Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 Y_RNA.476-201ENST00000384347 108 ntBASIC0.34□□□□□ -2.36
COL6A5A8TX70 CCNG1P1-201ENST00000406783 885 ntBASIC0.34□□□□□ -2.36
COL6A5A8TX70 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC0.34□□□□□ -2.36
COL6A5A8TX70 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC0.34□□□□□ -2.36
COL6A5A8TX70 RNU6-45P-201ENST00000384471 107 ntBASIC0.34□□□□□ -2.36
COL6A5A8TX70 OFD1P18Y-201ENST00000420889 959 ntBASIC0.34□□□□□ -2.36
COL6A5A8TX70 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC0.34□□□□□ -2.36
COL6A5A8TX70 SNORD124-201ENST00000459577 104 ntBASIC0.34□□□□□ -2.36
COL6A5A8TX70 SNORA31.13-201ENST00000516624 135 ntBASIC0.34□□□□□ -2.36
COL6A5A8TX70 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC0.34□□□□□ -2.36
COL6A5A8TX70 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC0.34□□□□□ -2.36
COL6A5A8TX70 MTCO2P22-201ENST00000603246 681 ntBASIC0.34□□□□□ -2.36
COL6A5A8TX70 Y_RNA.778-201ENST00000620203 90 ntBASIC0.34□□□□□ -2.36
COL6A5A8TX70 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC0.34□□□□□ -2.36
COL6A5A8TX70 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
COL6A5A8TX70 RNU6-302P-201ENST00000365249 107 ntBASIC0.33□□□□□ -2.36
COL6A5A8TX70 RN7SKP158-201ENST00000410453 326 ntBASIC0.33□□□□□ -2.36
COL6A5A8TX70 PIGPP2-201ENST00000411569 458 ntBASIC0.33□□□□□ -2.36
COL6A5A8TX70 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.33□□□□□ -2.36
COL6A5A8TX70 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.33□□□□□ -2.36
COL6A5A8TX70 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC0.33□□□□□ -2.36
COL6A5A8TX70 RNU6-775P-201ENST00000459318 96 ntBASIC0.33□□□□□ -2.36
COL6A5A8TX70 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC0.33□□□□□ -2.36
COL6A5A8TX70 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.33□□□□□ -2.36
COL6A5A8TX70 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC0.33□□□□□ -2.36
COL6A5A8TX70 AC004832.4-201ENST00000608952 331 ntBASIC0.33□□□□□ -2.36
COL6A5A8TX70 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC0.33□□□□□ -2.36
COL6A5A8TX70 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.33□□□□□ -2.36
COL6A5A8TX70 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
COL6A5A8TX70 MIR1285-2-201ENST00000408311 88 ntBASIC0.33□□□□□ -2.36
COL6A5A8TX70 SEPT2P1-201ENST00000419651 180 ntBASIC0.33□□□□□ -2.36
COL6A5A8TX70 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.33□□□□□ -2.36
COL6A5A8TX70 PRELID3BP1-201ENST00000457142 540 ntBASIC0.33□□□□□ -2.36
COL6A5A8TX70 AC093027.1-201ENST00000546698 429 ntBASIC0.33□□□□□ -2.36
COL6A5A8TX70 MIR4645-201ENST00000583158 77 ntBASIC0.33□□□□□ -2.36
COL6A5A8TX70 AC073410.2-201ENST00000603240 332 ntBASIC0.33□□□□□ -2.36
COL6A5A8TX70 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC0.33□□□□□ -2.36
COL6A5A8TX70 AC083865.1-201ENST00000636634 831 ntBASIC0.33□□□□□ -2.36
COL6A5A8TX70 MIR26B-201ENST00000362251 77 ntBASIC0.32□□□□□ -2.36
COL6A5A8TX70 Y_RNA.428-201ENST00000384078 102 ntBASIC0.32□□□□□ -2.36
COL6A5A8TX70 MTCO1P56-201ENST00000401674 224 ntBASIC0.32□□□□□ -2.36
COL6A5A8TX70 AL356320.2-201ENST00000417263 507 ntBASIC0.32□□□□□ -2.36
COL6A5A8TX70 RPL37P21-201ENST00000435890 276 ntBASIC0.32□□□□□ -2.36
COL6A5A8TX70 AC241584.1-201ENST00000438469 1241 ntBASIC0.32□□□□□ -2.36
COL6A5A8TX70 AC092393.1-201ENST00000439625 742 ntBASIC0.32□□□□□ -2.36
COL6A5A8TX70 RPL31P20-201ENST00000449593 360 ntBASIC0.32□□□□□ -2.36
COL6A5A8TX70 RNU6-1037P-201ENST00000459571 107 ntBASIC0.32□□□□□ -2.36
COL6A5A8TX70 AL049830.1-201ENST00000468034 425 ntBASIC0.32□□□□□ -2.36
COL6A5A8TX70 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.32□□□□□ -2.36
COL6A5A8TX70 RPL23AP54-201ENST00000495129 419 ntBASIC0.32□□□□□ -2.36
COL6A5A8TX70 SNORA31.18-201ENST00000517043 134 ntBASIC0.32□□□□□ -2.36
COL6A5A8TX70 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.32□□□□□ -2.36
COL6A5A8TX70 MIR4441-201ENST00000582623 100 ntBASIC0.32□□□□□ -2.36
COL6A5A8TX70 AC087821.2-201ENST00000637086 450 ntBASIC0.32□□□□□ -2.36
COL6A5A8TX70 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
COL6A5A8TX70 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.32□□□□□ -2.36
COL6A5A8TX70 RNU6-833P-201ENST00000363486 107 ntBASIC0.32□□□□□ -2.36
COL6A5A8TX70 RNU6-160P-201ENST00000384591 107 ntBASIC0.32□□□□□ -2.36
COL6A5A8TX70 RNU6-939P-201ENST00000384634 107 ntBASIC0.32□□□□□ -2.36
COL6A5A8TX70 BTF3L4P2-201ENST00000392798 346 ntBASIC0.32□□□□□ -2.36
COL6A5A8TX70 RPS3AP24-201ENST00000407896 734 ntBASIC0.32□□□□□ -2.36
COL6A5A8TX70 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.32□□□□□ -2.36
COL6A5A8TX70 PAXBP1P1-201ENST00000449315 447 ntBASIC0.32□□□□□ -2.36
COL6A5A8TX70 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.32□□□□□ -2.36
COL6A5A8TX70 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.32□□□□□ -2.36
COL6A5A8TX70 AC118273.2-201ENST00000532092 465 ntBASIC0.32□□□□□ -2.36
COL6A5A8TX70 VN1R82P-201ENST00000601481 356 ntBASIC0.32□□□□□ -2.36
COL6A5A8TX70 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.31□□□□□ -2.36
COL6A5A8TX70 HMGN2P22-201ENST00000427588 175 ntBASIC0.31□□□□□ -2.36
COL6A5A8TX70 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC0.31□□□□□ -2.36
COL6A5A8TX70 AC134050.1-201ENST00000495088 933 ntBASIC0.31□□□□□ -2.36
COL6A5A8TX70 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC0.31□□□□□ -2.36
COL6A5A8TX70 AL158211.1-201ENST00000566763 763 ntBASIC0.31□□□□□ -2.36
COL6A5A8TX70 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC0.31□□□□□ -2.36
COL6A5A8TX70 NIFKP6-201ENST00000598115 845 ntBASIC0.31□□□□□ -2.36
COL6A5A8TX70 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.31□□□□□ -2.36
COL6A5A8TX70 AL590282.1-201ENST00000610379 1136 ntBASIC0.31□□□□□ -2.36
COL6A5A8TX70 uc_338.6-201ENST00000613544 171 ntBASIC0.31□□□□□ -2.36
COL6A5A8TX70 AC090132.2-201ENST00000615881 347 ntBASIC0.31□□□□□ -2.36
COL6A5A8TX70 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
COL6A5A8TX70 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.31□□□□□ -2.36
COL6A5A8TX70 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC0.31□□□□□ -2.36
COL6A5A8TX70 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.31□□□□□ -2.36
COL6A5A8TX70 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC0.31□□□□□ -2.36
COL6A5A8TX70 AC090142.3-201ENST00000519012 385 ntBASIC0.31□□□□□ -2.36
COL6A5A8TX70 OR8K4P-201ENST00000534608 872 ntBASIC0.31□□□□□ -2.36
COL6A5A8TX70 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC0.31□□□□□ -2.36
COL6A5A8TX70 MTND2P13-201ENST00000577438 1039 ntBASIC0.31□□□□□ -2.36
COL6A5A8TX70 MIR5571-201ENST00000577998 113 ntBASIC0.31□□□□□ -2.36
COL6A5A8TX70 OR1M4P-201ENST00000589199 287 ntBASIC0.31□□□□□ -2.36
COL6A5A8TX70 HSPE1P19-201ENST00000603327 295 ntBASIC0.31□□□□□ -2.36
COL6A5A8TX70 AL450336.1-201ENST00000605180 586 ntBASIC0.31□□□□□ -2.36
COL6A5A8TX70 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.3□□□□□ -2.36
COL6A5A8TX70 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.3□□□□□ -2.36
COL6A5A8TX70 AC112518.2-201ENST00000508565 425 ntBASIC0.3□□□□□ -2.36
COL6A5A8TX70 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
COL6A5A8TX70 AC012414.6-201ENST00000568241 401 ntBASIC0.3□□□□□ -2.36
COL6A5A8TX70 AC131280.1-202ENST00000624067 4211 ntBASIC0.3□□□□□ -2.36
COL6A5A8TX70 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
COL6A5A8TX70 Y_RNA.181-201ENST00000363872 101 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms