Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.57□□□□□ -2.16
COCHO43405 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.57□□□□□ -2.16
COCHO43405 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.57□□□□□ -2.16
COCHO43405 AC108729.3-201ENST00000513484 108 ntBASIC1.57□□□□□ -2.16
COCHO43405 SNORA31.24-201ENST00000517232 57 ntBASIC1.57□□□□□ -2.16
COCHO43405 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC1.57□□□□□ -2.16
COCHO43405 MIR5708-201ENST00000579723 85 ntBASIC1.57□□□□□ -2.16
COCHO43405 AL445435.1-201ENST00000604232 665 ntBASIC1.57□□□□□ -2.16
COCHO43405 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
COCHO43405 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.57□□□□□ -2.16
COCHO43405 AC138627.2-201ENST00000624202 601 ntBASIC1.57□□□□□ -2.16
COCHO43405 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
COCHO43405 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
COCHO43405 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
COCHO43405 AL589826.1-201ENST00000340697 249 ntBASIC1.56□□□□□ -2.16
COCHO43405 AC078974.1-201ENST00000411597 223 ntBASIC1.56□□□□□ -2.16
COCHO43405 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.56□□□□□ -2.16
COCHO43405 RPL36AP53-201ENST00000432891 316 ntBASIC1.56□□□□□ -2.16
COCHO43405 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.56□□□□□ -2.16
COCHO43405 RPS15AP36-201ENST00000492022 382 ntBASIC1.56□□□□□ -2.16
COCHO43405 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.56□□□□□ -2.16
COCHO43405 SNORA25.11-201ENST00000515935 105 ntBASIC1.56□□□□□ -2.16
COCHO43405 SNRPGP1-201ENST00000553864 222 ntBASIC1.56□□□□□ -2.16
COCHO43405 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.56□□□□□ -2.16
COCHO43405 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.56□□□□□ -2.16
COCHO43405 MIR3912-201ENST00000577566 105 ntBASIC1.56□□□□□ -2.16
COCHO43405 AP000776.1-201ENST00000530032 1663 ntBASIC1.55□□□□□ -2.16
COCHO43405 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
COCHO43405 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.55□□□□□ -2.16
COCHO43405 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
COCHO43405 RNU6-14P-201ENST00000384630 106 ntBASIC1.55□□□□□ -2.16
COCHO43405 MIR29C-201ENST00000385231 88 ntBASIC1.55□□□□□ -2.16
COCHO43405 RNA5SP465-201ENST00000391195 109 ntBASIC1.55□□□□□ -2.16
COCHO43405 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.55□□□□□ -2.16
COCHO43405 AL354695.1-201ENST00000427935 228 ntBASIC1.55□□□□□ -2.16
COCHO43405 IFNA20P-201ENST00000436840 528 ntBASIC1.55□□□□□ -2.16
COCHO43405 RPS15AP9-201ENST00000439856 381 ntBASIC1.55□□□□□ -2.16
COCHO43405 MTCYBP42-201ENST00000444653 1130 ntBASIC1.55□□□□□ -2.16
COCHO43405 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.55□□□□□ -2.16
COCHO43405 AC018868.1-201ENST00000491307 315 ntBASIC1.55□□□□□ -2.16
COCHO43405 AC104685.1-201ENST00000502445 371 ntBASIC1.55□□□□□ -2.16
COCHO43405 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.55□□□□□ -2.16
COCHO43405 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
COCHO43405 RNU6-390P-201ENST00000516259 103 ntBASIC1.55□□□□□ -2.16
COCHO43405 RNU6-970P-201ENST00000516312 107 ntBASIC1.55□□□□□ -2.16
COCHO43405 SNORA44.1-201ENST00000517031 108 ntBASIC1.55□□□□□ -2.16
COCHO43405 RN7SKP258-201ENST00000517151 304 ntBASIC1.55□□□□□ -2.16
COCHO43405 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.55□□□□□ -2.16
COCHO43405 AC093012.1-202ENST00000549403 582 ntBASIC1.55□□□□□ -2.16
COCHO43405 CYB5AP5-201ENST00000549779 389 ntBASIC1.55□□□□□ -2.16
COCHO43405 AC073544.2-201ENST00000601155 540 ntBASIC1.55□□□□□ -2.16
COCHO43405 AL713866.2-201ENST00000603579 219 ntBASIC1.55□□□□□ -2.16
COCHO43405 AC087045.1-201ENST00000605856 382 ntBASIC1.55□□□□□ -2.16
COCHO43405 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.55□□□□□ -2.16
COCHO43405 AC099842.1-201ENST00000619919 596 ntBASIC1.55□□□□□ -2.16
COCHO43405 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.55□□□□□ -2.16
COCHO43405 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
COCHO43405 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
COCHO43405 CDC27P3-201ENST00000635418 1910 ntBASIC1.54□□□□□ -2.16
COCHO43405 MIR1304-201ENST00000408243 91 ntBASIC1.54□□□□□ -2.16
COCHO43405 OR9R1P-201ENST00000412200 877 ntBASIC1.54□□□□□ -2.16
COCHO43405 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC1.54□□□□□ -2.16
COCHO43405 MRPS36P1-201ENST00000421291 307 ntBASIC1.54□□□□□ -2.16
COCHO43405 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.54□□□□□ -2.16
COCHO43405 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.54□□□□□ -2.16
COCHO43405 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.54□□□□□ -2.16
COCHO43405 AC092001.1-201ENST00000453012 261 ntBASIC1.54□□□□□ -2.16
COCHO43405 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.54□□□□□ -2.16
COCHO43405 AC034222.1-201ENST00000494052 532 ntBASIC1.54□□□□□ -2.16
COCHO43405 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.54□□□□□ -2.16
COCHO43405 AC093281.2-201ENST00000510153 597 ntBASIC1.54□□□□□ -2.16
COCHO43405 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.54□□□□□ -2.16
COCHO43405 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.54□□□□□ -2.16
COCHO43405 SUB1P3-201ENST00000564581 315 ntBASIC1.54□□□□□ -2.16
COCHO43405 AC010928.2-201ENST00000588017 287 ntBASIC1.54□□□□□ -2.16
COCHO43405 AC103810.8-201ENST00000607347 118 ntBASIC1.54□□□□□ -2.16
COCHO43405 AC023158.2-201ENST00000614876 543 ntBASIC1.54□□□□□ -2.16
COCHO43405 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.54□□□□□ -2.16
COCHO43405 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.54□□□□□ -2.16
COCHO43405 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
COCHO43405 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
COCHO43405 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.54□□□□□ -2.16
COCHO43405 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
COCHO43405 AC138393.1-203ENST00000327086 343 ntBASIC1.53□□□□□ -2.16
COCHO43405 RNA5SP363-201ENST00000365072 115 ntBASIC1.53□□□□□ -2.16
COCHO43405 RNU6-997P-201ENST00000384725 107 ntBASIC1.53□□□□□ -2.16
COCHO43405 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
COCHO43405 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
COCHO43405 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.53□□□□□ -2.16
COCHO43405 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.53□□□□□ -2.16
COCHO43405 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC1.53□□□□□ -2.16
COCHO43405 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.53□□□□□ -2.16
COCHO43405 FO393414.1-201ENST00000428697 1184 ntBASIC1.53□□□□□ -2.16
COCHO43405 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.53□□□□□ -2.16
COCHO43405 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.53□□□□□ -2.16
COCHO43405 AC112771.1-201ENST00000463581 102 ntBASIC1.53□□□□□ -2.16
COCHO43405 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.53□□□□□ -2.16
COCHO43405 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.53□□□□□ -2.16
COCHO43405 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.53□□□□□ -2.16
COCHO43405 AC093809.1-201ENST00000509155 340 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms