Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
EFCC1Q9HA90 RNU6-545P-201ENST00000362681 104 ntBASIC5.07□□□□□ -1.6
EFCC1Q9HA90 RNU6-1266P-201ENST00000362794 105 ntBASIC5.07□□□□□ -1.6
EFCC1Q9HA90 snoU2_19.2-201ENST00000363024 80 ntBASIC5.07□□□□□ -1.6
EFCC1Q9HA90 RNA5SP130-201ENST00000364431 114 ntBASIC5.07□□□□□ -1.6
EFCC1Q9HA90 RNU2-20P-201ENST00000410425 191 ntBASIC5.07□□□□□ -1.6
EFCC1Q9HA90 AL592045.1-201ENST00000429867 352 ntBASIC5.07□□□□□ -1.6
EFCC1Q9HA90 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC5.07□□□□□ -1.6
EFCC1Q9HA90 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC5.07□□□□□ -1.6
EFCC1Q9HA90 RNU7-87P-201ENST00000459343 62 ntBASIC5.07□□□□□ -1.6
EFCC1Q9HA90 RN7SL691P-201ENST00000494487 301 ntBASIC5.07□□□□□ -1.6
EFCC1Q9HA90 RNU4-71P-201ENST00000516258 113 ntBASIC5.07□□□□□ -1.6
EFCC1Q9HA90 RNU6-255P-201ENST00000516957 105 ntBASIC5.07□□□□□ -1.6
EFCC1Q9HA90 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.07□□□□□ -1.6
EFCC1Q9HA90 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC5.07□□□□□ -1.6
EFCC1Q9HA90 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.07□□□□□ -1.6
EFCC1Q9HA90 AC079587.1-201ENST00000603846 277 ntBASIC5.07□□□□□ -1.6
EFCC1Q9HA90 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC5.07□□□□□ -1.6
EFCC1Q9HA90 AC091903.1-201ENST00000624322 454 ntBASIC5.07□□□□□ -1.6
EFCC1Q9HA90 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.07□□□□□ -1.6
EFCC1Q9HA90 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.07□□□□□ -1.6
EFCC1Q9HA90 PRO1804-201ENST00000623780 2050 ntBASIC5.07□□□□□ -1.6
EFCC1Q9HA90 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.07□□□□□ -1.6
EFCC1Q9HA90 AL139811.1-201ENST00000424779 2299 ntBASIC5.07□□□□□ -1.6
EFCC1Q9HA90 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
EFCC1Q9HA90 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
EFCC1Q9HA90 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
EFCC1Q9HA90 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC5.06□□□□□ -1.6
EFCC1Q9HA90 HAUS6P2-201ENST00000433254 2404 ntBASIC5.06□□□□□ -1.6
EFCC1Q9HA90 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
EFCC1Q9HA90 RNU6-1249P-201ENST00000363237 111 ntBASIC5.06□□□□□ -1.6
EFCC1Q9HA90 Y_RNA.352-201ENST00000365439 102 ntBASIC5.06□□□□□ -1.6
EFCC1Q9HA90 AL591034.2-201ENST00000402839 359 ntBASIC5.06□□□□□ -1.6
EFCC1Q9HA90 MIR1250-201ENST00000408098 113 ntBASIC5.06□□□□□ -1.6
EFCC1Q9HA90 MIR548I2-201ENST00000408348 149 ntBASIC5.06□□□□□ -1.6
EFCC1Q9HA90 MIR1298-201ENST00000408783 112 ntBASIC5.06□□□□□ -1.6
EFCC1Q9HA90 AC091286.1-201ENST00000431233 461 ntBASIC5.06□□□□□ -1.6
EFCC1Q9HA90 AL445584.1-201ENST00000431451 330 ntBASIC5.06□□□□□ -1.6
EFCC1Q9HA90 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
EFCC1Q9HA90 RNA5SP49-201ENST00000516450 115 ntBASIC5.06□□□□□ -1.6
EFCC1Q9HA90 AL161713.1-201ENST00000555538 145 ntBASIC5.06□□□□□ -1.6
EFCC1Q9HA90 LRRC37A5P-203ENST00000580181 585 ntBASIC5.06□□□□□ -1.6
EFCC1Q9HA90 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.06□□□□□ -1.6
EFCC1Q9HA90 MIR376A1-201ENST00000616574 68 ntBASIC5.06□□□□□ -1.6
EFCC1Q9HA90 AC012442.3-202ENST00000636742 206 ntBASIC5.06□□□□□ -1.6
EFCC1Q9HA90 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
EFCC1Q9HA90 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC5.06□□□□□ -1.6
EFCC1Q9HA90 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
EFCC1Q9HA90 MTND5P9-201ENST00000503854 1755 ntBASIC5.06□□□□□ -1.6
EFCC1Q9HA90 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
EFCC1Q9HA90 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
EFCC1Q9HA90 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.05□□□□□ -1.6
EFCC1Q9HA90 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC5.05□□□□□ -1.6
EFCC1Q9HA90 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
EFCC1Q9HA90 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
EFCC1Q9HA90 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
EFCC1Q9HA90 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
EFCC1Q9HA90 RNU6-37P-201ENST00000362692 107 ntBASIC5.05□□□□□ -1.6
EFCC1Q9HA90 RNU6-1159P-201ENST00000362933 107 ntBASIC5.05□□□□□ -1.6
EFCC1Q9HA90 RNU1-83P-201ENST00000363426 164 ntBASIC5.05□□□□□ -1.6
EFCC1Q9HA90 RNU6-11P-201ENST00000364234 107 ntBASIC5.05□□□□□ -1.6
EFCC1Q9HA90 RNU6-7-201ENST00000364784 107 ntBASIC5.05□□□□□ -1.6
EFCC1Q9HA90 RNU6-8-201ENST00000365467 107 ntBASIC5.05□□□□□ -1.6
EFCC1Q9HA90 RNU6-25P-201ENST00000383873 107 ntBASIC5.05□□□□□ -1.6
EFCC1Q9HA90 RNU6-1-201ENST00000383898 107 ntBASIC5.05□□□□□ -1.6
EFCC1Q9HA90 RNU6-36P-201ENST00000384172 107 ntBASIC5.05□□□□□ -1.6
EFCC1Q9HA90 RNU6-4P-201ENST00000384205 107 ntBASIC5.05□□□□□ -1.6
EFCC1Q9HA90 RNU6-5P-201ENST00000384238 107 ntBASIC5.05□□□□□ -1.6
EFCC1Q9HA90 Y_RNA.458-201ENST00000384240 102 ntBASIC5.05□□□□□ -1.6
EFCC1Q9HA90 RNU6-662P-201ENST00000384253 104 ntBASIC5.05□□□□□ -1.6
EFCC1Q9HA90 RNU6-3P-201ENST00000384314 107 ntBASIC5.05□□□□□ -1.6
EFCC1Q9HA90 RNU6-16P-201ENST00000384385 107 ntBASIC5.05□□□□□ -1.6
EFCC1Q9HA90 RNU6-15P-201ENST00000384534 107 ntBASIC5.05□□□□□ -1.6
EFCC1Q9HA90 RNU6-2-201ENST00000384627 107 ntBASIC5.05□□□□□ -1.6
EFCC1Q9HA90 RNU6-29P-201ENST00000384637 107 ntBASIC5.05□□□□□ -1.6
EFCC1Q9HA90 RNU6-9-201ENST00000384776 107 ntBASIC5.05□□□□□ -1.6
EFCC1Q9HA90 MIR3065-201ENST00000390137 79 ntBASIC5.05□□□□□ -1.6
EFCC1Q9HA90 RPS6P12-201ENST00000432491 726 ntBASIC5.05□□□□□ -1.6
EFCC1Q9HA90 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.05□□□□□ -1.6
EFCC1Q9HA90 RNU6-1037P-201ENST00000459571 107 ntBASIC5.05□□□□□ -1.6
EFCC1Q9HA90 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.05□□□□□ -1.6
EFCC1Q9HA90 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC5.05□□□□□ -1.6
EFCC1Q9HA90 RNU1-86P-201ENST00000516108 154 ntBASIC5.05□□□□□ -1.6
EFCC1Q9HA90 RNU6-1095P-201ENST00000516148 108 ntBASIC5.05□□□□□ -1.6
EFCC1Q9HA90 RNU1-107P-201ENST00000516617 154 ntBASIC5.05□□□□□ -1.6
EFCC1Q9HA90 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
EFCC1Q9HA90 AC093023.1-201ENST00000547375 507 ntBASIC5.05□□□□□ -1.6
EFCC1Q9HA90 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC5.05□□□□□ -1.6
EFCC1Q9HA90 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC5.05□□□□□ -1.6
EFCC1Q9HA90 AC012468.1-201ENST00000604888 430 ntBASIC5.05□□□□□ -1.6
EFCC1Q9HA90 RNU6-6P-201ENST00000606623 107 ntBASIC5.05□□□□□ -1.6
EFCC1Q9HA90 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.05□□□□□ -1.6
EFCC1Q9HA90 AC008725.1-201ENST00000605123 2263 ntBASIC5.05□□□□□ -1.6
EFCC1Q9HA90 AL133412.1-201ENST00000380194 2992 ntBASIC5.05□□□□□ -1.6
EFCC1Q9HA90 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
EFCC1Q9HA90 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
EFCC1Q9HA90 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
EFCC1Q9HA90 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
EFCC1Q9HA90 MIR335-201ENST00000362173 94 ntBASIC5.04□□□□□ -1.6
EFCC1Q9HA90 Y_RNA.83-201ENST00000363005 113 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms