Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.69□□□□□ -1.66
SHROOM4Q9ULL8 ATG3P1-201ENST00000419507 911 ntBASIC4.69□□□□□ -1.66
SHROOM4Q9ULL8 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SHROOM4Q9ULL8 AC104850.1-201ENST00000435940 476 ntBASIC4.69□□□□□ -1.66
SHROOM4Q9ULL8 RPS24P1-201ENST00000438550 371 ntBASIC4.69□□□□□ -1.66
SHROOM4Q9ULL8 AC093392.2-201ENST00000450682 337 ntBASIC4.69□□□□□ -1.66
SHROOM4Q9ULL8 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC4.69□□□□□ -1.66
SHROOM4Q9ULL8 RPL23AP70-201ENST00000483361 460 ntBASIC4.69□□□□□ -1.66
SHROOM4Q9ULL8 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.69□□□□□ -1.66
SHROOM4Q9ULL8 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.69□□□□□ -1.66
SHROOM4Q9ULL8 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.69□□□□□ -1.66
SHROOM4Q9ULL8 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC4.69□□□□□ -1.66
SHROOM4Q9ULL8 Y_RNA.689-201ENST00000516589 107 ntBASIC4.69□□□□□ -1.66
SHROOM4Q9ULL8 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.69□□□□□ -1.66
SHROOM4Q9ULL8 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.69□□□□□ -1.66
SHROOM4Q9ULL8 AC040904.1-201ENST00000590850 223 ntBASIC4.69□□□□□ -1.66
SHROOM4Q9ULL8 AC008739.2-201ENST00000597006 317 ntBASIC4.69□□□□□ -1.66
SHROOM4Q9ULL8 AC119751.7-201ENST00000600494 245 ntBASIC4.69□□□□□ -1.66
SHROOM4Q9ULL8 AL451064.1-201ENST00000607718 471 ntBASIC4.69□□□□□ -1.66
SHROOM4Q9ULL8 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SHROOM4Q9ULL8 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SHROOM4Q9ULL8 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.68□□□□□ -1.66
SHROOM4Q9ULL8 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.68□□□□□ -1.66
SHROOM4Q9ULL8 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SHROOM4Q9ULL8 MIR558-201ENST00000384920 94 ntBASIC4.68□□□□□ -1.66
SHROOM4Q9ULL8 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.68□□□□□ -1.66
SHROOM4Q9ULL8 AC093106.2-201ENST00000428212 385 ntBASIC4.68□□□□□ -1.66
SHROOM4Q9ULL8 HMGB1P9-201ENST00000429856 646 ntBASIC4.68□□□□□ -1.66
SHROOM4Q9ULL8 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.68□□□□□ -1.66
SHROOM4Q9ULL8 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC4.68□□□□□ -1.66
SHROOM4Q9ULL8 AC007182.2-201ENST00000489251 402 ntBASIC4.68□□□□□ -1.66
SHROOM4Q9ULL8 RN7SKP282-201ENST00000516824 299 ntBASIC4.68□□□□□ -1.66
SHROOM4Q9ULL8 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SHROOM4Q9ULL8 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SHROOM4Q9ULL8 RNU6-193P-201ENST00000410977 107 ntBASIC4.67□□□□□ -1.66
SHROOM4Q9ULL8 RPL23AP30-201ENST00000432419 501 ntBASIC4.67□□□□□ -1.66
SHROOM4Q9ULL8 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.67□□□□□ -1.66
SHROOM4Q9ULL8 FABP5P13-201ENST00000452144 328 ntBASIC4.67□□□□□ -1.66
SHROOM4Q9ULL8 RNU6-956P-201ENST00000458868 103 ntBASIC4.67□□□□□ -1.66
SHROOM4Q9ULL8 RPS29P20-201ENST00000489592 171 ntBASIC4.67□□□□□ -1.66
SHROOM4Q9ULL8 AC026801.1-201ENST00000497178 464 ntBASIC4.67□□□□□ -1.66
SHROOM4Q9ULL8 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.67□□□□□ -1.66
SHROOM4Q9ULL8 RN7SKP219-201ENST00000516825 296 ntBASIC4.67□□□□□ -1.66
SHROOM4Q9ULL8 AC022616.3-201ENST00000523940 148 ntBASIC4.67□□□□□ -1.66
SHROOM4Q9ULL8 AC245014.2-201ENST00000603689 287 ntBASIC4.67□□□□□ -1.66
SHROOM4Q9ULL8 AC246785.4-201ENST00000605374 287 ntBASIC4.67□□□□□ -1.66
SHROOM4Q9ULL8 AC022893.3-201ENST00000607665 437 ntBASIC4.67□□□□□ -1.66
SHROOM4Q9ULL8 AC011939.3-201ENST00000613686 466 ntBASIC4.67□□□□□ -1.66
SHROOM4Q9ULL8 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
SHROOM4Q9ULL8 CR848007.1-201ENST00000442354 1699 ntBASIC4.67□□□□□ -1.66
SHROOM4Q9ULL8 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SHROOM4Q9ULL8 RNU6-297P-201ENST00000384636 107 ntBASIC4.66□□□□□ -1.66
SHROOM4Q9ULL8 AC007064.1-201ENST00000412238 351 ntBASIC4.66□□□□□ -1.66
SHROOM4Q9ULL8 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC4.66□□□□□ -1.66
SHROOM4Q9ULL8 RPL7P46-201ENST00000425129 740 ntBASIC4.66□□□□□ -1.66
SHROOM4Q9ULL8 AL591704.1-201ENST00000432574 275 ntBASIC4.66□□□□□ -1.66
SHROOM4Q9ULL8 AC091179.1-201ENST00000461606 579 ntBASIC4.66□□□□□ -1.66
SHROOM4Q9ULL8 SNORA18.6-201ENST00000516792 115 ntBASIC4.66□□□□□ -1.66
SHROOM4Q9ULL8 HSPE1P18-201ENST00000517602 280 ntBASIC4.66□□□□□ -1.66
SHROOM4Q9ULL8 MIR4498-201ENST00000577599 66 ntBASIC4.66□□□□□ -1.66
SHROOM4Q9ULL8 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.66□□□□□ -1.66
SHROOM4Q9ULL8 AC110760.3-201ENST00000598794 467 ntBASIC4.66□□□□□ -1.66
SHROOM4Q9ULL8 AC046143.2-201ENST00000609789 160 ntBASIC4.66□□□□□ -1.66
SHROOM4Q9ULL8 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SHROOM4Q9ULL8 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SHROOM4Q9ULL8 RNU6-778P-201ENST00000363269 103 ntBASIC4.65□□□□□ -1.66
SHROOM4Q9ULL8 Y_RNA.201-201ENST00000364052 96 ntBASIC4.65□□□□□ -1.66
SHROOM4Q9ULL8 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.65□□□□□ -1.66
SHROOM4Q9ULL8 PIGFP2-201ENST00000421400 651 ntBASIC4.65□□□□□ -1.66
SHROOM4Q9ULL8 AL591212.2-201ENST00000433923 257 ntBASIC4.65□□□□□ -1.66
SHROOM4Q9ULL8 RPL36AP6-201ENST00000435770 321 ntBASIC4.65□□□□□ -1.66
SHROOM4Q9ULL8 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.65□□□□□ -1.66
SHROOM4Q9ULL8 RPS15AP27-201ENST00000449183 343 ntBASIC4.65□□□□□ -1.66
SHROOM4Q9ULL8 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.65□□□□□ -1.66
SHROOM4Q9ULL8 MTATP6P7-201ENST00000453315 681 ntBASIC4.65□□□□□ -1.66
SHROOM4Q9ULL8 RN7SL297P-201ENST00000483161 293 ntBASIC4.65□□□□□ -1.66
SHROOM4Q9ULL8 RPL9P6-201ENST00000492764 598 ntBASIC4.65□□□□□ -1.66
SHROOM4Q9ULL8 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.65□□□□□ -1.66
SHROOM4Q9ULL8 SUB1P1-201ENST00000524415 382 ntBASIC4.65□□□□□ -1.66
SHROOM4Q9ULL8 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.65□□□□□ -1.66
SHROOM4Q9ULL8 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC4.65□□□□□ -1.66
SHROOM4Q9ULL8 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.65□□□□□ -1.66
SHROOM4Q9ULL8 AC130324.3-201ENST00000614165 542 ntBASIC4.65□□□□□ -1.66
SHROOM4Q9ULL8 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.65□□□□□ -1.66
SHROOM4Q9ULL8 AL359547.2-201ENST00000615810 418 ntBASIC4.65□□□□□ -1.66
SHROOM4Q9ULL8 U2.21-201ENST00000637295 81 ntBASIC4.65□□□□□ -1.66
SHROOM4Q9ULL8 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
SHROOM4Q9ULL8 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
SHROOM4Q9ULL8 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
SHROOM4Q9ULL8 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SHROOM4Q9ULL8 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC4.65□□□□□ -1.67
SHROOM4Q9ULL8 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
SHROOM4Q9ULL8 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SHROOM4Q9ULL8 RNU6-169P-201ENST00000365336 107 ntBASIC4.64□□□□□ -1.67
SHROOM4Q9ULL8 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SHROOM4Q9ULL8 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.64□□□□□ -1.67
SHROOM4Q9ULL8 AC114491.1-201ENST00000416095 246 ntBASIC4.64□□□□□ -1.67
SHROOM4Q9ULL8 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.64□□□□□ -1.67
SHROOM4Q9ULL8 BPY2DP-201ENST00000422208 265 ntBASIC4.64□□□□□ -1.67
SHROOM4Q9ULL8 MED13P1-201ENST00000428342 171 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms