Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.95□□□□□ -1.78
COL4A3BPQ9Y5P4 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
COL4A3BPQ9Y5P4 AC004944.1-201ENST00000517807 3059 ntBASIC3.95□□□□□ -1.78
COL4A3BPQ9Y5P4 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
COL4A3BPQ9Y5P4 MIR423-201ENST00000362201 94 ntBASIC3.95□□□□□ -1.78
COL4A3BPQ9Y5P4 RNU6-750P-201ENST00000390946 107 ntBASIC3.95□□□□□ -1.78
COL4A3BPQ9Y5P4 SAR1AP2-201ENST00000392696 594 ntBASIC3.95□□□□□ -1.78
COL4A3BPQ9Y5P4 EIF4E2P1-201ENST00000393781 255 ntBASIC3.95□□□□□ -1.78
COL4A3BPQ9Y5P4 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.95□□□□□ -1.78
COL4A3BPQ9Y5P4 DBIP2-201ENST00000419076 262 ntBASIC3.95□□□□□ -1.78
COL4A3BPQ9Y5P4 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.95□□□□□ -1.78
COL4A3BPQ9Y5P4 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.95□□□□□ -1.78
COL4A3BPQ9Y5P4 SNORA14.1-201ENST00000516113 141 ntBASIC3.95□□□□□ -1.78
COL4A3BPQ9Y5P4 AP004607.1-201ENST00000524456 203 ntBASIC3.95□□□□□ -1.78
COL4A3BPQ9Y5P4 AL121821.2-201ENST00000556081 394 ntBASIC3.95□□□□□ -1.78
COL4A3BPQ9Y5P4 AC060780.3-201ENST00000589464 80 ntBASIC3.95□□□□□ -1.78
COL4A3BPQ9Y5P4 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.95□□□□□ -1.78
COL4A3BPQ9Y5P4 AC002044.1-201ENST00000606707 158 ntBASIC3.95□□□□□ -1.78
COL4A3BPQ9Y5P4 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.95□□□□□ -1.78
COL4A3BPQ9Y5P4 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL4A3BPQ9Y5P4 MTCO1P12-201ENST00000414273 1543 ntBASIC3.95□□□□□ -1.78
COL4A3BPQ9Y5P4 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL4A3BPQ9Y5P4 AC099654.7-201ENST00000635788 2127 ntBASIC3.94□□□□□ -1.78
COL4A3BPQ9Y5P4 SNORD46.1-201ENST00000364139 104 ntBASIC3.94□□□□□ -1.78
COL4A3BPQ9Y5P4 RNU6-522P-201ENST00000364497 107 ntBASIC3.94□□□□□ -1.78
COL4A3BPQ9Y5P4 RNU6-1280P-201ENST00000365211 107 ntBASIC3.94□□□□□ -1.78
COL4A3BPQ9Y5P4 RNU6-72P-201ENST00000384285 79 ntBASIC3.94□□□□□ -1.78
COL4A3BPQ9Y5P4 MIR518D-201ENST00000385014 87 ntBASIC3.94□□□□□ -1.78
COL4A3BPQ9Y5P4 RNU6-332P-201ENST00000391193 108 ntBASIC3.94□□□□□ -1.78
COL4A3BPQ9Y5P4 RHEBP3-201ENST00000411920 351 ntBASIC3.94□□□□□ -1.78
COL4A3BPQ9Y5P4 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.94□□□□□ -1.78
COL4A3BPQ9Y5P4 PGBD4P6-201ENST00000421501 610 ntBASIC3.94□□□□□ -1.78
COL4A3BPQ9Y5P4 AC006946.1-201ENST00000429106 328 ntBASIC3.94□□□□□ -1.78
COL4A3BPQ9Y5P4 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.94□□□□□ -1.78
COL4A3BPQ9Y5P4 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.94□□□□□ -1.78
COL4A3BPQ9Y5P4 AL161651.1-201ENST00000440882 223 ntBASIC3.94□□□□□ -1.78
COL4A3BPQ9Y5P4 HIGD1AP2-201ENST00000446367 280 ntBASIC3.94□□□□□ -1.78
COL4A3BPQ9Y5P4 AL671855.1-201ENST00000446875 1203 ntBASIC3.94□□□□□ -1.78
COL4A3BPQ9Y5P4 AC125238.1-201ENST00000448842 249 ntBASIC3.94□□□□□ -1.78
COL4A3BPQ9Y5P4 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.94□□□□□ -1.78
COL4A3BPQ9Y5P4 AC233279.1-201ENST00000455300 423 ntBASIC3.94□□□□□ -1.78
COL4A3BPQ9Y5P4 AC007547.1-201ENST00000462177 490 ntBASIC3.94□□□□□ -1.78
COL4A3BPQ9Y5P4 RPL7P49-201ENST00000471402 708 ntBASIC3.94□□□□□ -1.78
COL4A3BPQ9Y5P4 MTCYBP18-201ENST00000501056 747 ntBASIC3.94□□□□□ -1.78
COL4A3BPQ9Y5P4 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.94□□□□□ -1.78
COL4A3BPQ9Y5P4 SNORA19.2-201ENST00000516013 114 ntBASIC3.94□□□□□ -1.78
COL4A3BPQ9Y5P4 SNORA25.17-201ENST00000517184 124 ntBASIC3.94□□□□□ -1.78
COL4A3BPQ9Y5P4 AP006245.1-201ENST00000522549 120 ntBASIC3.94□□□□□ -1.78
COL4A3BPQ9Y5P4 AF235103.2-201ENST00000525753 346 ntBASIC3.94□□□□□ -1.78
COL4A3BPQ9Y5P4 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.94□□□□□ -1.78
COL4A3BPQ9Y5P4 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.94□□□□□ -1.78
COL4A3BPQ9Y5P4 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.94□□□□□ -1.78
COL4A3BPQ9Y5P4 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.94□□□□□ -1.78
COL4A3BPQ9Y5P4 ATP1B3P1-201ENST00000605365 821 ntBASIC3.94□□□□□ -1.78
COL4A3BPQ9Y5P4 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.94□□□□□ -1.78
COL4A3BPQ9Y5P4 MIR7851-201ENST00000610611 160 ntBASIC3.94□□□□□ -1.78
COL4A3BPQ9Y5P4 AC006504.8-201ENST00000621046 635 ntBASIC3.94□□□□□ -1.78
COL4A3BPQ9Y5P4 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.94□□□□□ -1.78
COL4A3BPQ9Y5P4 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.94□□□□□ -1.78
COL4A3BPQ9Y5P4 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.94□□□□□ -1.78
COL4A3BPQ9Y5P4 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
COL4A3BPQ9Y5P4 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL4A3BPQ9Y5P4 MIR208A-201ENST00000362287 71 ntBASIC3.93□□□□□ -1.78
COL4A3BPQ9Y5P4 AL139413.1-201ENST00000421309 217 ntBASIC3.93□□□□□ -1.78
COL4A3BPQ9Y5P4 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.93□□□□□ -1.78
COL4A3BPQ9Y5P4 AL159987.2-201ENST00000432754 307 ntBASIC3.93□□□□□ -1.78
COL4A3BPQ9Y5P4 RBMX2P4-201ENST00000441256 376 ntBASIC3.93□□□□□ -1.78
COL4A3BPQ9Y5P4 WASF1P1-201ENST00000447560 1131 ntBASIC3.93□□□□□ -1.78
COL4A3BPQ9Y5P4 AC092001.1-201ENST00000453012 261 ntBASIC3.93□□□□□ -1.78
COL4A3BPQ9Y5P4 PRSS3P4-201ENST00000453323 162 ntBASIC3.93□□□□□ -1.78
COL4A3BPQ9Y5P4 RBMY2UP-201ENST00000453474 324 ntBASIC3.93□□□□□ -1.78
COL4A3BPQ9Y5P4 AL590639.1-201ENST00000456484 337 ntBASIC3.93□□□□□ -1.78
COL4A3BPQ9Y5P4 RPS29P12-201ENST00000460178 152 ntBASIC3.93□□□□□ -1.78
COL4A3BPQ9Y5P4 RN7SL594P-201ENST00000470590 287 ntBASIC3.93□□□□□ -1.78
COL4A3BPQ9Y5P4 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.93□□□□□ -1.78
COL4A3BPQ9Y5P4 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.93□□□□□ -1.78
COL4A3BPQ9Y5P4 RAC1P5-201ENST00000512182 576 ntBASIC3.93□□□□□ -1.78
COL4A3BPQ9Y5P4 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
COL4A3BPQ9Y5P4 AC007151.1-201ENST00000572774 483 ntBASIC3.93□□□□□ -1.78
COL4A3BPQ9Y5P4 AL133393.1-201ENST00000603277 287 ntBASIC3.93□□□□□ -1.78
COL4A3BPQ9Y5P4 U4.6-201ENST00000621618 127 ntBASIC3.93□□□□□ -1.78
COL4A3BPQ9Y5P4 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
COL4A3BPQ9Y5P4 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL4A3BPQ9Y5P4 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.93□□□□□ -1.78
COL4A3BPQ9Y5P4 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.93□□□□□ -1.78
COL4A3BPQ9Y5P4 RPS4XP5-202ENST00000449995 1334 ntBASIC3.93□□□□□ -1.78
COL4A3BPQ9Y5P4 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
COL4A3BPQ9Y5P4 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
COL4A3BPQ9Y5P4 AC010889.1-201ENST00000566193 2666 ntBASIC3.92□□□□□ -1.78
COL4A3BPQ9Y5P4 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL4A3BPQ9Y5P4 SNORA70.4-201ENST00000365509 134 ntBASIC3.92□□□□□ -1.78
COL4A3BPQ9Y5P4 Y_RNA.530-201ENST00000384587 101 ntBASIC3.92□□□□□ -1.78
COL4A3BPQ9Y5P4 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.92□□□□□ -1.78
COL4A3BPQ9Y5P4 Y_RNA.615-201ENST00000410769 117 ntBASIC3.92□□□□□ -1.78
COL4A3BPQ9Y5P4 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.92□□□□□ -1.78
COL4A3BPQ9Y5P4 AC016831.2-201ENST00000417179 352 ntBASIC3.92□□□□□ -1.78
COL4A3BPQ9Y5P4 AL358075.3-201ENST00000426289 226 ntBASIC3.92□□□□□ -1.78
COL4A3BPQ9Y5P4 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.92□□□□□ -1.78
COL4A3BPQ9Y5P4 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.92□□□□□ -1.78
COL4A3BPQ9Y5P4 CYCSP35-201ENST00000451978 304 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 163.5 ms