Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
LINC01558Q9Y6Z2 RNU1-39P-201ENST00000383897 165 ntBASIC0.35□□□□□ -2.35
LINC01558Q9Y6Z2 MIR608-201ENST00000384820 100 ntBASIC0.35□□□□□ -2.35
LINC01558Q9Y6Z2 MIR92A1-201ENST00000385233 78 ntBASIC0.35□□□□□ -2.35
LINC01558Q9Y6Z2 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
LINC01558Q9Y6Z2 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.35□□□□□ -2.35
LINC01558Q9Y6Z2 MTND2P21-201ENST00000436242 1042 ntBASIC0.35□□□□□ -2.35
LINC01558Q9Y6Z2 AL929288.2-201ENST00000446368 407 ntBASIC0.35□□□□□ -2.35
LINC01558Q9Y6Z2 RPS27P1-201ENST00000450552 247 ntBASIC0.35□□□□□ -2.35
LINC01558Q9Y6Z2 OR2AQ1P-201ENST00000451972 200 ntBASIC0.35□□□□□ -2.35
LINC01558Q9Y6Z2 CECR9-201ENST00000453421 199 ntBASIC0.35□□□□□ -2.35
LINC01558Q9Y6Z2 RPL30P9-201ENST00000465586 330 ntBASIC0.35□□□□□ -2.35
LINC01558Q9Y6Z2 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.35□□□□□ -2.35
LINC01558Q9Y6Z2 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.35□□□□□ -2.35
LINC01558Q9Y6Z2 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.35□□□□□ -2.35
LINC01558Q9Y6Z2 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.35□□□□□ -2.35
LINC01558Q9Y6Z2 YWHAEP4-201ENST00000505390 198 ntBASIC0.35□□□□□ -2.35
LINC01558Q9Y6Z2 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.35□□□□□ -2.35
LINC01558Q9Y6Z2 AC114781.4-201ENST00000513707 639 ntBASIC0.35□□□□□ -2.35
LINC01558Q9Y6Z2 RNU6-528P-201ENST00000516926 100 ntBASIC0.35□□□□□ -2.35
LINC01558Q9Y6Z2 AP003392.2-201ENST00000527269 208 ntBASIC0.35□□□□□ -2.35
LINC01558Q9Y6Z2 AC106785.1-201ENST00000565935 262 ntBASIC0.35□□□□□ -2.35
LINC01558Q9Y6Z2 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.35□□□□□ -2.35
LINC01558Q9Y6Z2 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC0.35□□□□□ -2.35
LINC01558Q9Y6Z2 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC0.35□□□□□ -2.35
LINC01558Q9Y6Z2 AC098826.3-201ENST00000603823 466 ntBASIC0.35□□□□□ -2.35
LINC01558Q9Y6Z2 MZT1P2-201ENST00000604387 248 ntBASIC0.35□□□□□ -2.35
LINC01558Q9Y6Z2 AC004908.3-201ENST00000610248 625 ntBASIC0.35□□□□□ -2.35
LINC01558Q9Y6Z2 AC084824.5-201ENST00000612009 413 ntBASIC0.35□□□□□ -2.35
LINC01558Q9Y6Z2 MIR7106-201ENST00000612419 65 ntBASIC0.35□□□□□ -2.35
LINC01558Q9Y6Z2 AL365204.3-201ENST00000612448 685 ntBASIC0.35□□□□□ -2.35
LINC01558Q9Y6Z2 LINC00216-201ENST00000623548 1126 ntBASIC0.35□□□□□ -2.35
LINC01558Q9Y6Z2 AC080188.3-201ENST00000624842 748 ntBASIC0.35□□□□□ -2.35
LINC01558Q9Y6Z2 AL590396.4-201ENST00000636779 956 ntBASIC0.35□□□□□ -2.35
LINC01558Q9Y6Z2 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.35
LINC01558Q9Y6Z2 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
LINC01558Q9Y6Z2 RNU6-23P-201ENST00000363283 107 ntBASIC0.34□□□□□ -2.36
LINC01558Q9Y6Z2 RNU6-546P-201ENST00000383991 107 ntBASIC0.34□□□□□ -2.36
LINC01558Q9Y6Z2 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.34□□□□□ -2.36
LINC01558Q9Y6Z2 RNU2-68P-201ENST00000410878 191 ntBASIC0.34□□□□□ -2.36
LINC01558Q9Y6Z2 RPL36AP36-201ENST00000418616 301 ntBASIC0.34□□□□□ -2.36
LINC01558Q9Y6Z2 Z98742.3-201ENST00000418637 326 ntBASIC0.34□□□□□ -2.36
LINC01558Q9Y6Z2 SNRPEP10-201ENST00000420249 274 ntBASIC0.34□□□□□ -2.36
LINC01558Q9Y6Z2 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC0.34□□□□□ -2.36
LINC01558Q9Y6Z2 AC007435.1-201ENST00000421086 415 ntBASIC0.34□□□□□ -2.36
LINC01558Q9Y6Z2 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0.34□□□□□ -2.36
LINC01558Q9Y6Z2 UBE2V1P8-201ENST00000437166 265 ntBASIC0.34□□□□□ -2.36
LINC01558Q9Y6Z2 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.34□□□□□ -2.36
LINC01558Q9Y6Z2 HMGN2P9-201ENST00000476875 229 ntBASIC0.34□□□□□ -2.36
LINC01558Q9Y6Z2 AC087343.1-201ENST00000477341 475 ntBASIC0.34□□□□□ -2.36
LINC01558Q9Y6Z2 RPL30P1-201ENST00000488676 339 ntBASIC0.34□□□□□ -2.36
LINC01558Q9Y6Z2 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.34□□□□□ -2.36
LINC01558Q9Y6Z2 MTCYBP43-201ENST00000513621 740 ntBASIC0.34□□□□□ -2.36
LINC01558Q9Y6Z2 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.34□□□□□ -2.36
LINC01558Q9Y6Z2 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.34□□□□□ -2.36
LINC01558Q9Y6Z2 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.34□□□□□ -2.36
LINC01558Q9Y6Z2 AL512310.8-201ENST00000550183 120 ntBASIC0.34□□□□□ -2.36
LINC01558Q9Y6Z2 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.34□□□□□ -2.36
LINC01558Q9Y6Z2 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC0.34□□□□□ -2.36
LINC01558Q9Y6Z2 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.34□□□□□ -2.36
LINC01558Q9Y6Z2 MIR4513-201ENST00000581077 86 ntBASIC0.34□□□□□ -2.36
LINC01558Q9Y6Z2 AL158211.4-201ENST00000606988 584 ntBASIC0.34□□□□□ -2.36
LINC01558Q9Y6Z2 AC040896.1-201ENST00000613819 479 ntBASIC0.34□□□□□ -2.36
LINC01558Q9Y6Z2 MIR6729-201ENST00000618194 65 ntBASIC0.34□□□□□ -2.36
LINC01558Q9Y6Z2 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.34□□□□□ -2.36
LINC01558Q9Y6Z2 AC091895.1-201ENST00000624494 256 ntBASIC0.34□□□□□ -2.36
LINC01558Q9Y6Z2 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
LINC01558Q9Y6Z2 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.34□□□□□ -2.36
LINC01558Q9Y6Z2 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.34□□□□□ -2.36
LINC01558Q9Y6Z2 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
LINC01558Q9Y6Z2 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
LINC01558Q9Y6Z2 Y_RNA.99-201ENST00000363138 105 ntBASIC0.33□□□□□ -2.36
LINC01558Q9Y6Z2 RNU6-112P-201ENST00000363599 104 ntBASIC0.33□□□□□ -2.36
LINC01558Q9Y6Z2 AC119751.3-201ENST00000399720 670 ntBASIC0.33□□□□□ -2.36
LINC01558Q9Y6Z2 AL133475.1-201ENST00000404414 305 ntBASIC0.33□□□□□ -2.36
LINC01558Q9Y6Z2 AL592310.1-201ENST00000414330 671 ntBASIC0.33□□□□□ -2.36
LINC01558Q9Y6Z2 AL022400.1-201ENST00000423946 935 ntBASIC0.33□□□□□ -2.36
LINC01558Q9Y6Z2 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.33□□□□□ -2.36
LINC01558Q9Y6Z2 AL139415.2-201ENST00000431968 163 ntBASIC0.33□□□□□ -2.36
LINC01558Q9Y6Z2 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC0.33□□□□□ -2.36
LINC01558Q9Y6Z2 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC0.33□□□□□ -2.36
LINC01558Q9Y6Z2 AC025750.2-201ENST00000442609 450 ntBASIC0.33□□□□□ -2.36
LINC01558Q9Y6Z2 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.33□□□□□ -2.36
LINC01558Q9Y6Z2 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.33□□□□□ -2.36
LINC01558Q9Y6Z2 AC069306.1-201ENST00000507006 843 ntBASIC0.33□□□□□ -2.36
LINC01558Q9Y6Z2 ACA59.2-201ENST00000517061 156 ntBASIC0.33□□□□□ -2.36
LINC01558Q9Y6Z2 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.33□□□□□ -2.36
LINC01558Q9Y6Z2 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC0.33□□□□□ -2.36
LINC01558Q9Y6Z2 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.33□□□□□ -2.36
LINC01558Q9Y6Z2 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.33□□□□□ -2.36
LINC01558Q9Y6Z2 AC093249.1-201ENST00000567049 203 ntBASIC0.33□□□□□ -2.36
LINC01558Q9Y6Z2 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC0.33□□□□□ -2.36
LINC01558Q9Y6Z2 AC008751.2-201ENST00000597885 980 ntBASIC0.33□□□□□ -2.36
LINC01558Q9Y6Z2 AC090970.3-201ENST00000612566 866 ntBASIC0.33□□□□□ -2.36
LINC01558Q9Y6Z2 uc_338.12-201ENST00000616344 181 ntBASIC0.33□□□□□ -2.36
LINC01558Q9Y6Z2 AC004009.2-201ENST00000623016 728 ntBASIC0.33□□□□□ -2.36
LINC01558Q9Y6Z2 AC008993.2-201ENST00000631744 806 ntBASIC0.33□□□□□ -2.36
LINC01558Q9Y6Z2 RNU6-619P-201ENST00000365146 108 ntBASIC0.32□□□□□ -2.36
LINC01558Q9Y6Z2 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.32□□□□□ -2.36
LINC01558Q9Y6Z2 RNU6-253P-201ENST00000384730 105 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms