Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.31□□□□□ -1.88
CDT1Q9H211 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.31□□□□□ -1.88
CDT1Q9H211 AC104763.2-201ENST00000604179 382 ntBASIC3.31□□□□□ -1.88
CDT1Q9H211 AL132765.2-201ENST00000610812 351 ntBASIC3.31□□□□□ -1.88
CDT1Q9H211 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.31□□□□□ -1.88
CDT1Q9H211 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.31□□□□□ -1.88
CDT1Q9H211 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.31□□□□□ -1.88
CDT1Q9H211 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CDT1Q9H211 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.31□□□□□ -1.88
CDT1Q9H211 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDT1Q9H211 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CDT1Q9H211 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
CDT1Q9H211 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.3□□□□□ -1.88
CDT1Q9H211 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.3□□□□□ -1.88
CDT1Q9H211 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDT1Q9H211 API5P2-201ENST00000397055 1498 ntBASIC3.3□□□□□ -1.88
CDT1Q9H211 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CDT1Q9H211 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CDT1Q9H211 Y_RNA.72-201ENST00000362894 103 ntBASIC3.3□□□□□ -1.88
CDT1Q9H211 RNU6-288P-201ENST00000363690 104 ntBASIC3.3□□□□□ -1.88
CDT1Q9H211 RNU1-140P-201ENST00000365040 165 ntBASIC3.3□□□□□ -1.88
CDT1Q9H211 SNORD115-7-201ENST00000365306 82 ntBASIC3.3□□□□□ -1.88
CDT1Q9H211 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.3□□□□□ -1.88
CDT1Q9H211 Y_RNA.576-201ENST00000384781 102 ntBASIC3.3□□□□□ -1.88
CDT1Q9H211 MIR493-201ENST00000385254 89 ntBASIC3.3□□□□□ -1.88
CDT1Q9H211 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CDT1Q9H211 RPL32P35-201ENST00000415214 394 ntBASIC3.3□□□□□ -1.88
CDT1Q9H211 AC245291.1-201ENST00000419501 328 ntBASIC3.3□□□□□ -1.88
CDT1Q9H211 NDUFB4P7-201ENST00000423198 363 ntBASIC3.3□□□□□ -1.88
CDT1Q9H211 RPL35AP12-201ENST00000425362 338 ntBASIC3.3□□□□□ -1.88
CDT1Q9H211 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.3□□□□□ -1.88
CDT1Q9H211 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.3□□□□□ -1.88
CDT1Q9H211 FABP5P13-201ENST00000452144 328 ntBASIC3.3□□□□□ -1.88
CDT1Q9H211 GMFBP1-201ENST00000467831 427 ntBASIC3.3□□□□□ -1.88
CDT1Q9H211 RBBP4P6-201ENST00000508098 202 ntBASIC3.3□□□□□ -1.88
CDT1Q9H211 AC105417.1-201ENST00000514691 285 ntBASIC3.3□□□□□ -1.88
CDT1Q9H211 SNORA31.3-201ENST00000516029 96 ntBASIC3.3□□□□□ -1.88
CDT1Q9H211 RN7SKP219-201ENST00000516825 296 ntBASIC3.3□□□□□ -1.88
CDT1Q9H211 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.3□□□□□ -1.88
CDT1Q9H211 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.3□□□□□ -1.88
CDT1Q9H211 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.3□□□□□ -1.88
CDT1Q9H211 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
CDT1Q9H211 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.3□□□□□ -1.88
CDT1Q9H211 SCOCP1-201ENST00000554676 349 ntBASIC3.3□□□□□ -1.88
CDT1Q9H211 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.3□□□□□ -1.88
CDT1Q9H211 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.3□□□□□ -1.88
CDT1Q9H211 AC002545.1-201ENST00000592511 181 ntBASIC3.3□□□□□ -1.88
CDT1Q9H211 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.3□□□□□ -1.88
CDT1Q9H211 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.3□□□□□ -1.88
CDT1Q9H211 AL365204.3-201ENST00000612448 685 ntBASIC3.3□□□□□ -1.88
CDT1Q9H211 AC009248.2-201ENST00000619826 254 ntBASIC3.3□□□□□ -1.88
CDT1Q9H211 AC011155.2-201ENST00000623202 216 ntBASIC3.3□□□□□ -1.88
CDT1Q9H211 U6.114-201ENST00000636407 96 ntBASIC3.3□□□□□ -1.88
CDT1Q9H211 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.3□□□□□ -1.88
CDT1Q9H211 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDT1Q9H211 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CDT1Q9H211 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDT1Q9H211 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CDT1Q9H211 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDT1Q9H211 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CDT1Q9H211 OR4G1P-203ENST00000641984 1631 ntBASIC3.3□□□□□ -1.88
CDT1Q9H211 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.29□□□□□ -1.88
CDT1Q9H211 AC005183.1-201ENST00000603687 1979 ntBASIC3.29□□□□□ -1.88
CDT1Q9H211 MTND4P35-201ENST00000604257 1375 ntBASIC3.29□□□□□ -1.88
CDT1Q9H211 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
CDT1Q9H211 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CDT1Q9H211 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CDT1Q9H211 SNORA32.2-201ENST00000384049 122 ntBASIC3.29□□□□□ -1.88
CDT1Q9H211 RNU6-1029P-201ENST00000384109 107 ntBASIC3.29□□□□□ -1.88
CDT1Q9H211 RNU6-903P-201ENST00000391270 109 ntBASIC3.29□□□□□ -1.88
CDT1Q9H211 UBA52P6-201ENST00000399822 382 ntBASIC3.29□□□□□ -1.88
CDT1Q9H211 RNA5SP118-201ENST00000410385 109 ntBASIC3.29□□□□□ -1.88
CDT1Q9H211 EEF1A1P40-201ENST00000412883 573 ntBASIC3.29□□□□□ -1.88
CDT1Q9H211 AC092809.3-201ENST00000415453 231 ntBASIC3.29□□□□□ -1.88
CDT1Q9H211 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.29□□□□□ -1.88
CDT1Q9H211 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.29□□□□□ -1.88
CDT1Q9H211 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.29□□□□□ -1.88
CDT1Q9H211 HIGD1AP11-201ENST00000438361 280 ntBASIC3.29□□□□□ -1.88
CDT1Q9H211 MRPL50P4-201ENST00000446432 475 ntBASIC3.29□□□□□ -1.88
CDT1Q9H211 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.29□□□□□ -1.88
CDT1Q9H211 MTND1P18-201ENST00000448191 573 ntBASIC3.29□□□□□ -1.88
CDT1Q9H211 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.29□□□□□ -1.88
CDT1Q9H211 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.29□□□□□ -1.88
CDT1Q9H211 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.29□□□□□ -1.88
CDT1Q9H211 FGF7P4-201ENST00000509595 295 ntBASIC3.29□□□□□ -1.88
CDT1Q9H211 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.29□□□□□ -1.88
CDT1Q9H211 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.29□□□□□ -1.88
CDT1Q9H211 RNU6-927P-201ENST00000516199 100 ntBASIC3.29□□□□□ -1.88
CDT1Q9H211 Y_RNA.675-201ENST00000516389 149 ntBASIC3.29□□□□□ -1.88
CDT1Q9H211 RNU1-103P-201ENST00000516502 125 ntBASIC3.29□□□□□ -1.88
CDT1Q9H211 Y_RNA.689-201ENST00000516589 107 ntBASIC3.29□□□□□ -1.88
CDT1Q9H211 RNU7-30P-201ENST00000516835 62 ntBASIC3.29□□□□□ -1.88
CDT1Q9H211 RN7SKP272-201ENST00000516988 232 ntBASIC3.29□□□□□ -1.88
CDT1Q9H211 RNA5SP503-201ENST00000517047 117 ntBASIC3.29□□□□□ -1.88
CDT1Q9H211 BTF3P12-201ENST00000519620 469 ntBASIC3.29□□□□□ -1.88
CDT1Q9H211 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.29□□□□□ -1.88
CDT1Q9H211 AP001804.3-201ENST00000525146 880 ntBASIC3.29□□□□□ -1.88
CDT1Q9H211 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.29□□□□□ -1.88
CDT1Q9H211 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC3.29□□□□□ -1.88
CDT1Q9H211 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms