Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 MTCYBP23-201ENST00000558717 1102 ntBASIC1.18□□□□□ -2.22
SDCBPO00560 AC092447.10-201ENST00000620607 1652 ntBASIC1.18□□□□□ -2.22
SDCBPO00560 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.17□□□□□ -2.22
SDCBPO00560 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.17□□□□□ -2.22
SDCBPO00560 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
SDCBPO00560 RNU6-223P-201ENST00000362830 107 ntBASIC1.17□□□□□ -2.22
SDCBPO00560 SNORA25B-201ENST00000365507 128 ntBASIC1.17□□□□□ -2.22
SDCBPO00560 SNORA40.2-201ENST00000390847 128 ntBASIC1.17□□□□□ -2.22
SDCBPO00560 CISD1P1-201ENST00000393907 327 ntBASIC1.17□□□□□ -2.22
SDCBPO00560 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC1.17□□□□□ -2.22
SDCBPO00560 RPL21P24-201ENST00000413752 448 ntBASIC1.17□□□□□ -2.22
SDCBPO00560 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC1.17□□□□□ -2.22
SDCBPO00560 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.17□□□□□ -2.22
SDCBPO00560 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.17□□□□□ -2.22
SDCBPO00560 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.17□□□□□ -2.22
SDCBPO00560 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.17□□□□□ -2.22
SDCBPO00560 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.17□□□□□ -2.22
SDCBPO00560 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.17□□□□□ -2.22
SDCBPO00560 RPS15AP9-201ENST00000439856 381 ntBASIC1.17□□□□□ -2.22
SDCBPO00560 AL161788.1-201ENST00000441805 169 ntBASIC1.17□□□□□ -2.22
SDCBPO00560 HSPE1P24-201ENST00000450782 238 ntBASIC1.17□□□□□ -2.22
SDCBPO00560 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.17□□□□□ -2.22
SDCBPO00560 MTCYBP35-201ENST00000503630 1137 ntBASIC1.17□□□□□ -2.22
SDCBPO00560 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.17□□□□□ -2.22
SDCBPO00560 AC093809.1-201ENST00000509155 340 ntBASIC1.17□□□□□ -2.22
SDCBPO00560 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.17□□□□□ -2.22
SDCBPO00560 AC008837.2-201ENST00000513076 418 ntBASIC1.17□□□□□ -2.22
SDCBPO00560 RNU6-1183P-201ENST00000517054 60 ntBASIC1.17□□□□□ -2.22
SDCBPO00560 AC021451.1-201ENST00000523498 1129 ntBASIC1.17□□□□□ -2.22
SDCBPO00560 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.17□□□□□ -2.22
SDCBPO00560 AC005832.3-201ENST00000537929 631 ntBASIC1.17□□□□□ -2.22
SDCBPO00560 GNAI2P1-201ENST00000541815 315 ntBASIC1.17□□□□□ -2.22
SDCBPO00560 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.17□□□□□ -2.22
SDCBPO00560 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.17□□□□□ -2.22
SDCBPO00560 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.17□□□□□ -2.22
SDCBPO00560 AC060771.1-201ENST00000582031 164 ntBASIC1.17□□□□□ -2.22
SDCBPO00560 AC103987.3-201ENST00000582071 292 ntBASIC1.17□□□□□ -2.22
SDCBPO00560 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.17□□□□□ -2.22
SDCBPO00560 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.17□□□□□ -2.22
SDCBPO00560 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.17□□□□□ -2.22
SDCBPO00560 AC091057.3-201ENST00000602684 733 ntBASIC1.17□□□□□ -2.22
SDCBPO00560 AL645939.4-201ENST00000604495 135 ntBASIC1.17□□□□□ -2.22
SDCBPO00560 RPL21P136-201ENST00000605378 396 ntBASIC1.17□□□□□ -2.22
SDCBPO00560 NDUFA8P1-201ENST00000605525 367 ntBASIC1.17□□□□□ -2.22
SDCBPO00560 AC091304.6-201ENST00000619761 202 ntBASIC1.17□□□□□ -2.22
SDCBPO00560 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.17□□□□□ -2.22
SDCBPO00560 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
SDCBPO00560 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.17□□□□□ -2.22
SDCBPO00560 MIR126-201ENST00000362291 85 ntBASIC1.16□□□□□ -2.22
SDCBPO00560 U8.1-201ENST00000362843 134 ntBASIC1.16□□□□□ -2.22
SDCBPO00560 RNA5SP240-201ENST00000365355 128 ntBASIC1.16□□□□□ -2.22
SDCBPO00560 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.16□□□□□ -2.22
SDCBPO00560 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
SDCBPO00560 RNU6-1032P-201ENST00000384100 107 ntBASIC1.16□□□□□ -2.22
SDCBPO00560 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
SDCBPO00560 AL033519.2-201ENST00000403958 392 ntBASIC1.16□□□□□ -2.22
SDCBPO00560 AL359634.1-202ENST00000404721 284 ntBASIC1.16□□□□□ -2.22
SDCBPO00560 AL590084.1-201ENST00000407885 387 ntBASIC1.16□□□□□ -2.22
SDCBPO00560 RNU6-174P-201ENST00000410406 106 ntBASIC1.16□□□□□ -2.22
SDCBPO00560 AC078974.1-201ENST00000411597 223 ntBASIC1.16□□□□□ -2.22
SDCBPO00560 VN1R36P-201ENST00000414936 291 ntBASIC1.16□□□□□ -2.22
SDCBPO00560 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.16□□□□□ -2.22
SDCBPO00560 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.16□□□□□ -2.22
SDCBPO00560 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.16□□□□□ -2.22
SDCBPO00560 AL591806.2-201ENST00000433122 173 ntBASIC1.16□□□□□ -2.22
SDCBPO00560 GTF2IP3-201ENST00000433887 494 ntBASIC1.16□□□□□ -2.22
SDCBPO00560 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.16□□□□□ -2.22
SDCBPO00560 RPL23AP76-201ENST00000441860 458 ntBASIC1.16□□□□□ -2.22
SDCBPO00560 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.16□□□□□ -2.22
SDCBPO00560 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.16□□□□□ -2.22
SDCBPO00560 AC018437.1-201ENST00000492214 406 ntBASIC1.16□□□□□ -2.22
SDCBPO00560 RPL22P13-201ENST00000493291 347 ntBASIC1.16□□□□□ -2.22
SDCBPO00560 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.16□□□□□ -2.22
SDCBPO00560 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.16□□□□□ -2.22
SDCBPO00560 RNU1-92P-201ENST00000517017 135 ntBASIC1.16□□□□□ -2.22
SDCBPO00560 RNU6-1028P-201ENST00000517164 93 ntBASIC1.16□□□□□ -2.22
SDCBPO00560 AC079598.5-201ENST00000547460 117 ntBASIC1.16□□□□□ -2.22
SDCBPO00560 AL512347.1-201ENST00000566420 503 ntBASIC1.16□□□□□ -2.22
SDCBPO00560 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.16□□□□□ -2.22
SDCBPO00560 BNIP3P25-201ENST00000596023 559 ntBASIC1.16□□□□□ -2.22
SDCBPO00560 AL355598.1-201ENST00000604169 202 ntBASIC1.16□□□□□ -2.22
SDCBPO00560 AC103810.8-201ENST00000607347 118 ntBASIC1.16□□□□□ -2.22
SDCBPO00560 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.16□□□□□ -2.22
SDCBPO00560 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.16□□□□□ -2.22
SDCBPO00560 AC138627.2-201ENST00000624202 601 ntBASIC1.16□□□□□ -2.22
SDCBPO00560 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.16□□□□□ -2.22
SDCBPO00560 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.16□□□□□ -2.22
SDCBPO00560 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
SDCBPO00560 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
SDCBPO00560 RNU4-13P-201ENST00000364019 141 ntBASIC1.15□□□□□ -2.23
SDCBPO00560 AL021407.1-201ENST00000404531 386 ntBASIC1.15□□□□□ -2.23
SDCBPO00560 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.15□□□□□ -2.23
SDCBPO00560 TIMM9P2-201ENST00000419324 266 ntBASIC1.15□□□□□ -2.23
SDCBPO00560 AL953862.1-201ENST00000423016 168 ntBASIC1.15□□□□□ -2.23
SDCBPO00560 USP9YP24-201ENST00000434374 697 ntBASIC1.15□□□□□ -2.23
SDCBPO00560 RSU1P2-202ENST00000437884 485 ntBASIC1.15□□□□□ -2.23
SDCBPO00560 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.15□□□□□ -2.23
SDCBPO00560 AL357134.1-201ENST00000445848 426 ntBASIC1.15□□□□□ -2.23
SDCBPO00560 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.15□□□□□ -2.23
SDCBPO00560 CYP2C59P-201ENST00000457790 269 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms