Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC2.55□□□□□ -2
DDX39AO00148 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.55□□□□□ -2
DDX39AO00148 AC010099.3-201ENST00000423896 409 ntBASIC2.55□□□□□ -2
DDX39AO00148 AL139415.2-201ENST00000431968 163 ntBASIC2.55□□□□□ -2
DDX39AO00148 RPL23AP30-201ENST00000432419 501 ntBASIC2.55□□□□□ -2
DDX39AO00148 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.55□□□□□ -2
DDX39AO00148 RPS15AP9-201ENST00000439856 381 ntBASIC2.55□□□□□ -2
DDX39AO00148 MTND5P2-201ENST00000442927 1142 ntBASIC2.55□□□□□ -2
DDX39AO00148 AL591719.1-201ENST00000444669 744 ntBASIC2.55□□□□□ -2
DDX39AO00148 FABP5P13-201ENST00000452144 328 ntBASIC2.55□□□□□ -2
DDX39AO00148 AP000705.1-201ENST00000454567 350 ntBASIC2.55□□□□□ -2
DDX39AO00148 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.55□□□□□ -2
DDX39AO00148 MRPS33P3-201ENST00000513456 322 ntBASIC2.55□□□□□ -2
DDX39AO00148 Y_RNA.689-201ENST00000516589 107 ntBASIC2.55□□□□□ -2
DDX39AO00148 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.55□□□□□ -2
DDX39AO00148 MIR5697-201ENST00000578045 78 ntBASIC2.55□□□□□ -2
DDX39AO00148 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.55□□□□□ -2
DDX39AO00148 AL049779.4-201ENST00000604500 156 ntBASIC2.55□□□□□ -2
DDX39AO00148 SNORD14A-201ENST00000606526 91 ntBASIC2.55□□□□□ -2
DDX39AO00148 AL031775.1-201ENST00000607014 887 ntBASIC2.55□□□□□ -2
DDX39AO00148 MIR15A-201ENST00000607334 83 ntBASIC2.55□□□□□ -2
DDX39AO00148 RNU6-87P-201ENST00000607561 108 ntBASIC2.55□□□□□ -2
DDX39AO00148 AC004223.4-201ENST00000612426 332 ntBASIC2.55□□□□□ -2
DDX39AO00148 AC087241.4-201ENST00000612441 480 ntBASIC2.55□□□□□ -2
DDX39AO00148 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.55□□□□□ -2
DDX39AO00148 AC245884.12-201ENST00000615364 59 ntBASIC2.55□□□□□ -2
DDX39AO00148 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.55□□□□□ -2
DDX39AO00148 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.55□□□□□ -2
DDX39AO00148 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
DDX39AO00148 AC073343.1-201ENST00000328239 651 ntBASIC2.54□□□□□ -2
DDX39AO00148 SNORD56.2-201ENST00000363242 71 ntBASIC2.54□□□□□ -2
DDX39AO00148 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.54□□□□□ -2
DDX39AO00148 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.54□□□□□ -2
DDX39AO00148 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.54□□□□□ -2
DDX39AO00148 AC097463.2-201ENST00000421074 142 ntBASIC2.54□□□□□ -2
DDX39AO00148 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.54□□□□□ -2
DDX39AO00148 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.54□□□□□ -2
DDX39AO00148 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.54□□□□□ -2
DDX39AO00148 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.54□□□□□ -2
DDX39AO00148 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.54□□□□□ -2
DDX39AO00148 KLF3P2-201ENST00000465138 268 ntBASIC2.54□□□□□ -2
DDX39AO00148 MTCO2P29-201ENST00000465212 189 ntBASIC2.54□□□□□ -2
DDX39AO00148 AC008571.1-201ENST00000467232 300 ntBASIC2.54□□□□□ -2
DDX39AO00148 MRPL42P6-201ENST00000486397 371 ntBASIC2.54□□□□□ -2
DDX39AO00148 RPS3AP22-201ENST00000488297 769 ntBASIC2.54□□□□□ -2
DDX39AO00148 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.54□□□□□ -2
DDX39AO00148 AC018437.1-201ENST00000492214 406 ntBASIC2.54□□□□□ -2
DDX39AO00148 FAM92A1P2-202ENST00000504766 877 ntBASIC2.54□□□□□ -2
DDX39AO00148 RNU6-826P-201ENST00000516827 104 ntBASIC2.54□□□□□ -2
DDX39AO00148 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.54□□□□□ -2
DDX39AO00148 AC012213.3-201ENST00000577199 777 ntBASIC2.54□□□□□ -2
DDX39AO00148 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.54□□□□□ -2
DDX39AO00148 AC060766.3-201ENST00000591442 263 ntBASIC2.54□□□□□ -2
DDX39AO00148 AP002360.4-201ENST00000606980 481 ntBASIC2.54□□□□□ -2
DDX39AO00148 AC092140.2-201ENST00000618027 521 ntBASIC2.54□□□□□ -2
DDX39AO00148 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.54□□□□□ -2
DDX39AO00148 MIR6766-201ENST00000622641 72 ntBASIC2.54□□□□□ -2
DDX39AO00148 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.54□□□□□ -2
DDX39AO00148 ZNF271P-202ENST00000465539 1970 ntBASIC2.54□□□□□ -2
DDX39AO00148 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
DDX39AO00148 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.53□□□□□ -2
DDX39AO00148 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
DDX39AO00148 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.53□□□□□ -2
DDX39AO00148 RNU6-166P-201ENST00000384371 107 ntBASIC2.53□□□□□ -2
DDX39AO00148 MIR518D-201ENST00000385014 87 ntBASIC2.53□□□□□ -2
DDX39AO00148 MIR1261-201ENST00000408659 82 ntBASIC2.53□□□□□ -2
DDX39AO00148 AL353621.1-201ENST00000418219 243 ntBASIC2.53□□□□□ -2
DDX39AO00148 AC011233.1-201ENST00000422812 283 ntBASIC2.53□□□□□ -2
DDX39AO00148 EIF4EP4-201ENST00000424916 578 ntBASIC2.53□□□□□ -2
DDX39AO00148 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.53□□□□□ -2
DDX39AO00148 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.53□□□□□ -2
DDX39AO00148 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.53□□□□□ -2
DDX39AO00148 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.53□□□□□ -2
DDX39AO00148 IFNA11P-201ENST00000446352 526 ntBASIC2.53□□□□□ -2
DDX39AO00148 RPL7P12-201ENST00000446719 750 ntBASIC2.53□□□□□ -2
DDX39AO00148 AC009961.3-201ENST00000449832 765 ntBASIC2.53□□□□□ -2
DDX39AO00148 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.53□□□□□ -2
DDX39AO00148 ZNF114P1-201ENST00000453500 292 ntBASIC2.53□□□□□ -2
DDX39AO00148 AC011005.2-201ENST00000487324 359 ntBASIC2.53□□□□□ -2
DDX39AO00148 AC010587.1-201ENST00000505809 469 ntBASIC2.53□□□□□ -2
DDX39AO00148 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.53□□□□□ -2
DDX39AO00148 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
DDX39AO00148 SNORA25.11-201ENST00000515935 105 ntBASIC2.53□□□□□ -2
DDX39AO00148 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.53□□□□□ -2
DDX39AO00148 AP003122.4-201ENST00000530980 758 ntBASIC2.53□□□□□ -2
DDX39AO00148 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.53□□□□□ -2
DDX39AO00148 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.53□□□□□ -2
DDX39AO00148 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.53□□□□□ -2
DDX39AO00148 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.53□□□□□ -2
DDX39AO00148 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.53□□□□□ -2
DDX39AO00148 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.53□□□□□ -2
DDX39AO00148 AC138627.2-201ENST00000624202 601 ntBASIC2.53□□□□□ -2
DDX39AO00148 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.53□□□□□ -2.01
DDX39AO00148 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
DDX39AO00148 HSPA8P4-201ENST00000511877 1920 ntBASIC2.52□□□□□ -2.01
DDX39AO00148 RNU2-63P-201ENST00000410792 194 ntBASIC2.52□□□□□ -2.01
DDX39AO00148 AL135786.1-201ENST00000415892 214 ntBASIC2.52□□□□□ -2.01
DDX39AO00148 NPM1P11-201ENST00000417106 855 ntBASIC2.52□□□□□ -2.01
DDX39AO00148 AC009518.2-201ENST00000418056 731 ntBASIC2.52□□□□□ -2.01
DDX39AO00148 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms