Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
TRIM49D1C9J1S8 AC234778.2-201ENST00000566241 354 ntBASIC2.21□□□□□ -2.06
TRIM49D1C9J1S8 MYL12BP1-201ENST00000569826 507 ntBASIC2.21□□□□□ -2.06
TRIM49D1C9J1S8 AC024619.4-201ENST00000580924 316 ntBASIC2.21□□□□□ -2.06
TRIM49D1C9J1S8 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.21□□□□□ -2.06
TRIM49D1C9J1S8 Z84480.1-201ENST00000605131 311 ntBASIC2.21□□□□□ -2.06
TRIM49D1C9J1S8 AL021997.1-201ENST00000605757 193 ntBASIC2.21□□□□□ -2.06
TRIM49D1C9J1S8 AC092954.2-201ENST00000609103 430 ntBASIC2.21□□□□□ -2.06
TRIM49D1C9J1S8 AC107294.1-201ENST00000609524 467 ntBASIC2.21□□□□□ -2.06
TRIM49D1C9J1S8 AC011939.3-201ENST00000613686 466 ntBASIC2.21□□□□□ -2.06
TRIM49D1C9J1S8 SDR42E1P2-201ENST00000614861 481 ntBASIC2.21□□□□□ -2.06
TRIM49D1C9J1S8 AC034102.8-201ENST00000615146 484 ntBASIC2.21□□□□□ -2.06
TRIM49D1C9J1S8 AC068792.1-201ENST00000621354 417 ntBASIC2.21□□□□□ -2.06
TRIM49D1C9J1S8 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.21□□□□□ -2.06
TRIM49D1C9J1S8 AL157786.1-207ENST00000627771 695 ntBASIC2.21□□□□□ -2.06
TRIM49D1C9J1S8 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.21□□□□□ -2.06
TRIM49D1C9J1S8 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.21□□□□□ -2.06
TRIM49D1C9J1S8 RNU6-181P-201ENST00000363225 107 ntBASIC2.2□□□□□ -2.06
TRIM49D1C9J1S8 RNU6-288P-201ENST00000363690 104 ntBASIC2.2□□□□□ -2.06
TRIM49D1C9J1S8 RNU6-270P-201ENST00000364131 105 ntBASIC2.2□□□□□ -2.06
TRIM49D1C9J1S8 U3.12-201ENST00000364498 214 ntBASIC2.2□□□□□ -2.06
TRIM49D1C9J1S8 Y_RNA.367-201ENST00000365544 101 ntBASIC2.2□□□□□ -2.06
TRIM49D1C9J1S8 RNU5E-6P-201ENST00000365574 115 ntBASIC2.2□□□□□ -2.06
TRIM49D1C9J1S8 Y_RNA.372-201ENST00000365599 102 ntBASIC2.2□□□□□ -2.06
TRIM49D1C9J1S8 SNORA67.4-201ENST00000384688 142 ntBASIC2.2□□□□□ -2.06
TRIM49D1C9J1S8 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
TRIM49D1C9J1S8 TXNP7-201ENST00000406296 293 ntBASIC2.2□□□□□ -2.06
TRIM49D1C9J1S8 SNORA11.2-201ENST00000408318 127 ntBASIC2.2□□□□□ -2.06
TRIM49D1C9J1S8 UBE2V1P10-201ENST00000414685 269 ntBASIC2.2□□□□□ -2.06
TRIM49D1C9J1S8 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.2□□□□□ -2.06
TRIM49D1C9J1S8 AC073614.1-201ENST00000438690 650 ntBASIC2.2□□□□□ -2.06
TRIM49D1C9J1S8 DNAJC19P4-201ENST00000440115 345 ntBASIC2.2□□□□□ -2.06
TRIM49D1C9J1S8 AC020550.1-201ENST00000447385 163 ntBASIC2.2□□□□□ -2.06
TRIM49D1C9J1S8 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.2□□□□□ -2.06
TRIM49D1C9J1S8 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.2□□□□□ -2.06
TRIM49D1C9J1S8 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.2□□□□□ -2.06
TRIM49D1C9J1S8 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.2□□□□□ -2.06
TRIM49D1C9J1S8 snoU109.1-201ENST00000459339 135 ntBASIC2.2□□□□□ -2.06
TRIM49D1C9J1S8 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.2□□□□□ -2.06
TRIM49D1C9J1S8 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.2□□□□□ -2.06
TRIM49D1C9J1S8 AC008716.1-201ENST00000511084 513 ntBASIC2.2□□□□□ -2.06
TRIM49D1C9J1S8 AC091133.4-201ENST00000511142 308 ntBASIC2.2□□□□□ -2.06
TRIM49D1C9J1S8 AC114781.4-201ENST00000513707 639 ntBASIC2.2□□□□□ -2.06
TRIM49D1C9J1S8 RNU6-928P-201ENST00000516876 104 ntBASIC2.2□□□□□ -2.06
TRIM49D1C9J1S8 RNU6-445P-201ENST00000516949 107 ntBASIC2.2□□□□□ -2.06
TRIM49D1C9J1S8 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
TRIM49D1C9J1S8 FAM92A1P1-201ENST00000528023 890 ntBASIC2.2□□□□□ -2.06
TRIM49D1C9J1S8 AC016957.1-201ENST00000534895 309 ntBASIC2.2□□□□□ -2.06
TRIM49D1C9J1S8 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.2□□□□□ -2.06
TRIM49D1C9J1S8 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.2□□□□□ -2.06
TRIM49D1C9J1S8 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.2□□□□□ -2.06
TRIM49D1C9J1S8 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.2□□□□□ -2.06
TRIM49D1C9J1S8 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.2□□□□□ -2.06
TRIM49D1C9J1S8 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.2□□□□□ -2.06
TRIM49D1C9J1S8 LRRC37A5P-203ENST00000580181 585 ntBASIC2.2□□□□□ -2.06
TRIM49D1C9J1S8 AL359999.1-201ENST00000604513 294 ntBASIC2.2□□□□□ -2.06
TRIM49D1C9J1S8 AC104073.3-201ENST00000610942 955 ntBASIC2.2□□□□□ -2.06
TRIM49D1C9J1S8 AC130324.3-201ENST00000614165 542 ntBASIC2.2□□□□□ -2.06
TRIM49D1C9J1S8 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.2□□□□□ -2.06
TRIM49D1C9J1S8 AC138649.3-201ENST00000622154 254 ntBASIC2.2□□□□□ -2.06
TRIM49D1C9J1S8 AC093648.1-201ENST00000623546 606 ntBASIC2.2□□□□□ -2.06
TRIM49D1C9J1S8 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.2□□□□□ -2.06
TRIM49D1C9J1S8 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
TRIM49D1C9J1S8 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.19□□□□□ -2.06
TRIM49D1C9J1S8 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
TRIM49D1C9J1S8 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
TRIM49D1C9J1S8 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.19□□□□□ -2.06
TRIM49D1C9J1S8 FARSBP1-201ENST00000435808 1778 ntBASIC2.19□□□□□ -2.06
TRIM49D1C9J1S8 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.19□□□□□ -2.06
TRIM49D1C9J1S8 RNY4P24-201ENST00000362735 96 ntBASIC2.19□□□□□ -2.06
TRIM49D1C9J1S8 SET-203ENST00000372688 801 ntTSL 2 BASIC2.19□□□□□ -2.06
TRIM49D1C9J1S8 MIR221-201ENST00000385135 110 ntBASIC2.19□□□□□ -2.06
TRIM49D1C9J1S8 CALM2P3-201ENST00000400429 449 ntBASIC2.19□□□□□ -2.06
TRIM49D1C9J1S8 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.19□□□□□ -2.06
TRIM49D1C9J1S8 MTND1P21-201ENST00000412991 285 ntBASIC2.19□□□□□ -2.06
TRIM49D1C9J1S8 MTND1P23-201ENST00000416931 372 ntBASIC2.19□□□□□ -2.06
TRIM49D1C9J1S8 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
TRIM49D1C9J1S8 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.19□□□□□ -2.06
TRIM49D1C9J1S8 MTCO2P19-201ENST00000427513 598 ntBASIC2.19□□□□□ -2.06
TRIM49D1C9J1S8 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.19□□□□□ -2.06
TRIM49D1C9J1S8 SUMO1P4-201ENST00000429430 302 ntBASIC2.19□□□□□ -2.06
TRIM49D1C9J1S8 ARPC3P1-201ENST00000437218 533 ntBASIC2.19□□□□□ -2.06
TRIM49D1C9J1S8 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.19□□□□□ -2.06
TRIM49D1C9J1S8 RPS15AP7-201ENST00000439294 405 ntBASIC2.19□□□□□ -2.06
TRIM49D1C9J1S8 PIGFP3-201ENST00000441918 722 ntBASIC2.19□□□□□ -2.06
TRIM49D1C9J1S8 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.19□□□□□ -2.06
TRIM49D1C9J1S8 AC108059.3-201ENST00000456388 214 ntBASIC2.19□□□□□ -2.06
TRIM49D1C9J1S8 AL162395.1-201ENST00000457882 422 ntBASIC2.19□□□□□ -2.06
TRIM49D1C9J1S8 AC092798.1-201ENST00000458542 409 ntBASIC2.19□□□□□ -2.06
TRIM49D1C9J1S8 RPL23AP41-201ENST00000484754 458 ntBASIC2.19□□□□□ -2.06
TRIM49D1C9J1S8 RPL9P6-201ENST00000492764 598 ntBASIC2.19□□□□□ -2.06
TRIM49D1C9J1S8 AC090255.1-201ENST00000495779 349 ntBASIC2.19□□□□□ -2.06
TRIM49D1C9J1S8 SUMO2P6-201ENST00000505273 288 ntBASIC2.19□□□□□ -2.06
TRIM49D1C9J1S8 RBBP4P6-201ENST00000508098 202 ntBASIC2.19□□□□□ -2.06
TRIM49D1C9J1S8 Vault.3-201ENST00000516676 95 ntBASIC2.19□□□□□ -2.06
TRIM49D1C9J1S8 IGLV3-17-201ENST00000519099 244 ntBASIC2.19□□□□□ -2.06
TRIM49D1C9J1S8 AK6P1-201ENST00000540219 478 ntBASIC2.19□□□□□ -2.06
TRIM49D1C9J1S8 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.19□□□□□ -2.06
TRIM49D1C9J1S8 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.19□□□□□ -2.06
TRIM49D1C9J1S8 AC009163.5-201ENST00000575421 637 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms