Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 RPL23AP78-201ENST00000599928 470 ntBASIC2.54□□□□□ -2
RNF41Q9H4P4 AP002360.4-201ENST00000606980 481 ntBASIC2.54□□□□□ -2
RNF41Q9H4P4 AC013412.1-201ENST00000610687 192 ntBASIC2.54□□□□□ -2
RNF41Q9H4P4 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.54□□□□□ -2
RNF41Q9H4P4 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RNF41Q9H4P4 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RNF41Q9H4P4 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.53□□□□□ -2
RNF41Q9H4P4 AL390237.1-201ENST00000404226 1415 ntBASIC2.53□□□□□ -2
RNF41Q9H4P4 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.53□□□□□ -2
RNF41Q9H4P4 SNORD56.2-201ENST00000363242 71 ntBASIC2.53□□□□□ -2
RNF41Q9H4P4 SNORA70B-201ENST00000384210 135 ntBASIC2.53□□□□□ -2
RNF41Q9H4P4 RNU6-198P-201ENST00000384258 104 ntBASIC2.53□□□□□ -2
RNF41Q9H4P4 Y_RNA.553-201ENST00000384670 102 ntBASIC2.53□□□□□ -2
RNF41Q9H4P4 MRPL42P2-201ENST00000403169 426 ntBASIC2.53□□□□□ -2
RNF41Q9H4P4 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.53□□□□□ -2
RNF41Q9H4P4 RNU6-195P-201ENST00000411352 109 ntBASIC2.53□□□□□ -2
RNF41Q9H4P4 AF274854.1-201ENST00000413236 615 ntBASIC2.53□□□□□ -2
RNF41Q9H4P4 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.53□□□□□ -2
RNF41Q9H4P4 AC006366.1-201ENST00000422002 759 ntBASIC2.53□□□□□ -2
RNF41Q9H4P4 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.53□□□□□ -2
RNF41Q9H4P4 MTCO1P19-201ENST00000443487 500 ntBASIC2.53□□□□□ -2
RNF41Q9H4P4 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.53□□□□□ -2
RNF41Q9H4P4 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.53□□□□□ -2
RNF41Q9H4P4 AL118520.1-201ENST00000450770 291 ntBASIC2.53□□□□□ -2
RNF41Q9H4P4 RPL12P25-201ENST00000455592 494 ntBASIC2.53□□□□□ -2
RNF41Q9H4P4 snoU109.1-201ENST00000459339 135 ntBASIC2.53□□□□□ -2
RNF41Q9H4P4 AC073901.1-201ENST00000462471 408 ntBASIC2.53□□□□□ -2
RNF41Q9H4P4 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
RNF41Q9H4P4 RPL9P6-201ENST00000492764 598 ntBASIC2.53□□□□□ -2
RNF41Q9H4P4 AC138853.1-201ENST00000503549 823 ntBASIC2.53□□□□□ -2
RNF41Q9H4P4 AC022447.1-201ENST00000515358 464 ntBASIC2.53□□□□□ -2
RNF41Q9H4P4 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
RNF41Q9H4P4 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.53□□□□□ -2
RNF41Q9H4P4 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.53□□□□□ -2
RNF41Q9H4P4 AC020895.1-201ENST00000595362 272 ntBASIC2.53□□□□□ -2
RNF41Q9H4P4 AC008250.2-201ENST00000615261 205 ntBASIC2.53□□□□□ -2
RNF41Q9H4P4 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.53□□□□□ -2
RNF41Q9H4P4 PISRT1-201ENST00000626175 531 ntBASIC2.53□□□□□ -2
RNF41Q9H4P4 U2.21-201ENST00000637295 81 ntBASIC2.53□□□□□ -2
RNF41Q9H4P4 AL137003.2-201ENST00000606924 2538 ntBASIC2.53□□□□□ -2
RNF41Q9H4P4 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.53□□□□□ -2
RNF41Q9H4P4 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
RNF41Q9H4P4 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RNF41Q9H4P4 UBE2L2-201ENST00000254302 429 ntBASIC2.52□□□□□ -2.01
RNF41Q9H4P4 HSPE1P11-201ENST00000339579 310 ntBASIC2.52□□□□□ -2.01
RNF41Q9H4P4 Y_RNA.22-201ENST00000362492 102 ntBASIC2.52□□□□□ -2.01
RNF41Q9H4P4 U8.2-201ENST00000363156 134 ntBASIC2.52□□□□□ -2.01
RNF41Q9H4P4 RNU6-188P-201ENST00000364207 107 ntBASIC2.52□□□□□ -2.01
RNF41Q9H4P4 RNY4P34-201ENST00000364779 95 ntBASIC2.52□□□□□ -2.01
RNF41Q9H4P4 RPS3AP36-201ENST00000398190 775 ntBASIC2.52□□□□□ -2.01
RNF41Q9H4P4 U3.37-201ENST00000408528 213 ntBASIC2.52□□□□□ -2.01
RNF41Q9H4P4 RPL7P37-201ENST00000425095 738 ntBASIC2.52□□□□□ -2.01
RNF41Q9H4P4 ZNF863P-201ENST00000426746 417 ntBASIC2.52□□□□□ -2.01
RNF41Q9H4P4 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.52□□□□□ -2.01
RNF41Q9H4P4 AL353706.1-201ENST00000436728 494 ntBASIC2.52□□□□□ -2.01
RNF41Q9H4P4 NEFMP1-201ENST00000443423 1006 ntBASIC2.52□□□□□ -2.01
RNF41Q9H4P4 AL360221.1-201ENST00000445989 335 ntBASIC2.52□□□□□ -2.01
RNF41Q9H4P4 DDX3P2-201ENST00000446138 111 ntBASIC2.52□□□□□ -2.01
RNF41Q9H4P4 CECR9-201ENST00000453421 199 ntBASIC2.52□□□□□ -2.01
RNF41Q9H4P4 RPL31P3-201ENST00000458430 332 ntBASIC2.52□□□□□ -2.01
RNF41Q9H4P4 AC104435.1-201ENST00000483483 166 ntBASIC2.52□□□□□ -2.01
RNF41Q9H4P4 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.52□□□□□ -2.01
RNF41Q9H4P4 SEM1P1-201ENST00000506694 209 ntBASIC2.52□□□□□ -2.01
RNF41Q9H4P4 ARL2BPP4-201ENST00000506854 471 ntBASIC2.52□□□□□ -2.01
RNF41Q9H4P4 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.52□□□□□ -2.01
RNF41Q9H4P4 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.52□□□□□ -2.01
RNF41Q9H4P4 SNORA31.11-201ENST00000516528 139 ntBASIC2.52□□□□□ -2.01
RNF41Q9H4P4 AC011979.2-201ENST00000527568 352 ntBASIC2.52□□□□□ -2.01
RNF41Q9H4P4 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.52□□□□□ -2.01
RNF41Q9H4P4 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.52□□□□□ -2.01
RNF41Q9H4P4 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.52□□□□□ -2.01
RNF41Q9H4P4 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.52□□□□□ -2.01
RNF41Q9H4P4 AC008739.2-201ENST00000597006 317 ntBASIC2.52□□□□□ -2.01
RNF41Q9H4P4 AL670379.6-201ENST00000603753 252 ntBASIC2.52□□□□□ -2.01
RNF41Q9H4P4 AL670379.11-201ENST00000604059 253 ntBASIC2.52□□□□□ -2.01
RNF41Q9H4P4 SEPT7P9-203ENST00000604116 343 ntBASIC2.52□□□□□ -2.01
RNF41Q9H4P4 AC008162.1-201ENST00000604718 254 ntBASIC2.52□□□□□ -2.01
RNF41Q9H4P4 AL670379.1-201ENST00000604752 252 ntBASIC2.52□□□□□ -2.01
RNF41Q9H4P4 AC064872.1-201ENST00000604823 1072 ntBASIC2.52□□□□□ -2.01
RNF41Q9H4P4 AL670379.5-201ENST00000605253 252 ntBASIC2.52□□□□□ -2.01
RNF41Q9H4P4 AL670379.12-201ENST00000605291 253 ntBASIC2.52□□□□□ -2.01
RNF41Q9H4P4 AL670379.8-201ENST00000605353 252 ntBASIC2.52□□□□□ -2.01
RNF41Q9H4P4 AL670379.7-201ENST00000605823 252 ntBASIC2.52□□□□□ -2.01
RNF41Q9H4P4 AL365204.3-201ENST00000612448 685 ntBASIC2.52□□□□□ -2.01
RNF41Q9H4P4 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.52□□□□□ -2.01
RNF41Q9H4P4 MIR219B-201ENST00000637023 88 ntBASIC2.52□□□□□ -2.01
RNF41Q9H4P4 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RNF41Q9H4P4 FARSBP1-201ENST00000435808 1778 ntBASIC2.51□□□□□ -2.01
RNF41Q9H4P4 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.51□□□□□ -2.01
RNF41Q9H4P4 RNA5SP139-201ENST00000364340 117 ntBASIC2.51□□□□□ -2.01
RNF41Q9H4P4 RNU6-512P-201ENST00000364438 103 ntBASIC2.51□□□□□ -2.01
RNF41Q9H4P4 Y_RNA.245-201ENST00000364493 95 ntBASIC2.51□□□□□ -2.01
RNF41Q9H4P4 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
RNF41Q9H4P4 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.51□□□□□ -2.01
RNF41Q9H4P4 MTND3P17-201ENST00000416968 344 ntBASIC2.51□□□□□ -2.01
RNF41Q9H4P4 BTF3L4P3-201ENST00000418879 476 ntBASIC2.51□□□□□ -2.01
RNF41Q9H4P4 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.51□□□□□ -2.01
RNF41Q9H4P4 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.51□□□□□ -2.01
RNF41Q9H4P4 AC119618.1-201ENST00000434191 222 ntBASIC2.51□□□□□ -2.01
RNF41Q9H4P4 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms