Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 Y_RNA.450-201ENST00000384198 113 ntBASIC2.65□□□□□ -1.99
NDE1Q9NXR1 SNORA54-201ENST00000384281 123 ntBASIC2.65□□□□□ -1.99
NDE1Q9NXR1 Y_RNA.576-201ENST00000384781 102 ntBASIC2.65□□□□□ -1.99
NDE1Q9NXR1 MIR454-201ENST00000390180 115 ntBASIC2.65□□□□□ -1.99
NDE1Q9NXR1 RNA5SP181-201ENST00000410246 98 ntBASIC2.65□□□□□ -1.99
NDE1Q9NXR1 MTCYBP8-201ENST00000422855 651 ntBASIC2.65□□□□□ -1.99
NDE1Q9NXR1 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.65□□□□□ -1.99
NDE1Q9NXR1 USP9YP18-201ENST00000425912 695 ntBASIC2.65□□□□□ -1.99
NDE1Q9NXR1 MTCO3P30-201ENST00000426425 670 ntBASIC2.65□□□□□ -1.99
NDE1Q9NXR1 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.65□□□□□ -1.99
NDE1Q9NXR1 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.65□□□□□ -1.99
NDE1Q9NXR1 MTND4P25-201ENST00000441039 533 ntBASIC2.65□□□□□ -1.99
NDE1Q9NXR1 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.65□□□□□ -1.99
NDE1Q9NXR1 PIGFP3-201ENST00000441918 722 ntBASIC2.65□□□□□ -1.99
NDE1Q9NXR1 CBWD4P-201ENST00000445695 655 ntBASIC2.65□□□□□ -1.99
NDE1Q9NXR1 RNU7-63P-201ENST00000459054 62 ntBASIC2.65□□□□□ -1.99
NDE1Q9NXR1 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.65□□□□□ -1.99
NDE1Q9NXR1 RPS27P27-201ENST00000498779 255 ntBASIC2.65□□□□□ -1.99
NDE1Q9NXR1 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.65□□□□□ -1.99
NDE1Q9NXR1 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.65□□□□□ -1.99
NDE1Q9NXR1 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.65□□□□□ -1.99
NDE1Q9NXR1 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.65□□□□□ -1.99
NDE1Q9NXR1 SNORA31.3-201ENST00000516029 96 ntBASIC2.65□□□□□ -1.99
NDE1Q9NXR1 RNU6-123P-201ENST00000516163 102 ntBASIC2.65□□□□□ -1.99
NDE1Q9NXR1 Y_RNA.689-201ENST00000516589 107 ntBASIC2.65□□□□□ -1.99
NDE1Q9NXR1 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.65□□□□□ -1.99
NDE1Q9NXR1 CASP1P1-201ENST00000526345 212 ntBASIC2.65□□□□□ -1.99
NDE1Q9NXR1 OR5AQ1P-201ENST00000527596 927 ntBASIC2.65□□□□□ -1.99
NDE1Q9NXR1 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.65□□□□□ -1.99
NDE1Q9NXR1 AC104383.1-201ENST00000530297 370 ntBASIC2.65□□□□□ -1.99
NDE1Q9NXR1 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.65□□□□□ -1.99
NDE1Q9NXR1 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.65□□□□□ -1.99
NDE1Q9NXR1 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
NDE1Q9NXR1 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
NDE1Q9NXR1 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.65□□□□□ -1.99
NDE1Q9NXR1 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.65□□□□□ -1.99
NDE1Q9NXR1 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.65□□□□□ -1.99
NDE1Q9NXR1 RPS3AP4-201ENST00000555161 764 ntBASIC2.65□□□□□ -1.99
NDE1Q9NXR1 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.65□□□□□ -1.99
NDE1Q9NXR1 AP005205.1-201ENST00000563503 508 ntBASIC2.65□□□□□ -1.99
NDE1Q9NXR1 AC025678.1-201ENST00000567861 338 ntBASIC2.65□□□□□ -1.99
NDE1Q9NXR1 HMGB1P6-201ENST00000569046 646 ntBASIC2.65□□□□□ -1.99
NDE1Q9NXR1 MIR5195-201ENST00000583555 115 ntBASIC2.65□□□□□ -1.99
NDE1Q9NXR1 AL354950.2-201ENST00000617939 290 ntBASIC2.65□□□□□ -1.99
NDE1Q9NXR1 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.65□□□□□ -1.99
NDE1Q9NXR1 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.65□□□□□ -1.99
NDE1Q9NXR1 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.65□□□□□ -1.99
NDE1Q9NXR1 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
NDE1Q9NXR1 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.64□□□□□ -1.99
NDE1Q9NXR1 UBE2L2-201ENST00000254302 429 ntBASIC2.64□□□□□ -1.99
NDE1Q9NXR1 RNU6-512P-201ENST00000364438 103 ntBASIC2.64□□□□□ -1.99
NDE1Q9NXR1 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.64□□□□□ -1.99
NDE1Q9NXR1 RNU6-1029P-201ENST00000384109 107 ntBASIC2.64□□□□□ -1.99
NDE1Q9NXR1 RNU6-190P-201ENST00000384154 102 ntBASIC2.64□□□□□ -1.99
NDE1Q9NXR1 RNU6-1197P-201ENST00000391183 107 ntBASIC2.64□□□□□ -1.99
NDE1Q9NXR1 NDUFB4P4-201ENST00000404822 243 ntBASIC2.64□□□□□ -1.99
NDE1Q9NXR1 HMGN2P35-201ENST00000412164 270 ntBASIC2.64□□□□□ -1.99
NDE1Q9NXR1 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.64□□□□□ -1.99
NDE1Q9NXR1 ZNF90P2-204ENST00000419323 1075 ntBASIC2.64□□□□□ -1.99
NDE1Q9NXR1 MTCO1P20-201ENST00000425366 358 ntBASIC2.64□□□□□ -1.99
NDE1Q9NXR1 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.64□□□□□ -1.99
NDE1Q9NXR1 AL596276.1-201ENST00000434465 418 ntBASIC2.64□□□□□ -1.99
NDE1Q9NXR1 TAAR7P-201ENST00000436141 242 ntBASIC2.64□□□□□ -1.99
NDE1Q9NXR1 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.64□□□□□ -1.99
NDE1Q9NXR1 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.64□□□□□ -1.99
NDE1Q9NXR1 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.64□□□□□ -1.99
NDE1Q9NXR1 RPL32P34-201ENST00000486380 400 ntBASIC2.64□□□□□ -1.99
NDE1Q9NXR1 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.64□□□□□ -1.99
NDE1Q9NXR1 AC092436.1-201ENST00000506450 503 ntBASIC2.64□□□□□ -1.99
NDE1Q9NXR1 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.64□□□□□ -1.99
NDE1Q9NXR1 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.64□□□□□ -1.99
NDE1Q9NXR1 AP003034.1-201ENST00000534621 422 ntBASIC2.64□□□□□ -1.99
NDE1Q9NXR1 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.64□□□□□ -1.99
NDE1Q9NXR1 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.64□□□□□ -1.99
NDE1Q9NXR1 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.64□□□□□ -1.99
NDE1Q9NXR1 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.64□□□□□ -1.99
NDE1Q9NXR1 MIR5680-201ENST00000577577 84 ntBASIC2.64□□□□□ -1.99
NDE1Q9NXR1 MIR4775-201ENST00000581168 75 ntBASIC2.64□□□□□ -1.99
NDE1Q9NXR1 AL365204.3-201ENST00000612448 685 ntBASIC2.64□□□□□ -1.99
NDE1Q9NXR1 AC007014.2-201ENST00000615581 479 ntBASIC2.64□□□□□ -1.99
NDE1Q9NXR1 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.64□□□□□ -1.99
NDE1Q9NXR1 MIR3688-2-201ENST00000636963 87 ntBASIC2.64□□□□□ -1.99
NDE1Q9NXR1 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.64□□□□□ -1.99
NDE1Q9NXR1 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.63□□□□□ -1.99
NDE1Q9NXR1 Y_RNA.9-201ENST00000362354 101 ntBASIC2.63□□□□□ -1.99
NDE1Q9NXR1 Y_RNA.38-201ENST00000362617 102 ntBASIC2.63□□□□□ -1.99
NDE1Q9NXR1 Y_RNA.248-201ENST00000364501 109 ntBASIC2.63□□□□□ -1.99
NDE1Q9NXR1 SNORD115-7-201ENST00000365306 82 ntBASIC2.63□□□□□ -1.99
NDE1Q9NXR1 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.63□□□□□ -1.99
NDE1Q9NXR1 CISD1P1-201ENST00000393907 327 ntBASIC2.63□□□□□ -1.99
NDE1Q9NXR1 MIR1290-201ENST00000408735 78 ntBASIC2.63□□□□□ -1.99
NDE1Q9NXR1 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
NDE1Q9NXR1 OR51A5P-201ENST00000415429 942 ntBASIC2.63□□□□□ -1.99
NDE1Q9NXR1 USP9YP27-201ENST00000418455 438 ntBASIC2.63□□□□□ -1.99
NDE1Q9NXR1 AL645937.1-202ENST00000421799 937 ntBASIC2.63□□□□□ -1.99
NDE1Q9NXR1 AL356867.1-201ENST00000429623 299 ntBASIC2.63□□□□□ -1.99
NDE1Q9NXR1 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.63□□□□□ -1.99
NDE1Q9NXR1 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.63□□□□□ -1.99
NDE1Q9NXR1 RPS12P2-201ENST00000439728 269 ntBASIC2.63□□□□□ -1.99
NDE1Q9NXR1 AC016691.1-201ENST00000441321 413 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms