Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.3□□□□□ -2.04
POLR1EQ9GZS1 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
POLR1EQ9GZS1 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
POLR1EQ9GZS1 AC006020.1-201ENST00000420179 1854 ntBASIC2.29□□□□□ -2.04
POLR1EQ9GZS1 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.29□□□□□ -2.04
POLR1EQ9GZS1 TEX21P-201ENST00000447107 1476 ntBASIC2.29□□□□□ -2.04
POLR1EQ9GZS1 SNORA6-201ENST00000384033 151 ntBASIC2.29□□□□□ -2.04
POLR1EQ9GZS1 MIR301A-201ENST00000385261 86 ntBASIC2.29□□□□□ -2.04
POLR1EQ9GZS1 RPS12P24-201ENST00000412619 387 ntBASIC2.29□□□□□ -2.04
POLR1EQ9GZS1 AF274854.1-201ENST00000413236 615 ntBASIC2.29□□□□□ -2.04
POLR1EQ9GZS1 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.29□□□□□ -2.04
POLR1EQ9GZS1 USP9YP27-201ENST00000418455 438 ntBASIC2.29□□□□□ -2.04
POLR1EQ9GZS1 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.29□□□□□ -2.04
POLR1EQ9GZS1 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.29□□□□□ -2.04
POLR1EQ9GZS1 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.29□□□□□ -2.04
POLR1EQ9GZS1 AC004383.1-201ENST00000438135 289 ntBASIC2.29□□□□□ -2.04
POLR1EQ9GZS1 PGBD4P3-201ENST00000440731 581 ntBASIC2.29□□□□□ -2.04
POLR1EQ9GZS1 AC118469.1-201ENST00000442943 488 ntBASIC2.29□□□□□ -2.04
POLR1EQ9GZS1 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.29□□□□□ -2.04
POLR1EQ9GZS1 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.29□□□□□ -2.04
POLR1EQ9GZS1 RPL23AP49-201ENST00000492925 468 ntBASIC2.29□□□□□ -2.04
POLR1EQ9GZS1 AC107222.1-201ENST00000510899 637 ntBASIC2.29□□□□□ -2.04
POLR1EQ9GZS1 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.29□□□□□ -2.04
POLR1EQ9GZS1 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.29□□□□□ -2.04
POLR1EQ9GZS1 SMURF2P1-201ENST00000514992 481 ntBASIC2.29□□□□□ -2.04
POLR1EQ9GZS1 SNORA25.11-201ENST00000515935 105 ntBASIC2.29□□□□□ -2.04
POLR1EQ9GZS1 SNORA3.4-201ENST00000515969 96 ntBASIC2.29□□□□□ -2.04
POLR1EQ9GZS1 RN7SKP287-201ENST00000516546 266 ntBASIC2.29□□□□□ -2.04
POLR1EQ9GZS1 RNU6-201P-201ENST00000517100 61 ntBASIC2.29□□□□□ -2.04
POLR1EQ9GZS1 AC107934.1-201ENST00000522215 217 ntBASIC2.29□□□□□ -2.04
POLR1EQ9GZS1 CBX3P7-201ENST00000532876 502 ntBASIC2.29□□□□□ -2.04
POLR1EQ9GZS1 ZNF519P3-201ENST00000557158 1032 ntBASIC2.29□□□□□ -2.04
POLR1EQ9GZS1 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.29□□□□□ -2.04
POLR1EQ9GZS1 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.29□□□□□ -2.04
POLR1EQ9GZS1 AL138976.2-201ENST00000563989 694 ntBASIC2.29□□□□□ -2.04
POLR1EQ9GZS1 AC091489.2-201ENST00000566263 604 ntBASIC2.29□□□□□ -2.04
POLR1EQ9GZS1 AL358072.1-201ENST00000604156 575 ntBASIC2.29□□□□□ -2.04
POLR1EQ9GZS1 AC093424.1-201ENST00000604999 338 ntBASIC2.29□□□□□ -2.04
POLR1EQ9GZS1 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.29□□□□□ -2.04
POLR1EQ9GZS1 Z99571.1-201ENST00000636677 394 ntBASIC2.29□□□□□ -2.04
POLR1EQ9GZS1 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.29□□□□□ -2.04
POLR1EQ9GZS1 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.28□□□□□ -2.04
POLR1EQ9GZS1 AL445523.1-201ENST00000451184 1362 ntBASIC2.28□□□□□ -2.04
POLR1EQ9GZS1 RNU6-188P-201ENST00000364207 107 ntBASIC2.28□□□□□ -2.04
POLR1EQ9GZS1 RNY4P16-201ENST00000364768 94 ntBASIC2.28□□□□□ -2.04
POLR1EQ9GZS1 OR5H15-201ENST00000383696 930 ntBASIC2.28□□□□□ -2.04
POLR1EQ9GZS1 BTF3P7-201ENST00000407097 488 ntBASIC2.28□□□□□ -2.04
POLR1EQ9GZS1 RNA5SP270-201ENST00000411361 118 ntBASIC2.28□□□□□ -2.04
POLR1EQ9GZS1 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.28□□□□□ -2.04
POLR1EQ9GZS1 AC097463.2-201ENST00000421074 142 ntBASIC2.28□□□□□ -2.04
POLR1EQ9GZS1 AC006366.1-201ENST00000422002 759 ntBASIC2.28□□□□□ -2.04
POLR1EQ9GZS1 AL353777.1-201ENST00000425552 326 ntBASIC2.28□□□□□ -2.04
POLR1EQ9GZS1 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.28□□□□□ -2.04
POLR1EQ9GZS1 RPS15AP9-201ENST00000439856 381 ntBASIC2.28□□□□□ -2.04
POLR1EQ9GZS1 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.28□□□□□ -2.04
POLR1EQ9GZS1 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.28□□□□□ -2.04
POLR1EQ9GZS1 MTND1P3-201ENST00000484956 952 ntBASIC2.28□□□□□ -2.04
POLR1EQ9GZS1 AC116655.1-201ENST00000508324 901 ntBASIC2.28□□□□□ -2.04
POLR1EQ9GZS1 AF213884.2-201ENST00000510417 903 ntBASIC2.28□□□□□ -2.04
POLR1EQ9GZS1 MRPS33P3-201ENST00000513456 322 ntBASIC2.28□□□□□ -2.04
POLR1EQ9GZS1 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.28□□□□□ -2.04
POLR1EQ9GZS1 RNU6-1129P-201ENST00000515964 104 ntBASIC2.28□□□□□ -2.04
POLR1EQ9GZS1 RNU6-572P-201ENST00000516724 80 ntBASIC2.28□□□□□ -2.04
POLR1EQ9GZS1 ACA59.2-201ENST00000517061 156 ntBASIC2.28□□□□□ -2.04
POLR1EQ9GZS1 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.28□□□□□ -2.04
POLR1EQ9GZS1 ZNF321P-202ENST00000550843 495 ntBASIC2.28□□□□□ -2.04
POLR1EQ9GZS1 ARL2BPP2-201ENST00000550907 489 ntBASIC2.28□□□□□ -2.04
POLR1EQ9GZS1 AC009063.1-201ENST00000563342 702 ntBASIC2.28□□□□□ -2.04
POLR1EQ9GZS1 MIR3118-1-201ENST00000581787 76 ntBASIC2.28□□□□□ -2.04
POLR1EQ9GZS1 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.28□□□□□ -2.04
POLR1EQ9GZS1 AL353778.1-201ENST00000603149 408 ntBASIC2.28□□□□□ -2.04
POLR1EQ9GZS1 AP001981.2-201ENST00000603241 418 ntBASIC2.28□□□□□ -2.04
POLR1EQ9GZS1 AL138963.2-201ENST00000605137 226 ntBASIC2.28□□□□□ -2.04
POLR1EQ9GZS1 AC068276.1-201ENST00000605793 379 ntBASIC2.28□□□□□ -2.04
POLR1EQ9GZS1 MIR6840-201ENST00000611937 71 ntBASIC2.28□□□□□ -2.04
POLR1EQ9GZS1 AL161423.1-201ENST00000613700 262 ntBASIC2.28□□□□□ -2.04
POLR1EQ9GZS1 AC104010.1-201ENST00000616889 150 ntBASIC2.28□□□□□ -2.04
POLR1EQ9GZS1 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
POLR1EQ9GZS1 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
POLR1EQ9GZS1 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.27□□□□□ -2.05
POLR1EQ9GZS1 RNU5F-6P-201ENST00000362979 116 ntBASIC2.27□□□□□ -2.05
POLR1EQ9GZS1 MIR221-201ENST00000385135 110 ntBASIC2.27□□□□□ -2.05
POLR1EQ9GZS1 MTCYBP36-201ENST00000404146 440 ntBASIC2.27□□□□□ -2.05
POLR1EQ9GZS1 RNU2-36P-201ENST00000410361 191 ntBASIC2.27□□□□□ -2.05
POLR1EQ9GZS1 OR51A5P-201ENST00000415429 942 ntBASIC2.27□□□□□ -2.05
POLR1EQ9GZS1 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.27□□□□□ -2.05
POLR1EQ9GZS1 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.27□□□□□ -2.05
POLR1EQ9GZS1 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.27□□□□□ -2.05
POLR1EQ9GZS1 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.27□□□□□ -2.05
POLR1EQ9GZS1 AC093106.2-201ENST00000428212 385 ntBASIC2.27□□□□□ -2.05
POLR1EQ9GZS1 AL365184.2-201ENST00000431139 435 ntBASIC2.27□□□□□ -2.05
POLR1EQ9GZS1 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.27□□□□□ -2.05
POLR1EQ9GZS1 MTCYBP39-201ENST00000437562 491 ntBASIC2.27□□□□□ -2.05
POLR1EQ9GZS1 AL512286.1-201ENST00000439244 400 ntBASIC2.27□□□□□ -2.05
POLR1EQ9GZS1 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC2.27□□□□□ -2.05
POLR1EQ9GZS1 BTF3P15-201ENST00000455606 336 ntBASIC2.27□□□□□ -2.05
POLR1EQ9GZS1 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.27□□□□□ -2.05
POLR1EQ9GZS1 AC068781.1-201ENST00000488231 618 ntBASIC2.27□□□□□ -2.05
POLR1EQ9GZS1 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.27□□□□□ -2.05
POLR1EQ9GZS1 AC008526.1-201ENST00000509149 338 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms