEO43556 AC093752.1-206ENST00000511823 336 ntBASIC1.55□□□□□ -2.16
SGCEO43556 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.55□□□□□ -2.16
SGCEO43556 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.55□□□□□ -2.16
SGCEO43556 RNU6-572P-201ENST00000516724 80 ntBASIC1.55□□□□□ -2.16
SGCEO43556 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.55□□□□□ -2.16
SGCEO43556 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.55□□□□□ -2.16
SGCEO43556 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC1.55□□□□□ -2.16
SGCEO43556 MIR4713-201ENST00000582691 75 ntBASIC1.55□□□□□ -2.16
SGCEO43556 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.55□□□□□ -2.16
SGCEO43556 AC107952.2-201ENST00000606048 486 ntBASIC1.55□□□□□ -2.16
SGCEO43556 AC126118.1-201ENST00000607744 628 ntBASIC1.55□□□□□ -2.16
SGCEO43556 AC245297.2-201ENST00000610119 565 ntBASIC1.55□□□□□ -2.16
SGCEO43556 AC108479.2-201ENST00000617314 601 ntBASIC1.55□□□□□ -2.16
SGCEO43556 AP003476.1-201ENST00000623984 516 ntBASIC1.55□□□□□ -2.16
SGCEO43556 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.55□□□□□ -2.16
SGCEO43556 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.55□□□□□ -2.16
SGCEO43556 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.55□□□□□ -2.16
SGCEO43556 RNU1-23P-201ENST00000363361 144 ntBASIC1.54□□□□□ -2.16
SGCEO43556 RNU6-898P-201ENST00000365627 104 ntBASIC1.54□□□□□ -2.16
SGCEO43556 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.54□□□□□ -2.16
SGCEO43556 MIR1294-201ENST00000408503 142 ntBASIC1.54□□□□□ -2.16
SGCEO43556 RN7SKP266-201ENST00000410232 287 ntBASIC1.54□□□□□ -2.16
SGCEO43556 POLHP1-201ENST00000411806 470 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms