Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 RNU6-1085P-201ENST00000363576 107 ntBASIC3.06□□□□□ -1.92
POLR1BQ9H9Y6 RNU6-1322P-201ENST00000364309 107 ntBASIC3.06□□□□□ -1.92
POLR1BQ9H9Y6 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
POLR1BQ9H9Y6 MIR181A1-201ENST00000385026 110 ntBASIC3.06□□□□□ -1.92
POLR1BQ9H9Y6 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
POLR1BQ9H9Y6 RNU6-1025P-201ENST00000410629 104 ntBASIC3.06□□□□□ -1.92
POLR1BQ9H9Y6 RN7SKP123-201ENST00000410732 291 ntBASIC3.06□□□□□ -1.92
POLR1BQ9H9Y6 RNA5SP111-201ENST00000411386 101 ntBASIC3.06□□□□□ -1.92
POLR1BQ9H9Y6 USP9YP6-201ENST00000413550 854 ntBASIC3.06□□□□□ -1.92
POLR1BQ9H9Y6 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.06□□□□□ -1.92
POLR1BQ9H9Y6 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
POLR1BQ9H9Y6 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.06□□□□□ -1.92
POLR1BQ9H9Y6 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.06□□□□□ -1.92
POLR1BQ9H9Y6 BPY2DP-201ENST00000422208 265 ntBASIC3.06□□□□□ -1.92
POLR1BQ9H9Y6 AL353729.1-201ENST00000425044 720 ntBASIC3.06□□□□□ -1.92
POLR1BQ9H9Y6 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.06□□□□□ -1.92
POLR1BQ9H9Y6 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.06□□□□□ -1.92
POLR1BQ9H9Y6 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.06□□□□□ -1.92
POLR1BQ9H9Y6 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.06□□□□□ -1.92
POLR1BQ9H9Y6 SRRM1P2-201ENST00000464531 1192 ntBASIC3.06□□□□□ -1.92
POLR1BQ9H9Y6 AC006512.1-201ENST00000468816 291 ntBASIC3.06□□□□□ -1.92
POLR1BQ9H9Y6 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.06□□□□□ -1.92
POLR1BQ9H9Y6 AC009902.1-201ENST00000519351 183 ntBASIC3.06□□□□□ -1.92
POLR1BQ9H9Y6 MIR4703-201ENST00000577728 79 ntBASIC3.06□□□□□ -1.92
POLR1BQ9H9Y6 MIR548AC-201ENST00000585049 88 ntBASIC3.06□□□□□ -1.92
POLR1BQ9H9Y6 AP001596.2-201ENST00000608410 312 ntBASIC3.06□□□□□ -1.92
POLR1BQ9H9Y6 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.06□□□□□ -1.92
POLR1BQ9H9Y6 uc_338.1-201ENST00000612113 180 ntBASIC3.06□□□□□ -1.92
POLR1BQ9H9Y6 AC139792.3-201ENST00000623525 224 ntBASIC3.06□□□□□ -1.92
POLR1BQ9H9Y6 AC098679.4-201ENST00000624241 654 ntBASIC3.06□□□□□ -1.92
POLR1BQ9H9Y6 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.06□□□□□ -1.92
POLR1BQ9H9Y6 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.06□□□□□ -1.92
POLR1BQ9H9Y6 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
POLR1BQ9H9Y6 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.06□□□□□ -1.92
POLR1BQ9H9Y6 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
POLR1BQ9H9Y6 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.06□□□□□ -1.92
POLR1BQ9H9Y6 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.06□□□□□ -1.92
POLR1BQ9H9Y6 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
POLR1BQ9H9Y6 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
POLR1BQ9H9Y6 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.05□□□□□ -1.92
POLR1BQ9H9Y6 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
POLR1BQ9H9Y6 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.05□□□□□ -1.92
POLR1BQ9H9Y6 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.05□□□□□ -1.92
POLR1BQ9H9Y6 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.05□□□□□ -1.92
POLR1BQ9H9Y6 Y_RNA.3-201ENST00000362331 103 ntBASIC3.05□□□□□ -1.92
POLR1BQ9H9Y6 RNU6-517P-201ENST00000384362 110 ntBASIC3.05□□□□□ -1.92
POLR1BQ9H9Y6 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
POLR1BQ9H9Y6 RNU6-550P-201ENST00000391057 101 ntBASIC3.05□□□□□ -1.92
POLR1BQ9H9Y6 RN7SKP284-201ENST00000411002 343 ntBASIC3.05□□□□□ -1.92
POLR1BQ9H9Y6 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.05□□□□□ -1.92
POLR1BQ9H9Y6 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.05□□□□□ -1.92
POLR1BQ9H9Y6 Z99127.3-201ENST00000448158 395 ntBASIC3.05□□□□□ -1.92
POLR1BQ9H9Y6 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.05□□□□□ -1.92
POLR1BQ9H9Y6 RPS29P15-201ENST00000458329 171 ntBASIC3.05□□□□□ -1.92
POLR1BQ9H9Y6 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.05□□□□□ -1.92
POLR1BQ9H9Y6 AC139453.3-201ENST00000493276 369 ntBASIC3.05□□□□□ -1.92
POLR1BQ9H9Y6 AC009901.1-201ENST00000506703 541 ntBASIC3.05□□□□□ -1.92
POLR1BQ9H9Y6 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.05□□□□□ -1.92
POLR1BQ9H9Y6 RN7SKP282-201ENST00000516824 299 ntBASIC3.05□□□□□ -1.92
POLR1BQ9H9Y6 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.05□□□□□ -1.92
POLR1BQ9H9Y6 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.05□□□□□ -1.92
POLR1BQ9H9Y6 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.05□□□□□ -1.92
POLR1BQ9H9Y6 MIR5692A1-201ENST00000580523 69 ntBASIC3.05□□□□□ -1.92
POLR1BQ9H9Y6 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.05□□□□□ -1.92
POLR1BQ9H9Y6 HMGN2P15-201ENST00000585707 270 ntBASIC3.05□□□□□ -1.92
POLR1BQ9H9Y6 MTND4LP5-201ENST00000605152 292 ntBASIC3.05□□□□□ -1.92
POLR1BQ9H9Y6 AC126118.1-201ENST00000607744 628 ntBASIC3.05□□□□□ -1.92
POLR1BQ9H9Y6 AL591516.1-201ENST00000611326 274 ntBASIC3.05□□□□□ -1.92
POLR1BQ9H9Y6 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
POLR1BQ9H9Y6 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.05□□□□□ -1.92
POLR1BQ9H9Y6 AC000403.1-201ENST00000613696 3585 ntBASIC3.05□□□□□ -1.92
POLR1BQ9H9Y6 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
POLR1BQ9H9Y6 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.04□□□□□ -1.92
POLR1BQ9H9Y6 AC099654.7-201ENST00000635788 2127 ntBASIC3.04□□□□□ -1.92
POLR1BQ9H9Y6 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
POLR1BQ9H9Y6 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.04□□□□□ -1.92
POLR1BQ9H9Y6 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
POLR1BQ9H9Y6 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
POLR1BQ9H9Y6 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
POLR1BQ9H9Y6 MIR412-201ENST00000362142 91 ntBASIC3.04□□□□□ -1.92
POLR1BQ9H9Y6 SNORA71.1-201ENST00000364523 117 ntBASIC3.04□□□□□ -1.92
POLR1BQ9H9Y6 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.04□□□□□ -1.92
POLR1BQ9H9Y6 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
POLR1BQ9H9Y6 SNORA40C-201ENST00000391285 128 ntBASIC3.04□□□□□ -1.92
POLR1BQ9H9Y6 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
POLR1BQ9H9Y6 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.04□□□□□ -1.92
POLR1BQ9H9Y6 AL031779.1-201ENST00000415663 330 ntBASIC3.04□□□□□ -1.92
POLR1BQ9H9Y6 AL353193.1-201ENST00000421444 268 ntBASIC3.04□□□□□ -1.92
POLR1BQ9H9Y6 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.04□□□□□ -1.92
POLR1BQ9H9Y6 MTCO3P30-201ENST00000426425 670 ntBASIC3.04□□□□□ -1.92
POLR1BQ9H9Y6 MYL8P-204ENST00000431574 518 ntBASIC3.04□□□□□ -1.92
POLR1BQ9H9Y6 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.04□□□□□ -1.92
POLR1BQ9H9Y6 NDUFB1P2-201ENST00000449477 176 ntBASIC3.04□□□□□ -1.92
POLR1BQ9H9Y6 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.04□□□□□ -1.92
POLR1BQ9H9Y6 RPL21P41-201ENST00000459863 264 ntBASIC3.04□□□□□ -1.92
POLR1BQ9H9Y6 AC083798.1-201ENST00000472671 131 ntBASIC3.04□□□□□ -1.92
POLR1BQ9H9Y6 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.04□□□□□ -1.92
POLR1BQ9H9Y6 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.04□□□□□ -1.92
POLR1BQ9H9Y6 SNORA40.12-201ENST00000516329 111 ntBASIC3.04□□□□□ -1.92
POLR1BQ9H9Y6 AC009812.2-201ENST00000517657 457 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms