Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AL589872.1-201ENST00000426602 288 ntBASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 AC093106.2-201ENST00000428212 385 ntBASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 AL139415.2-201ENST00000431968 163 ntBASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 AL591212.2-201ENST00000433923 257 ntBASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 CR769767.1-201ENST00000436337 346 ntBASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 BRK1P2-201ENST00000442875 223 ntBASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 HMGN2P10-201ENST00000448085 265 ntBASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 AC093899.1-201ENST00000457984 376 ntBASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 AL139824.2-201ENST00000458731 1095 ntBASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 AC107626.1-201ENST00000471084 183 ntBASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 RPS15AP34-201ENST00000487776 387 ntBASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 FABP5P5-201ENST00000515537 406 ntBASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 RNU5F-8P-201ENST00000515941 111 ntBASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 SCARNA17.1-201ENST00000516211 143 ntBASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 SCARNA17.2-201ENST00000516334 143 ntBASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 SNORD19.2-201ENST00000516978 73 ntBASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 SNORA31.18-201ENST00000517043 134 ntBASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 RN7SKP40-201ENST00000517211 242 ntBASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 AP003467.2-201ENST00000520175 319 ntBASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 AC145350.1-201ENST00000567426 208 ntBASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 AC105137.2-201ENST00000569073 466 ntBASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 AC012065.4-201ENST00000602445 679 ntBASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 AC022893.3-201ENST00000607665 437 ntBASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 AL161734.1-201ENST00000609720 557 ntBASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 AC087241.4-201ENST00000612441 480 ntBASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 SCARNA17.4-201ENST00000614296 143 ntBASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 AL512643.1-201ENST00000635735 524 ntBASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 Z99571.1-201ENST00000636677 394 ntBASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 U6.99-201ENST00000637524 83 ntBASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 MTND5P6-201ENST00000422338 1798 ntBASIC2.05□□□□□ -2.08
CLCF1Q9UBD9 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.05□□□□□ -2.08
CLCF1Q9UBD9 MIR21-201ENST00000362134 72 ntBASIC2.05□□□□□ -2.08
CLCF1Q9UBD9 RNU4-1-201ENST00000363925 141 ntBASIC2.05□□□□□ -2.08
CLCF1Q9UBD9 RNU6-461P-201ENST00000364195 107 ntBASIC2.05□□□□□ -2.08
CLCF1Q9UBD9 RNU6-188P-201ENST00000364207 107 ntBASIC2.05□□□□□ -2.08
CLCF1Q9UBD9 RNU6-1083P-201ENST00000384022 107 ntBASIC2.05□□□□□ -2.08
CLCF1Q9UBD9 AL049545.1-201ENST00000401856 572 ntBASIC2.05□□□□□ -2.08
CLCF1Q9UBD9 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.05□□□□□ -2.08
CLCF1Q9UBD9 USP9YP6-201ENST00000413550 854 ntBASIC2.05□□□□□ -2.08
CLCF1Q9UBD9 RPS6P15-201ENST00000431996 751 ntBASIC2.05□□□□□ -2.08
CLCF1Q9UBD9 AL591704.1-201ENST00000432574 275 ntBASIC2.05□□□□□ -2.08
CLCF1Q9UBD9 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.05□□□□□ -2.08
CLCF1Q9UBD9 AC018634.1-201ENST00000437554 401 ntBASIC2.05□□□□□ -2.08
CLCF1Q9UBD9 USP9YP15-201ENST00000442391 422 ntBASIC2.05□□□□□ -2.08
CLCF1Q9UBD9 RPL23AP49-201ENST00000492925 468 ntBASIC2.05□□□□□ -2.08
CLCF1Q9UBD9 Y_RNA.672-201ENST00000516289 104 ntBASIC2.05□□□□□ -2.08
CLCF1Q9UBD9 SNORA31.11-201ENST00000516528 139 ntBASIC2.05□□□□□ -2.08
CLCF1Q9UBD9 RNA5SP82-201ENST00000516707 92 ntBASIC2.05□□□□□ -2.08
CLCF1Q9UBD9 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.05□□□□□ -2.08
CLCF1Q9UBD9 AC084851.1-201ENST00000529105 249 ntBASIC2.05□□□□□ -2.08
CLCF1Q9UBD9 AP003122.4-201ENST00000530980 758 ntBASIC2.05□□□□□ -2.08
CLCF1Q9UBD9 RPL21P5-201ENST00000554662 472 ntBASIC2.05□□□□□ -2.08
CLCF1Q9UBD9 MIR1273D-201ENST00000577266 86 ntBASIC2.05□□□□□ -2.08
CLCF1Q9UBD9 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CLCF1Q9UBD9 HMGN1P30-201ENST00000589286 268 ntBASIC2.05□□□□□ -2.08
CLCF1Q9UBD9 AL391813.1-201ENST00000603098 260 ntBASIC2.05□□□□□ -2.08
CLCF1Q9UBD9 AP002360.4-201ENST00000606980 481 ntBASIC2.05□□□□□ -2.08
CLCF1Q9UBD9 AC135507.1-201ENST00000607214 561 ntBASIC2.05□□□□□ -2.08
CLCF1Q9UBD9 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.05□□□□□ -2.08
CLCF1Q9UBD9 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.05□□□□□ -2.08
CLCF1Q9UBD9 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.05□□□□□ -2.08
CLCF1Q9UBD9 AC007494.3-201ENST00000624660 743 ntBASIC2.05□□□□□ -2.08
CLCF1Q9UBD9 AC004520.1-201ENST00000608362 1413 ntBASIC2.05□□□□□ -2.08
CLCF1Q9UBD9 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.05□□□□□ -2.08
CLCF1Q9UBD9 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
CLCF1Q9UBD9 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
CLCF1Q9UBD9 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.04□□□□□ -2.08
CLCF1Q9UBD9 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
CLCF1Q9UBD9 RNU6-190P-201ENST00000384154 102 ntBASIC2.04□□□□□ -2.08
CLCF1Q9UBD9 Y_RNA.534-201ENST00000384599 112 ntBASIC2.04□□□□□ -2.08
CLCF1Q9UBD9 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.04□□□□□ -2.08
CLCF1Q9UBD9 ELOCP4-201ENST00000420090 333 ntBASIC2.04□□□□□ -2.08
CLCF1Q9UBD9 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.04□□□□□ -2.08
CLCF1Q9UBD9 RPL7P34-201ENST00000433316 712 ntBASIC2.04□□□□□ -2.08
CLCF1Q9UBD9 RPS15AP28-201ENST00000435088 386 ntBASIC2.04□□□□□ -2.08
CLCF1Q9UBD9 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.04□□□□□ -2.08
CLCF1Q9UBD9 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.04□□□□□ -2.08
CLCF1Q9UBD9 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.04□□□□□ -2.08
CLCF1Q9UBD9 AC007182.2-201ENST00000489251 402 ntBASIC2.04□□□□□ -2.08
CLCF1Q9UBD9 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.04□□□□□ -2.08
CLCF1Q9UBD9 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.04□□□□□ -2.08
CLCF1Q9UBD9 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.04□□□□□ -2.08
CLCF1Q9UBD9 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.04□□□□□ -2.08
CLCF1Q9UBD9 RNU6-914P-201ENST00000516749 109 ntBASIC2.04□□□□□ -2.08
CLCF1Q9UBD9 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
CLCF1Q9UBD9 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.04□□□□□ -2.08
CLCF1Q9UBD9 AC006199.1-201ENST00000548728 219 ntBASIC2.04□□□□□ -2.08
CLCF1Q9UBD9 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.04□□□□□ -2.08
CLCF1Q9UBD9 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.04□□□□□ -2.08
CLCF1Q9UBD9 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms