Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PKP3Q9Y446 AL136164.4-201ENST00000625013 2135 ntBASIC3.26□□□□□ -1.89
PKP3Q9Y446 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.26□□□□□ -1.89
PKP3Q9Y446 AC002546.1-201ENST00000588041 2504 ntBASIC3.26□□□□□ -1.89
PKP3Q9Y446 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.26□□□□□ -1.89
PKP3Q9Y446 MTND4P12-201ENST00000498999 1377 ntBASIC3.25□□□□□ -1.89
PKP3Q9Y446 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PKP3Q9Y446 AC022336.2-201ENST00000568966 2538 ntBASIC3.25□□□□□ -1.89
PKP3Q9Y446 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.25□□□□□ -1.89
PKP3Q9Y446 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PKP3Q9Y446 RNU6-371P-201ENST00000364283 108 ntBASIC3.25□□□□□ -1.89
PKP3Q9Y446 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.25□□□□□ -1.89
PKP3Q9Y446 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PKP3Q9Y446 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
PKP3Q9Y446 MIR578-201ENST00000384828 96 ntBASIC3.25□□□□□ -1.89
PKP3Q9Y446 AL078595.1-201ENST00000404458 226 ntBASIC3.25□□□□□ -1.89
PKP3Q9Y446 RPS4XP7-201ENST00000406274 780 ntBASIC3.25□□□□□ -1.89
PKP3Q9Y446 RNA5SP44-201ENST00000410446 133 ntBASIC3.25□□□□□ -1.89
PKP3Q9Y446 RNA5SP293-201ENST00000410527 113 ntBASIC3.25□□□□□ -1.89
PKP3Q9Y446 RNU6-1025P-201ENST00000410629 104 ntBASIC3.25□□□□□ -1.89
PKP3Q9Y446 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.25□□□□□ -1.89
PKP3Q9Y446 USP9YP8-201ENST00000441913 500 ntBASIC3.25□□□□□ -1.89
PKP3Q9Y446 PRPS1P1-201ENST00000445305 876 ntBASIC3.25□□□□□ -1.89
PKP3Q9Y446 AL360271.2-201ENST00000447710 161 ntBASIC3.25□□□□□ -1.89
PKP3Q9Y446 RNU7-167P-201ENST00000459160 62 ntBASIC3.25□□□□□ -1.89
PKP3Q9Y446 DYNLL1P5-201ENST00000467158 270 ntBASIC3.25□□□□□ -1.89
PKP3Q9Y446 HMGN1P12-201ENST00000499125 195 ntBASIC3.25□□□□□ -1.89
PKP3Q9Y446 HIGD1AP13-201ENST00000509878 289 ntBASIC3.25□□□□□ -1.89
PKP3Q9Y446 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.25□□□□□ -1.89
PKP3Q9Y446 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.25□□□□□ -1.89
PKP3Q9Y446 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
PKP3Q9Y446 PSMA3P-201ENST00000555485 635 ntBASIC3.25□□□□□ -1.89
PKP3Q9Y446 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.25□□□□□ -1.89
PKP3Q9Y446 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.25□□□□□ -1.89
PKP3Q9Y446 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.25□□□□□ -1.89
PKP3Q9Y446 Z82243.1-201ENST00000609432 473 ntBASIC3.25□□□□□ -1.89
PKP3Q9Y446 AC002076.2-201ENST00000617362 122 ntBASIC3.25□□□□□ -1.89
PKP3Q9Y446 AC022306.2-201ENST00000617563 647 ntBASIC3.25□□□□□ -1.89
PKP3Q9Y446 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.25□□□□□ -1.89
PKP3Q9Y446 AC092628.2-201ENST00000622492 339 ntBASIC3.25□□□□□ -1.89
PKP3Q9Y446 AC022418.1-201ENST00000624118 445 ntBASIC3.25□□□□□ -1.89
PKP3Q9Y446 AC073476.4-201ENST00000628409 72 ntBASIC3.25□□□□□ -1.89
PKP3Q9Y446 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PKP3Q9Y446 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PKP3Q9Y446 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.25□□□□□ -1.89
PKP3Q9Y446 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
PKP3Q9Y446 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
PKP3Q9Y446 U3.12-201ENST00000364498 214 ntBASIC3.24□□□□□ -1.89
PKP3Q9Y446 RNU6-805P-201ENST00000365643 106 ntBASIC3.24□□□□□ -1.89
PKP3Q9Y446 RNU6-217P-201ENST00000384164 104 ntBASIC3.24□□□□□ -1.89
PKP3Q9Y446 Y_RNA.530-201ENST00000384587 101 ntBASIC3.24□□□□□ -1.89
PKP3Q9Y446 SNORA1.3-201ENST00000384676 136 ntBASIC3.24□□□□□ -1.89
PKP3Q9Y446 RNA5SP171-201ENST00000391071 115 ntBASIC3.24□□□□□ -1.89
PKP3Q9Y446 RNA5SP229-201ENST00000410809 99 ntBASIC3.24□□□□□ -1.89
PKP3Q9Y446 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.24□□□□□ -1.89
PKP3Q9Y446 AL645937.1-202ENST00000421799 937 ntBASIC3.24□□□□□ -1.89
PKP3Q9Y446 RPL35AP12-201ENST00000425362 338 ntBASIC3.24□□□□□ -1.89
PKP3Q9Y446 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.24□□□□□ -1.89
PKP3Q9Y446 HMGN2P20-201ENST00000437531 273 ntBASIC3.24□□□□□ -1.89
PKP3Q9Y446 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.24□□□□□ -1.89
PKP3Q9Y446 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.24□□□□□ -1.89
PKP3Q9Y446 AC115115.1-201ENST00000449927 248 ntBASIC3.24□□□□□ -1.89
PKP3Q9Y446 RN7SL601P-201ENST00000471221 293 ntBASIC3.24□□□□□ -1.89
PKP3Q9Y446 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.24□□□□□ -1.89
PKP3Q9Y446 AC083904.1-201ENST00000487828 231 ntBASIC3.24□□□□□ -1.89
PKP3Q9Y446 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.24□□□□□ -1.89
PKP3Q9Y446 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.24□□□□□ -1.89
PKP3Q9Y446 FAM206BP-201ENST00000510179 541 ntBASIC3.24□□□□□ -1.89
PKP3Q9Y446 AC008716.1-201ENST00000511084 513 ntBASIC3.24□□□□□ -1.89
PKP3Q9Y446 AC046134.1-201ENST00000514454 666 ntBASIC3.24□□□□□ -1.89
PKP3Q9Y446 AC112206.3-201ENST00000514578 389 ntBASIC3.24□□□□□ -1.89
PKP3Q9Y446 AC104027.1-201ENST00000521887 300 ntBASIC3.24□□□□□ -1.89
PKP3Q9Y446 AC087241.2-201ENST00000535801 324 ntBASIC3.24□□□□□ -1.89
PKP3Q9Y446 AC243972.3-201ENST00000539655 198 ntBASIC3.24□□□□□ -1.89
PKP3Q9Y446 AP000763.2-201ENST00000540641 163 ntBASIC3.24□□□□□ -1.89
PKP3Q9Y446 AL163153.1-201ENST00000554223 283 ntBASIC3.24□□□□□ -1.89
PKP3Q9Y446 MTCO3P23-201ENST00000561363 289 ntBASIC3.24□□□□□ -1.89
PKP3Q9Y446 BNIP3P25-201ENST00000596023 559 ntBASIC3.24□□□□□ -1.89
PKP3Q9Y446 VN1R80P-201ENST00000597126 338 ntBASIC3.24□□□□□ -1.89
PKP3Q9Y446 AC012119.1-201ENST00000603184 222 ntBASIC3.24□□□□□ -1.89
PKP3Q9Y446 AC025253.1-201ENST00000613623 543 ntBASIC3.24□□□□□ -1.89
PKP3Q9Y446 Y_RNA.804-201ENST00000615262 101 ntBASIC3.24□□□□□ -1.89
PKP3Q9Y446 AC103705.1-201ENST00000619013 241 ntBASIC3.24□□□□□ -1.89
PKP3Q9Y446 AC009248.2-201ENST00000619826 254 ntBASIC3.24□□□□□ -1.89
PKP3Q9Y446 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.24□□□□□ -1.89
PKP3Q9Y446 AC099506.2-201ENST00000623074 221 ntBASIC3.24□□□□□ -1.89
PKP3Q9Y446 AC091903.1-201ENST00000624322 454 ntBASIC3.24□□□□□ -1.89
PKP3Q9Y446 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PKP3Q9Y446 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.24□□□□□ -1.89
PKP3Q9Y446 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PKP3Q9Y446 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.24□□□□□ -1.89
PKP3Q9Y446 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
PKP3Q9Y446 AC121333.1-201ENST00000567488 2709 ntBASIC3.23□□□□□ -1.89
PKP3Q9Y446 FTLP6-201ENST00000355274 422 ntBASIC3.23□□□□□ -1.89
PKP3Q9Y446 RNU6-845P-201ENST00000362578 103 ntBASIC3.23□□□□□ -1.89
PKP3Q9Y446 Y_RNA.70-201ENST00000362886 110 ntBASIC3.23□□□□□ -1.89
PKP3Q9Y446 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PKP3Q9Y446 RNU6-1179P-201ENST00000384667 107 ntBASIC3.23□□□□□ -1.89
PKP3Q9Y446 RNU6-510P-201ENST00000391239 108 ntBASIC3.23□□□□□ -1.89
PKP3Q9Y446 RNU6-1148P-201ENST00000410992 104 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms