Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC068880.5-201ENST00000624331 290 ntBASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 MTND1P37-201ENST00000636562 264 ntBASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC241585.2-209ENST00000638217 143 ntBASIC2.12□□□□□ -2.07
TMX2-CTNND1H3BSU7 RNU6-1284P-201ENST00000363701 100 ntBASIC2.11□□□□□ -2.07
TMX2-CTNND1H3BSU7 RNA5SP138-201ENST00000365098 114 ntBASIC2.11□□□□□ -2.07
TMX2-CTNND1H3BSU7 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
TMX2-CTNND1H3BSU7 RN7SKP142-201ENST00000411236 328 ntBASIC2.11□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC007283.2-201ENST00000424739 197 ntBASIC2.11□□□□□ -2.07
TMX2-CTNND1H3BSU7 USP12PX-201ENST00000432383 1057 ntBASIC2.11□□□□□ -2.07
TMX2-CTNND1H3BSU7 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.11□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.11□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC092573.2-201ENST00000434546 243 ntBASIC2.11□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.11□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC018634.1-201ENST00000437554 401 ntBASIC2.11□□□□□ -2.07
TMX2-CTNND1H3BSU7 RPL22P17-201ENST00000438729 315 ntBASIC2.11□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.11□□□□□ -2.07
TMX2-CTNND1H3BSU7 CBWD4P-201ENST00000445695 655 ntBASIC2.11□□□□□ -2.07
TMX2-CTNND1H3BSU7 RPL23AP7-203ENST00000449021 469 ntBASIC2.11□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.11□□□□□ -2.07
TMX2-CTNND1H3BSU7 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.11□□□□□ -2.07
TMX2-CTNND1H3BSU7 RPL30P5-201ENST00000494923 336 ntBASIC2.11□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.11□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC091965.2-201ENST00000512324 613 ntBASIC2.11□□□□□ -2.07
TMX2-CTNND1H3BSU7 SCARNA16.3-201ENST00000516595 184 ntBASIC2.11□□□□□ -2.07
TMX2-CTNND1H3BSU7 RNU6-1220P-201ENST00000517126 108 ntBASIC2.11□□□□□ -2.07
TMX2-CTNND1H3BSU7 RN7SKP258-201ENST00000517151 304 ntBASIC2.11□□□□□ -2.07
TMX2-CTNND1H3BSU7 AP006587.4-201ENST00000526053 529 ntBASIC2.11□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC124947.2-202ENST00000552735 133 ntBASIC2.11□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.11□□□□□ -2.07
TMX2-CTNND1H3BSU7 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.11□□□□□ -2.07
TMX2-CTNND1H3BSU7 MIR3167-201ENST00000579623 85 ntBASIC2.11□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC087752.4-201ENST00000605911 462 ntBASIC2.11□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC025754.2-201ENST00000606491 432 ntBASIC2.11□□□□□ -2.07
TMX2-CTNND1H3BSU7 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.11□□□□□ -2.07
TMX2-CTNND1H3BSU7 SDR42E1P2-201ENST00000614861 481 ntBASIC2.11□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.11□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC009831.4-201ENST00000620744 325 ntBASIC2.11□□□□□ -2.07
TMX2-CTNND1H3BSU7 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.11□□□□□ -2.07
TMX2-CTNND1H3BSU7 TEX21P-201ENST00000447107 1476 ntBASIC2.11□□□□□ -2.07
TMX2-CTNND1H3BSU7 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.11□□□□□ -2.07
TMX2-CTNND1H3BSU7 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.11□□□□□ -2.07
TMX2-CTNND1H3BSU7 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC010680.1-201ENST00000590024 3590 ntBASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 MIRLET7G-201ENST00000362280 84 ntBASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 Y_RNA.553-201ENST00000384670 102 ntBASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 SNORA64-201ENST00000384674 134 ntBASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 MIR325-201ENST00000385260 98 ntBASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 SNORA40.3-201ENST00000390964 122 ntBASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 ZNF90P2-204ENST00000419323 1075 ntBASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC010153.1-201ENST00000432862 727 ntBASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC104850.1-201ENST00000435940 476 ntBASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 USP9YP15-201ENST00000442391 422 ntBASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 AL360221.1-201ENST00000445989 335 ntBASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC108059.3-201ENST00000456388 214 ntBASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 MTCO2P18-201ENST00000457151 658 ntBASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC010587.1-201ENST00000505809 469 ntBASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 RAC1P5-201ENST00000512182 576 ntBASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 RNU6-927P-201ENST00000516199 100 ntBASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 Y_RNA.695-201ENST00000516715 107 ntBASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 RNU6-548P-201ENST00000517083 115 ntBASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 AP002963.1-201ENST00000530590 184 ntBASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 RSL24D1P11-201ENST00000591045 491 ntBASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 DPPA3P3-201ENST00000603842 430 ntBASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC097065.2-201ENST00000608159 533 ntBASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC006338.1-201ENST00000618453 749 ntBASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 MTND5P29-201ENST00000458676 1807 ntBASIC2.1□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC007785.2-201ENST00000598627 1916 ntBASIC2.09□□□□□ -2.07
TMX2-CTNND1H3BSU7 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
TMX2-CTNND1H3BSU7 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
TMX2-CTNND1H3BSU7 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
TMX2-CTNND1H3BSU7 Y_RNA.51-201ENST00000362725 102 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms