Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 YWHAZP1-201ENST00000556286 722 ntBASIC0.4□□□□□ -2.35
CHKB-CPT1BH3BT56 MIR4444-1-201ENST00000581696 74 ntBASIC0.4□□□□□ -2.35
CHKB-CPT1BH3BT56 MIR4444-2-201ENST00000584390 74 ntBASIC0.4□□□□□ -2.35
CHKB-CPT1BH3BT56 AC002545.1-201ENST00000592511 181 ntBASIC0.4□□□□□ -2.35
CHKB-CPT1BH3BT56 AC112220.3-201ENST00000605502 502 ntBASIC0.4□□□□□ -2.35
CHKB-CPT1BH3BT56 Z82243.1-201ENST00000609432 473 ntBASIC0.4□□□□□ -2.35
CHKB-CPT1BH3BT56 OR4G3P-201ENST00000633500 913 ntBASIC0.4□□□□□ -2.35
CHKB-CPT1BH3BT56 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.39□□□□□ -2.35
CHKB-CPT1BH3BT56 U8.13-201ENST00000390842 128 ntBASIC0.39□□□□□ -2.35
CHKB-CPT1BH3BT56 RSL24D1P4-201ENST00000400938 484 ntBASIC0.39□□□□□ -2.35
CHKB-CPT1BH3BT56 RNU6-733P-201ENST00000410759 104 ntBASIC0.39□□□□□ -2.35
CHKB-CPT1BH3BT56 RPS12P24-201ENST00000412619 387 ntBASIC0.39□□□□□ -2.35
CHKB-CPT1BH3BT56 AL592310.1-201ENST00000414330 671 ntBASIC0.39□□□□□ -2.35
CHKB-CPT1BH3BT56 ELOCP14-201ENST00000428070 331 ntBASIC0.39□□□□□ -2.35
CHKB-CPT1BH3BT56 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC0.39□□□□□ -2.35
CHKB-CPT1BH3BT56 ELOCP7-201ENST00000439968 331 ntBASIC0.39□□□□□ -2.35
CHKB-CPT1BH3BT56 AL035666.1-201ENST00000446195 348 ntBASIC0.39□□□□□ -2.35
CHKB-CPT1BH3BT56 NDUFA5P7-201ENST00000452914 242 ntBASIC0.39□□□□□ -2.35
CHKB-CPT1BH3BT56 RPL32P14-201ENST00000463196 378 ntBASIC0.39□□□□□ -2.35
CHKB-CPT1BH3BT56 FAM92A1P2-202ENST00000504766 877 ntBASIC0.39□□□□□ -2.35
CHKB-CPT1BH3BT56 RNU6-889P-201ENST00000517189 103 ntBASIC0.39□□□□□ -2.35
CHKB-CPT1BH3BT56 CYCSP23-201ENST00000519781 313 ntBASIC0.39□□□□□ -2.35
CHKB-CPT1BH3BT56 AC027309.2-201ENST00000520566 192 ntBASIC0.39□□□□□ -2.35
CHKB-CPT1BH3BT56 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.39□□□□□ -2.35
CHKB-CPT1BH3BT56 ATP5F1P7-201ENST00000567330 760 ntBASIC0.39□□□□□ -2.35
CHKB-CPT1BH3BT56 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC0.39□□□□□ -2.35
CHKB-CPT1BH3BT56 MIR4513-201ENST00000581077 86 ntBASIC0.39□□□□□ -2.35
CHKB-CPT1BH3BT56 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC0.39□□□□□ -2.35
CHKB-CPT1BH3BT56 AL512598.1-201ENST00000610158 273 ntBASIC0.39□□□□□ -2.35
CHKB-CPT1BH3BT56 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.39□□□□□ -2.35
CHKB-CPT1BH3BT56 AL353770.2-201ENST00000620024 78 ntBASIC0.39□□□□□ -2.35
CHKB-CPT1BH3BT56 MTCO1P18-201ENST00000455518 1419 ntBASIC0.38□□□□□ -2.35
CHKB-CPT1BH3BT56 RNU4-82P-201ENST00000362443 140 ntBASIC0.38□□□□□ -2.35
CHKB-CPT1BH3BT56 SNORD114-1-201ENST00000362705 72 ntBASIC0.38□□□□□ -2.35
CHKB-CPT1BH3BT56 SNORD18A-201ENST00000363753 72 ntBASIC0.38□□□□□ -2.35
CHKB-CPT1BH3BT56 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
CHKB-CPT1BH3BT56 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC0.38□□□□□ -2.35
CHKB-CPT1BH3BT56 MIR608-201ENST00000384820 100 ntBASIC0.38□□□□□ -2.35
CHKB-CPT1BH3BT56 MIR92A1-201ENST00000385233 78 ntBASIC0.38□□□□□ -2.35
CHKB-CPT1BH3BT56 MRPL35P1-201ENST00000404272 572 ntBASIC0.38□□□□□ -2.35
CHKB-CPT1BH3BT56 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC0.38□□□□□ -2.35
CHKB-CPT1BH3BT56 MTND1P28-201ENST00000435623 950 ntBASIC0.38□□□□□ -2.35
CHKB-CPT1BH3BT56 UBE2V1P8-201ENST00000437166 265 ntBASIC0.38□□□□□ -2.35
CHKB-CPT1BH3BT56 RPL7P36-201ENST00000444633 681 ntBASIC0.38□□□□□ -2.35
CHKB-CPT1BH3BT56 RPL23AP35-201ENST00000451906 501 ntBASIC0.38□□□□□ -2.35
CHKB-CPT1BH3BT56 USP9YP34-201ENST00000453983 808 ntBASIC0.38□□□□□ -2.35
CHKB-CPT1BH3BT56 RN7SKP210-201ENST00000459176 261 ntBASIC0.38□□□□□ -2.35
CHKB-CPT1BH3BT56 MTCO1P31-201ENST00000506355 492 ntBASIC0.38□□□□□ -2.35
CHKB-CPT1BH3BT56 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.38□□□□□ -2.35
CHKB-CPT1BH3BT56 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.38□□□□□ -2.35
CHKB-CPT1BH3BT56 RNU6-678P-201ENST00000516832 109 ntBASIC0.38□□□□□ -2.35
CHKB-CPT1BH3BT56 RNA5SP290-201ENST00000517133 127 ntBASIC0.38□□□□□ -2.35
CHKB-CPT1BH3BT56 LARP7P2-201ENST00000575306 125 ntBASIC0.38□□□□□ -2.35
CHKB-CPT1BH3BT56 BPTFP1-201ENST00000579209 492 ntBASIC0.38□□□□□ -2.35
CHKB-CPT1BH3BT56 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC0.38□□□□□ -2.35
CHKB-CPT1BH3BT56 AL355598.1-201ENST00000604169 202 ntBASIC0.38□□□□□ -2.35
CHKB-CPT1BH3BT56 AC004853.1-201ENST00000604902 698 ntBASIC0.38□□□□□ -2.35
CHKB-CPT1BH3BT56 AL365204.3-201ENST00000612448 685 ntBASIC0.38□□□□□ -2.35
CHKB-CPT1BH3BT56 AC040896.1-201ENST00000613819 479 ntBASIC0.38□□□□□ -2.35
CHKB-CPT1BH3BT56 uc_338.12-201ENST00000616344 181 ntBASIC0.38□□□□□ -2.35
CHKB-CPT1BH3BT56 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.38□□□□□ -2.35
CHKB-CPT1BH3BT56 AC080188.3-201ENST00000624842 748 ntBASIC0.38□□□□□ -2.35
CHKB-CPT1BH3BT56 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC0.38□□□□□ -2.35
CHKB-CPT1BH3BT56 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
CHKB-CPT1BH3BT56 RNU6-112P-201ENST00000363599 104 ntBASIC0.37□□□□□ -2.35
CHKB-CPT1BH3BT56 SNORA7.1-201ENST00000363750 139 ntBASIC0.37□□□□□ -2.35
CHKB-CPT1BH3BT56 MIR19B1-201ENST00000384829 87 ntBASIC0.37□□□□□ -2.35
CHKB-CPT1BH3BT56 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
CHKB-CPT1BH3BT56 RNU4-26P-201ENST00000410270 107 ntBASIC0.37□□□□□ -2.35
CHKB-CPT1BH3BT56 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.37□□□□□ -2.35
CHKB-CPT1BH3BT56 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0.37□□□□□ -2.35
CHKB-CPT1BH3BT56 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC0.37□□□□□ -2.35
CHKB-CPT1BH3BT56 AC002381.1-201ENST00000447049 280 ntBASIC0.37□□□□□ -2.35
CHKB-CPT1BH3BT56 RPL30P1-201ENST00000488676 339 ntBASIC0.37□□□□□ -2.35
CHKB-CPT1BH3BT56 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.37□□□□□ -2.35
CHKB-CPT1BH3BT56 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.37□□□□□ -2.35
CHKB-CPT1BH3BT56 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC0.37□□□□□ -2.35
CHKB-CPT1BH3BT56 RNU6-703P-201ENST00000516946 107 ntBASIC0.37□□□□□ -2.35
CHKB-CPT1BH3BT56 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.37□□□□□ -2.35
CHKB-CPT1BH3BT56 AP000916.1-201ENST00000533869 835 ntBASIC0.37□□□□□ -2.35
CHKB-CPT1BH3BT56 AC084364.2-201ENST00000546924 395 ntBASIC0.37□□□□□ -2.35
CHKB-CPT1BH3BT56 AC015688.6-201ENST00000577737 104 ntBASIC0.37□□□□□ -2.35
CHKB-CPT1BH3BT56 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
CHKB-CPT1BH3BT56 AP003465.2-201ENST00000602571 373 ntBASIC0.37□□□□□ -2.35
CHKB-CPT1BH3BT56 MZT1P2-201ENST00000604387 248 ntBASIC0.37□□□□□ -2.35
CHKB-CPT1BH3BT56 FAM71BP1-201ENST00000604431 523 ntBASIC0.37□□□□□ -2.35
CHKB-CPT1BH3BT56 AC090970.3-201ENST00000612566 866 ntBASIC0.37□□□□□ -2.35
CHKB-CPT1BH3BT56 AL731566.2-201ENST00000618971 317 ntBASIC0.37□□□□□ -2.35
CHKB-CPT1BH3BT56 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC0.37□□□□□ -2.35
CHKB-CPT1BH3BT56 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC0.37□□□□□ -2.35
CHKB-CPT1BH3BT56 AC068205.3-201ENST00000636385 468 ntBASIC0.37□□□□□ -2.35
CHKB-CPT1BH3BT56 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
CHKB-CPT1BH3BT56 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
CHKB-CPT1BH3BT56 RNU6-619P-201ENST00000365146 108 ntBASIC0.36□□□□□ -2.35
CHKB-CPT1BH3BT56 RNU6-1065P-201ENST00000384513 106 ntBASIC0.36□□□□□ -2.35
CHKB-CPT1BH3BT56 RPL23AP32-201ENST00000395315 459 ntBASIC0.36□□□□□ -2.35
CHKB-CPT1BH3BT56 AL117342.1-201ENST00000404861 406 ntBASIC0.36□□□□□ -2.35
CHKB-CPT1BH3BT56 RNU2-32P-201ENST00000411193 191 ntBASIC0.36□□□□□ -2.35
CHKB-CPT1BH3BT56 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.36□□□□□ -2.35
CHKB-CPT1BH3BT56 AC019178.2-201ENST00000423595 505 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms