Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 RPS20P2-201ENST00000402520 389 ntBASIC1.73□□□□□ -2.13
SHANK1Q9Y566 RPL19P1-201ENST00000411635 428 ntBASIC1.73□□□□□ -2.13
SHANK1Q9Y566 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.73□□□□□ -2.13
SHANK1Q9Y566 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.73□□□□□ -2.13
SHANK1Q9Y566 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.73□□□□□ -2.13
SHANK1Q9Y566 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.73□□□□□ -2.13
SHANK1Q9Y566 AC140059.1-201ENST00000489238 361 ntBASIC1.73□□□□□ -2.13
SHANK1Q9Y566 AC026801.1-201ENST00000497178 464 ntBASIC1.73□□□□□ -2.13
SHANK1Q9Y566 AIG1P1-201ENST00000503376 148 ntBASIC1.73□□□□□ -2.13
SHANK1Q9Y566 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SHANK1Q9Y566 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.73□□□□□ -2.13
SHANK1Q9Y566 FABP5P5-201ENST00000515537 406 ntBASIC1.73□□□□□ -2.13
SHANK1Q9Y566 SCARNA15.2-201ENST00000516409 127 ntBASIC1.73□□□□□ -2.13
SHANK1Q9Y566 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.73□□□□□ -2.13
SHANK1Q9Y566 MTND2P38-201ENST00000522536 667 ntBASIC1.73□□□□□ -2.13
SHANK1Q9Y566 MIR3199-1-201ENST00000582434 88 ntBASIC1.73□□□□□ -2.13
SHANK1Q9Y566 AL358072.1-201ENST00000604156 575 ntBASIC1.73□□□□□ -2.13
SHANK1Q9Y566 AL359999.1-201ENST00000604513 294 ntBASIC1.73□□□□□ -2.13
SHANK1Q9Y566 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
SHANK1Q9Y566 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.73□□□□□ -2.13
SHANK1Q9Y566 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.73□□□□□ -2.13
SHANK1Q9Y566 AC019226.1-201ENST00000625666 515 ntBASIC1.73□□□□□ -2.13
SHANK1Q9Y566 AC099654.13-201ENST00000639774 207 ntBASIC1.73□□□□□ -2.13
SHANK1Q9Y566 RNU6-600P-201ENST00000362524 99 ntBASIC1.72□□□□□ -2.13
SHANK1Q9Y566 RNU4-1-201ENST00000363925 141 ntBASIC1.72□□□□□ -2.13
SHANK1Q9Y566 AL589872.1-201ENST00000426602 288 ntBASIC1.72□□□□□ -2.13
SHANK1Q9Y566 AL590383.1-201ENST00000428602 75 ntBASIC1.72□□□□□ -2.13
SHANK1Q9Y566 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC1.72□□□□□ -2.13
SHANK1Q9Y566 PGBD4P3-201ENST00000440731 581 ntBASIC1.72□□□□□ -2.13
SHANK1Q9Y566 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.72□□□□□ -2.13
SHANK1Q9Y566 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.72□□□□□ -2.13
SHANK1Q9Y566 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.72□□□□□ -2.13
SHANK1Q9Y566 snoU109.1-201ENST00000459339 135 ntBASIC1.72□□□□□ -2.13
SHANK1Q9Y566 AC087588.1-201ENST00000462203 316 ntBASIC1.72□□□□□ -2.13
SHANK1Q9Y566 RPS29P11-201ENST00000496507 171 ntBASIC1.72□□□□□ -2.13
SHANK1Q9Y566 AC114786.4-201ENST00000508771 728 ntBASIC1.72□□□□□ -2.13
SHANK1Q9Y566 AC114797.1-201ENST00000514003 728 ntBASIC1.72□□□□□ -2.13
SHANK1Q9Y566 RNU6-1256P-201ENST00000516539 103 ntBASIC1.72□□□□□ -2.13
SHANK1Q9Y566 RNU6-798P-201ENST00000516912 103 ntBASIC1.72□□□□□ -2.13
SHANK1Q9Y566 SNORD19.2-201ENST00000516978 73 ntBASIC1.72□□□□□ -2.13
SHANK1Q9Y566 RNU6-56P-201ENST00000516986 93 ntBASIC1.72□□□□□ -2.13
SHANK1Q9Y566 AC011979.2-201ENST00000527568 352 ntBASIC1.72□□□□□ -2.13
SHANK1Q9Y566 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.72□□□□□ -2.13
SHANK1Q9Y566 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.72□□□□□ -2.13
SHANK1Q9Y566 NDUFA5P6-201ENST00000542110 379 ntBASIC1.72□□□□□ -2.13
SHANK1Q9Y566 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC1.72□□□□□ -2.13
SHANK1Q9Y566 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.72□□□□□ -2.13
SHANK1Q9Y566 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.72□□□□□ -2.13
SHANK1Q9Y566 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.72□□□□□ -2.13
SHANK1Q9Y566 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.72□□□□□ -2.13
SHANK1Q9Y566 AC120349.3-201ENST00000624377 529 ntBASIC1.72□□□□□ -2.13
SHANK1Q9Y566 FO624990.1-201ENST00000636373 85 ntBASIC1.72□□□□□ -2.13
SHANK1Q9Y566 MTND4P16-201ENST00000466108 1367 ntBASIC1.72□□□□□ -2.13
SHANK1Q9Y566 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
SHANK1Q9Y566 FARSBP1-201ENST00000435808 1778 ntBASIC1.72□□□□□ -2.13
SHANK1Q9Y566 MTND5P33-201ENST00000571250 1450 ntBASIC1.72□□□□□ -2.13
SHANK1Q9Y566 HSPE1P11-201ENST00000339579 310 ntBASIC1.72□□□□□ -2.13
SHANK1Q9Y566 RNA5SP325-201ENST00000363756 130 ntBASIC1.72□□□□□ -2.13
SHANK1Q9Y566 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
SHANK1Q9Y566 ZNF90P2-204ENST00000419323 1075 ntBASIC1.72□□□□□ -2.13
SHANK1Q9Y566 AC090960.1-201ENST00000421072 306 ntBASIC1.72□□□□□ -2.13
SHANK1Q9Y566 AC099548.1-201ENST00000421443 426 ntBASIC1.72□□□□□ -2.13
SHANK1Q9Y566 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.72□□□□□ -2.13
SHANK1Q9Y566 MTND1P20-201ENST00000430341 950 ntBASIC1.72□□□□□ -2.13
SHANK1Q9Y566 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.72□□□□□ -2.13
SHANK1Q9Y566 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.72□□□□□ -2.13
SHANK1Q9Y566 GAPDHP17-201ENST00000449858 1001 ntBASIC1.72□□□□□ -2.13
SHANK1Q9Y566 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.72□□□□□ -2.13
SHANK1Q9Y566 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.72□□□□□ -2.13
SHANK1Q9Y566 HMGN2P16-201ENST00000456802 261 ntBASIC1.72□□□□□ -2.13
SHANK1Q9Y566 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.72□□□□□ -2.13
SHANK1Q9Y566 RPL31P60-201ENST00000478450 367 ntBASIC1.72□□□□□ -2.13
SHANK1Q9Y566 RPL23AP55-201ENST00000498163 452 ntBASIC1.72□□□□□ -2.13
SHANK1Q9Y566 AC138853.1-201ENST00000503549 823 ntBASIC1.72□□□□□ -2.13
SHANK1Q9Y566 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.72□□□□□ -2.13
SHANK1Q9Y566 RNA5SP182-201ENST00000516064 82 ntBASIC1.72□□□□□ -2.13
SHANK1Q9Y566 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.72□□□□□ -2.13
SHANK1Q9Y566 AC011260.1-201ENST00000578420 472 ntBASIC1.72□□□□□ -2.13
SHANK1Q9Y566 AC110760.3-201ENST00000598794 467 ntBASIC1.72□□□□□ -2.13
SHANK1Q9Y566 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.72□□□□□ -2.13
SHANK1Q9Y566 AL390240.1-201ENST00000612950 384 ntBASIC1.72□□□□□ -2.13
SHANK1Q9Y566 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.72□□□□□ -2.13
SHANK1Q9Y566 TPTE2P4-201ENST00000258589 1605 ntBASIC1.72□□□□□ -2.13
SHANK1Q9Y566 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
SHANK1Q9Y566 Y_RNA.46-201ENST00000362695 102 ntBASIC1.71□□□□□ -2.14
SHANK1Q9Y566 RNU6-433P-201ENST00000363216 104 ntBASIC1.71□□□□□ -2.14
SHANK1Q9Y566 AC078974.1-201ENST00000411597 223 ntBASIC1.71□□□□□ -2.14
SHANK1Q9Y566 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.71□□□□□ -2.14
SHANK1Q9Y566 AL365203.2-201ENST00000423444 196 ntBASIC1.71□□□□□ -2.14
SHANK1Q9Y566 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.71□□□□□ -2.14
SHANK1Q9Y566 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.71□□□□□ -2.14
SHANK1Q9Y566 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.71□□□□□ -2.14
SHANK1Q9Y566 AC020550.1-201ENST00000447385 163 ntBASIC1.71□□□□□ -2.14
SHANK1Q9Y566 SNORD97-201ENST00000459187 142 ntBASIC1.71□□□□□ -2.14
SHANK1Q9Y566 AC025033.1-201ENST00000463883 194 ntBASIC1.71□□□□□ -2.14
SHANK1Q9Y566 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.71□□□□□ -2.14
SHANK1Q9Y566 AC117532.1-201ENST00000514638 323 ntBASIC1.71□□□□□ -2.14
SHANK1Q9Y566 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC1.71□□□□□ -2.14
SHANK1Q9Y566 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.71□□□□□ -2.14
SHANK1Q9Y566 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms