Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
BLOC1S4Q9NUP1 AL356057.1-201ENST00000533798 831 ntBASIC3.07□□□□□ -1.92
BLOC1S4Q9NUP1 MIR5692A1-201ENST00000580523 69 ntBASIC3.07□□□□□ -1.92
BLOC1S4Q9NUP1 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
BLOC1S4Q9NUP1 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.07□□□□□ -1.92
BLOC1S4Q9NUP1 AC008521.1-201ENST00000587471 187 ntBASIC3.07□□□□□ -1.92
BLOC1S4Q9NUP1 AL356280.1-201ENST00000603614 379 ntBASIC3.07□□□□□ -1.92
BLOC1S4Q9NUP1 AL138889.2-201ENST00000603883 242 ntBASIC3.07□□□□□ -1.92
BLOC1S4Q9NUP1 AC005332.10-201ENST00000612725 619 ntBASIC3.07□□□□□ -1.92
BLOC1S4Q9NUP1 AP001486.3-201ENST00000615334 372 ntBASIC3.07□□□□□ -1.92
BLOC1S4Q9NUP1 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.07□□□□□ -1.92
BLOC1S4Q9NUP1 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.07□□□□□ -1.92
BLOC1S4Q9NUP1 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
BLOC1S4Q9NUP1 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
BLOC1S4Q9NUP1 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
BLOC1S4Q9NUP1 Y_RNA.367-201ENST00000365544 101 ntBASIC3.06□□□□□ -1.92
BLOC1S4Q9NUP1 SNORD116-9-201ENST00000384000 95 ntBASIC3.06□□□□□ -1.92
BLOC1S4Q9NUP1 SNORD116-3-201ENST00000384287 95 ntBASIC3.06□□□□□ -1.92
BLOC1S4Q9NUP1 SNORD116-7-201ENST00000384404 95 ntBASIC3.06□□□□□ -1.92
BLOC1S4Q9NUP1 SNORD116-5-201ENST00000384462 95 ntBASIC3.06□□□□□ -1.92
BLOC1S4Q9NUP1 MIR454-201ENST00000390180 115 ntBASIC3.06□□□□□ -1.92
BLOC1S4Q9NUP1 Y_RNA.623-201ENST00000411128 95 ntBASIC3.06□□□□□ -1.92
BLOC1S4Q9NUP1 BMS1P22-201ENST00000414726 313 ntBASIC3.06□□□□□ -1.92
BLOC1S4Q9NUP1 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.06□□□□□ -1.92
BLOC1S4Q9NUP1 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.06□□□□□ -1.92
BLOC1S4Q9NUP1 USP9YP29-201ENST00000445112 563 ntBASIC3.06□□□□□ -1.92
BLOC1S4Q9NUP1 AC008716.1-201ENST00000511084 513 ntBASIC3.06□□□□□ -1.92
BLOC1S4Q9NUP1 RN7SKP132-201ENST00000516001 208 ntBASIC3.06□□□□□ -1.92
BLOC1S4Q9NUP1 RNU6-581P-201ENST00000516214 105 ntBASIC3.06□□□□□ -1.92
BLOC1S4Q9NUP1 MTCO2P4-201ENST00000517968 247 ntBASIC3.06□□□□□ -1.92
BLOC1S4Q9NUP1 BTF3P12-201ENST00000519620 469 ntBASIC3.06□□□□□ -1.92
BLOC1S4Q9NUP1 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.06□□□□□ -1.92
BLOC1S4Q9NUP1 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.06□□□□□ -1.92
BLOC1S4Q9NUP1 AL670379.4-201ENST00000605279 254 ntBASIC3.06□□□□□ -1.92
BLOC1S4Q9NUP1 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.06□□□□□ -1.92
BLOC1S4Q9NUP1 AL359854.1-201ENST00000614203 1594 ntBASIC3.06□□□□□ -1.92
BLOC1S4Q9NUP1 AL137790.1-201ENST00000634283 177 ntBASIC3.06□□□□□ -1.92
BLOC1S4Q9NUP1 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
BLOC1S4Q9NUP1 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.05□□□□□ -1.92
BLOC1S4Q9NUP1 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
BLOC1S4Q9NUP1 MTND4P27-201ENST00000450813 1354 ntBASIC3.05□□□□□ -1.92
BLOC1S4Q9NUP1 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.05□□□□□ -1.92
BLOC1S4Q9NUP1 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.05□□□□□ -1.92
BLOC1S4Q9NUP1 RNU6-898P-201ENST00000365627 104 ntBASIC3.05□□□□□ -1.92
BLOC1S4Q9NUP1 AL365338.1-201ENST00000422282 858 ntBASIC3.05□□□□□ -1.92
BLOC1S4Q9NUP1 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.05□□□□□ -1.92
BLOC1S4Q9NUP1 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.05□□□□□ -1.92
BLOC1S4Q9NUP1 AC087499.2-201ENST00000432861 149 ntBASIC3.05□□□□□ -1.92
BLOC1S4Q9NUP1 MTCO3P5-201ENST00000433620 714 ntBASIC3.05□□□□□ -1.92
BLOC1S4Q9NUP1 RPL23AP83-201ENST00000434984 473 ntBASIC3.05□□□□□ -1.92
BLOC1S4Q9NUP1 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.05□□□□□ -1.92
BLOC1S4Q9NUP1 AL590639.1-201ENST00000456484 337 ntBASIC3.05□□□□□ -1.92
BLOC1S4Q9NUP1 RNU7-182P-201ENST00000459009 62 ntBASIC3.05□□□□□ -1.92
BLOC1S4Q9NUP1 HMGB1P30-201ENST00000492455 606 ntBASIC3.05□□□□□ -1.92
BLOC1S4Q9NUP1 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.05□□□□□ -1.92
BLOC1S4Q9NUP1 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
BLOC1S4Q9NUP1 AC117532.1-201ENST00000514638 323 ntBASIC3.05□□□□□ -1.92
BLOC1S4Q9NUP1 RNA5SP112-201ENST00000515937 99 ntBASIC3.05□□□□□ -1.92
BLOC1S4Q9NUP1 SNORD27.1-201ENST00000516319 72 ntBASIC3.05□□□□□ -1.92
BLOC1S4Q9NUP1 SNORA9.3-201ENST00000516383 129 ntBASIC3.05□□□□□ -1.92
BLOC1S4Q9NUP1 OR4R1P-201ENST00000529879 463 ntBASIC3.05□□□□□ -1.92
BLOC1S4Q9NUP1 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.05□□□□□ -1.92
BLOC1S4Q9NUP1 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.05□□□□□ -1.92
BLOC1S4Q9NUP1 AL391840.1-201ENST00000571144 367 ntBASIC3.05□□□□□ -1.92
BLOC1S4Q9NUP1 MIR4765-201ENST00000585007 77 ntBASIC3.05□□□□□ -1.92
BLOC1S4Q9NUP1 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.05□□□□□ -1.92
BLOC1S4Q9NUP1 AC093648.1-201ENST00000623546 606 ntBASIC3.05□□□□□ -1.92
BLOC1S4Q9NUP1 CR381653.2-201ENST00000624041 768 ntBASIC3.05□□□□□ -1.92
BLOC1S4Q9NUP1 SEPT14P19-203ENST00000633205 211 ntBASIC3.05□□□□□ -1.92
BLOC1S4Q9NUP1 AC084035.1-201ENST00000634543 607 ntBASIC3.05□□□□□ -1.92
BLOC1S4Q9NUP1 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.05□□□□□ -1.92
BLOC1S4Q9NUP1 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
BLOC1S4Q9NUP1 RNU6-486P-201ENST00000363116 107 ntBASIC3.04□□□□□ -1.92
BLOC1S4Q9NUP1 RNU6-74P-201ENST00000384235 107 ntBASIC3.04□□□□□ -1.92
BLOC1S4Q9NUP1 RNU6-456P-201ENST00000384493 107 ntBASIC3.04□□□□□ -1.92
BLOC1S4Q9NUP1 MIR518D-201ENST00000385014 87 ntBASIC3.04□□□□□ -1.92
BLOC1S4Q9NUP1 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.04□□□□□ -1.92
BLOC1S4Q9NUP1 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.04□□□□□ -1.92
BLOC1S4Q9NUP1 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.04□□□□□ -1.92
BLOC1S4Q9NUP1 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.04□□□□□ -1.92
BLOC1S4Q9NUP1 FABP5P14-201ENST00000437273 393 ntBASIC3.04□□□□□ -1.92
BLOC1S4Q9NUP1 AL583843.1-201ENST00000456070 346 ntBASIC3.04□□□□□ -1.92
BLOC1S4Q9NUP1 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.04□□□□□ -1.92
BLOC1S4Q9NUP1 KLF3P2-201ENST00000465138 268 ntBASIC3.04□□□□□ -1.92
BLOC1S4Q9NUP1 MTAPP1-201ENST00000489154 819 ntBASIC3.04□□□□□ -1.92
BLOC1S4Q9NUP1 AC010493.1-201ENST00000513479 292 ntBASIC3.04□□□□□ -1.92
BLOC1S4Q9NUP1 AC112206.3-201ENST00000514578 389 ntBASIC3.04□□□□□ -1.92
BLOC1S4Q9NUP1 RNA5SP367-201ENST00000516557 118 ntBASIC3.04□□□□□ -1.92
BLOC1S4Q9NUP1 ACA59.2-201ENST00000517061 156 ntBASIC3.04□□□□□ -1.92
BLOC1S4Q9NUP1 RNU6-430P-201ENST00000517078 107 ntBASIC3.04□□□□□ -1.92
BLOC1S4Q9NUP1 FAM92A1P1-201ENST00000528023 890 ntBASIC3.04□□□□□ -1.92
BLOC1S4Q9NUP1 OR5AL2P-201ENST00000532185 920 ntBASIC3.04□□□□□ -1.92
BLOC1S4Q9NUP1 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.04□□□□□ -1.92
BLOC1S4Q9NUP1 AC012213.3-201ENST00000577199 777 ntBASIC3.04□□□□□ -1.92
BLOC1S4Q9NUP1 AC010620.1-201ENST00000601088 1102 ntBASIC3.04□□□□□ -1.92
BLOC1S4Q9NUP1 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.04□□□□□ -1.92
BLOC1S4Q9NUP1 RNU6-91P-201ENST00000607774 107 ntBASIC3.04□□□□□ -1.92
BLOC1S4Q9NUP1 AC135507.2-201ENST00000612443 309 ntBASIC3.04□□□□□ -1.92
BLOC1S4Q9NUP1 AC010678.1-201ENST00000614118 713 ntBASIC3.04□□□□□ -1.92
BLOC1S4Q9NUP1 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms