Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC096649.2-201ENST00000416186 393 ntBASIC3.32□□□□□ -1.88
LRFN1Q9P244 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.32□□□□□ -1.88
LRFN1Q9P244 CYCSP4-201ENST00000429682 331 ntBASIC3.32□□□□□ -1.88
LRFN1Q9P244 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.32□□□□□ -1.88
LRFN1Q9P244 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.32□□□□□ -1.88
LRFN1Q9P244 AL159987.2-201ENST00000432754 307 ntBASIC3.32□□□□□ -1.88
LRFN1Q9P244 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.32□□□□□ -1.88
LRFN1Q9P244 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.32□□□□□ -1.88
LRFN1Q9P244 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.32□□□□□ -1.88
LRFN1Q9P244 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.32□□□□□ -1.88
LRFN1Q9P244 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.32□□□□□ -1.88
LRFN1Q9P244 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.32□□□□□ -1.88
LRFN1Q9P244 RN7SL93P-201ENST00000463035 293 ntBASIC3.32□□□□□ -1.88
LRFN1Q9P244 RPL23AP14-201ENST00000468281 468 ntBASIC3.32□□□□□ -1.88
LRFN1Q9P244 RPL21P99-201ENST00000480369 423 ntBASIC3.32□□□□□ -1.88
LRFN1Q9P244 RPL21P93-201ENST00000480465 489 ntBASIC3.32□□□□□ -1.88
LRFN1Q9P244 AC069439.1-201ENST00000494739 167 ntBASIC3.32□□□□□ -1.88
LRFN1Q9P244 AC079140.5-201ENST00000507882 310 ntBASIC3.32□□□□□ -1.88
LRFN1Q9P244 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.32□□□□□ -1.88
LRFN1Q9P244 SNORD19.2-201ENST00000516978 73 ntBASIC3.32□□□□□ -1.88
LRFN1Q9P244 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.32□□□□□ -1.88
LRFN1Q9P244 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.32□□□□□ -1.88
LRFN1Q9P244 AC006199.1-201ENST00000548728 219 ntBASIC3.32□□□□□ -1.88
LRFN1Q9P244 BRDTP1-201ENST00000605735 677 ntBASIC3.32□□□□□ -1.88
LRFN1Q9P244 RMST_3.1-201ENST00000611651 109 ntBASIC3.32□□□□□ -1.88
LRFN1Q9P244 AC092628.2-201ENST00000622492 339 ntBASIC3.32□□□□□ -1.88
LRFN1Q9P244 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LRFN1Q9P244 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.32□□□□□ -1.88
LRFN1Q9P244 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
LRFN1Q9P244 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
LRFN1Q9P244 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.32□□□□□ -1.88
LRFN1Q9P244 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.31□□□□□ -1.88
LRFN1Q9P244 ADAM3A-203ENST00000461344 2157 ntBASIC3.31□□□□□ -1.88
LRFN1Q9P244 CEP170P1-201ENST00000502249 4587 ntBASIC3.31□□□□□ -1.88
LRFN1Q9P244 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.31□□□□□ -1.88
LRFN1Q9P244 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.31□□□□□ -1.88
LRFN1Q9P244 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
LRFN1Q9P244 RNA5SP50-201ENST00000363731 107 ntBASIC3.31□□□□□ -1.88
LRFN1Q9P244 MIR34A-201ENST00000385130 110 ntBASIC3.31□□□□□ -1.88
LRFN1Q9P244 MIR634-201ENST00000385208 97 ntBASIC3.31□□□□□ -1.88
LRFN1Q9P244 RNU6-750P-201ENST00000390946 107 ntBASIC3.31□□□□□ -1.88
LRFN1Q9P244 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.31□□□□□ -1.88
LRFN1Q9P244 RNA5SP118-201ENST00000410385 109 ntBASIC3.31□□□□□ -1.88
LRFN1Q9P244 RNU2-49P-201ENST00000410666 184 ntBASIC3.31□□□□□ -1.88
LRFN1Q9P244 RNU6-373P-201ENST00000411247 98 ntBASIC3.31□□□□□ -1.88
LRFN1Q9P244 AL645937.1-202ENST00000421799 937 ntBASIC3.31□□□□□ -1.88
LRFN1Q9P244 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.31□□□□□ -1.88
LRFN1Q9P244 SRIP2-201ENST00000428470 166 ntBASIC3.31□□□□□ -1.88
LRFN1Q9P244 HMGB1P31-201ENST00000437242 427 ntBASIC3.31□□□□□ -1.88
LRFN1Q9P244 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.31□□□□□ -1.88
LRFN1Q9P244 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.31□□□□□ -1.88
LRFN1Q9P244 BTF3P15-201ENST00000455606 336 ntBASIC3.31□□□□□ -1.88
LRFN1Q9P244 AC004801.2-202ENST00000463559 283 ntBASIC3.31□□□□□ -1.88
LRFN1Q9P244 DYNLL1P5-201ENST00000467158 270 ntBASIC3.31□□□□□ -1.88
LRFN1Q9P244 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.31□□□□□ -1.88
LRFN1Q9P244 Y_RNA.654-201ENST00000497848 106 ntBASIC3.31□□□□□ -1.88
LRFN1Q9P244 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LRFN1Q9P244 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.31□□□□□ -1.88
LRFN1Q9P244 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.31□□□□□ -1.88
LRFN1Q9P244 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.31□□□□□ -1.88
LRFN1Q9P244 AL118558.2-201ENST00000556294 238 ntBASIC3.31□□□□□ -1.88
LRFN1Q9P244 MIR3186-201ENST00000577404 85 ntBASIC3.31□□□□□ -1.88
LRFN1Q9P244 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.31□□□□□ -1.88
LRFN1Q9P244 MIR548S-201ENST00000581352 82 ntBASIC3.31□□□□□ -1.88
LRFN1Q9P244 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LRFN1Q9P244 AC011471.1-201ENST00000585766 187 ntBASIC3.31□□□□□ -1.88
LRFN1Q9P244 AC010525.2-201ENST00000590920 195 ntBASIC3.31□□□□□ -1.88
LRFN1Q9P244 RNU6-89P-201ENST00000606519 100 ntBASIC3.31□□□□□ -1.88
LRFN1Q9P244 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.31□□□□□ -1.88
LRFN1Q9P244 AC024614.3-201ENST00000637860 256 ntBASIC3.31□□□□□ -1.88
LRFN1Q9P244 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LRFN1Q9P244 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.31□□□□□ -1.88
LRFN1Q9P244 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LRFN1Q9P244 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.31□□□□□ -1.88
LRFN1Q9P244 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
LRFN1Q9P244 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LRFN1Q9P244 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.3□□□□□ -1.88
LRFN1Q9P244 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
LRFN1Q9P244 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
LRFN1Q9P244 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LRFN1Q9P244 RNU6-1303P-201ENST00000364841 107 ntBASIC3.3□□□□□ -1.88
LRFN1Q9P244 Y_RNA.303-201ENST00000364998 94 ntBASIC3.3□□□□□ -1.88
LRFN1Q9P244 RNU6-898P-201ENST00000365627 104 ntBASIC3.3□□□□□ -1.88
LRFN1Q9P244 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
LRFN1Q9P244 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
LRFN1Q9P244 RNA5SP354-201ENST00000391247 136 ntBASIC3.3□□□□□ -1.88
LRFN1Q9P244 SAR1AP2-201ENST00000392696 594 ntBASIC3.3□□□□□ -1.88
LRFN1Q9P244 RPS4XP7-201ENST00000406274 780 ntBASIC3.3□□□□□ -1.88
LRFN1Q9P244 AC009414.1-201ENST00000427200 443 ntBASIC3.3□□□□□ -1.88
LRFN1Q9P244 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.3□□□□□ -1.88
LRFN1Q9P244 ERLEC1P1-201ENST00000433806 578 ntBASIC3.3□□□□□ -1.88
LRFN1Q9P244 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.3□□□□□ -1.88
LRFN1Q9P244 AL121601.2-201ENST00000438019 707 ntBASIC3.3□□□□□ -1.88
LRFN1Q9P244 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.3□□□□□ -1.88
LRFN1Q9P244 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.3□□□□□ -1.88
LRFN1Q9P244 MRPS31P2-201ENST00000451581 518 ntBASIC3.3□□□□□ -1.88
LRFN1Q9P244 FCF1P3-201ENST00000496394 590 ntBASIC3.3□□□□□ -1.88
LRFN1Q9P244 AC093663.1-201ENST00000497190 394 ntBASIC3.3□□□□□ -1.88
LRFN1Q9P244 BTF3L4P4-201ENST00000506381 449 ntBASIC3.3□□□□□ -1.88
LRFN1Q9P244 RAC1P5-201ENST00000512182 576 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms