Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
FOXP3Q9BZS1 OR56A5-201ENST00000340110 738 ntBASIC4.3□□□□□ -1.72
FOXP3Q9BZS1 RNU6-395P-201ENST00000365662 106 ntBASIC4.3□□□□□ -1.72
FOXP3Q9BZS1 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.3□□□□□ -1.72
FOXP3Q9BZS1 MTCO1P39-201ENST00000426148 480 ntBASIC4.3□□□□□ -1.72
FOXP3Q9BZS1 USP9YP7-201ENST00000436723 430 ntBASIC4.3□□□□□ -1.72
FOXP3Q9BZS1 SUMO1P3-201ENST00000439961 304 ntBASIC4.3□□□□□ -1.72
FOXP3Q9BZS1 AL356535.1-201ENST00000440335 398 ntBASIC4.3□□□□□ -1.72
FOXP3Q9BZS1 RPS3AP46-201ENST00000448352 682 ntBASIC4.3□□□□□ -1.72
FOXP3Q9BZS1 USP9YP32-201ENST00000452432 430 ntBASIC4.3□□□□□ -1.72
FOXP3Q9BZS1 HMGN2P13-201ENST00000476476 274 ntBASIC4.3□□□□□ -1.72
FOXP3Q9BZS1 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.3□□□□□ -1.72
FOXP3Q9BZS1 FTH1P9-201ENST00000513251 355 ntBASIC4.3□□□□□ -1.72
FOXP3Q9BZS1 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.3□□□□□ -1.72
FOXP3Q9BZS1 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.3□□□□□ -1.72
FOXP3Q9BZS1 MIR2116-201ENST00000517221 80 ntBASIC4.3□□□□□ -1.72
FOXP3Q9BZS1 AC144568.1-201ENST00000520139 137 ntBASIC4.3□□□□□ -1.72
FOXP3Q9BZS1 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
FOXP3Q9BZS1 TRAV37-201ENST00000553906 342 ntBASIC4.3□□□□□ -1.72
FOXP3Q9BZS1 AC106785.1-201ENST00000565935 262 ntBASIC4.3□□□□□ -1.72
FOXP3Q9BZS1 AC022968.1-201ENST00000567372 442 ntBASIC4.3□□□□□ -1.72
FOXP3Q9BZS1 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.3□□□□□ -1.72
FOXP3Q9BZS1 AL158827.2-201ENST00000602494 330 ntBASIC4.3□□□□□ -1.72
FOXP3Q9BZS1 AC098826.3-201ENST00000603823 466 ntBASIC4.3□□□□□ -1.72
FOXP3Q9BZS1 AL121917.1-203ENST00000605534 577 ntBASIC4.3□□□□□ -1.72
FOXP3Q9BZS1 AC099669.2-201ENST00000616549 437 ntBASIC4.3□□□□□ -1.72
FOXP3Q9BZS1 AL691447.3-201ENST00000635020 330 ntBASIC4.3□□□□□ -1.72
FOXP3Q9BZS1 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
FOXP3Q9BZS1 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
FOXP3Q9BZS1 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
FOXP3Q9BZS1 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
FOXP3Q9BZS1 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.3□□□□□ -1.72
FOXP3Q9BZS1 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
FOXP3Q9BZS1 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
FOXP3Q9BZS1 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.3□□□□□ -1.72
FOXP3Q9BZS1 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
FOXP3Q9BZS1 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
FOXP3Q9BZS1 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
FOXP3Q9BZS1 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
FOXP3Q9BZS1 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
FOXP3Q9BZS1 MIR331-201ENST00000362302 94 ntBASIC4.29□□□□□ -1.72
FOXP3Q9BZS1 Y_RNA.14-201ENST00000362415 103 ntBASIC4.29□□□□□ -1.72
FOXP3Q9BZS1 RNU1-132P-201ENST00000364300 164 ntBASIC4.29□□□□□ -1.72
FOXP3Q9BZS1 RNU4-50P-201ENST00000364361 141 ntBASIC4.29□□□□□ -1.72
FOXP3Q9BZS1 RNU6-512P-201ENST00000364438 103 ntBASIC4.29□□□□□ -1.72
FOXP3Q9BZS1 RNA5SP366-201ENST00000365454 123 ntBASIC4.29□□□□□ -1.72
FOXP3Q9BZS1 Y_RNA.376-201ENST00000365638 108 ntBASIC4.29□□□□□ -1.72
FOXP3Q9BZS1 Y_RNA.518-201ENST00000384552 113 ntBASIC4.29□□□□□ -1.72
FOXP3Q9BZS1 Y_RNA.562-201ENST00000384695 113 ntBASIC4.29□□□□□ -1.72
FOXP3Q9BZS1 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.29□□□□□ -1.72
FOXP3Q9BZS1 AL096701.2-201ENST00000416920 238 ntBASIC4.29□□□□□ -1.72
FOXP3Q9BZS1 AL157831.1-201ENST00000426134 473 ntBASIC4.29□□□□□ -1.72
FOXP3Q9BZS1 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.29□□□□□ -1.72
FOXP3Q9BZS1 OR4C10P-201ENST00000434991 931 ntBASIC4.29□□□□□ -1.72
FOXP3Q9BZS1 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.29□□□□□ -1.72
FOXP3Q9BZS1 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.29□□□□□ -1.72
FOXP3Q9BZS1 SUMO1P2-201ENST00000452524 304 ntBASIC4.29□□□□□ -1.72
FOXP3Q9BZS1 RNU6-1037P-201ENST00000459571 107 ntBASIC4.29□□□□□ -1.72
FOXP3Q9BZS1 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.29□□□□□ -1.72
FOXP3Q9BZS1 RNU6-1023P-201ENST00000516137 106 ntBASIC4.29□□□□□ -1.72
FOXP3Q9BZS1 RNU6-143P-201ENST00000516942 93 ntBASIC4.29□□□□□ -1.72
FOXP3Q9BZS1 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.29□□□□□ -1.72
FOXP3Q9BZS1 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
FOXP3Q9BZS1 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.29□□□□□ -1.72
FOXP3Q9BZS1 AC004584.2-201ENST00000570407 410 ntBASIC4.29□□□□□ -1.72
FOXP3Q9BZS1 MIR3128-201ENST00000581957 66 ntBASIC4.29□□□□□ -1.72
FOXP3Q9BZS1 SNORD84-203ENST00000584275 78 ntBASIC4.29□□□□□ -1.72
FOXP3Q9BZS1 AC113403.1-201ENST00000604910 193 ntBASIC4.29□□□□□ -1.72
FOXP3Q9BZS1 AL591034.3-201ENST00000605511 685 ntBASIC4.29□□□□□ -1.72
FOXP3Q9BZS1 AL365434.2-201ENST00000607979 234 ntBASIC4.29□□□□□ -1.72
FOXP3Q9BZS1 MIR3653-201ENST00000625572 110 ntBASIC4.29□□□□□ -1.72
FOXP3Q9BZS1 AC140479.6-201ENST00000633535 357 ntBASIC4.29□□□□□ -1.72
FOXP3Q9BZS1 U6.104-201ENST00000637979 90 ntBASIC4.29□□□□□ -1.72
FOXP3Q9BZS1 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
FOXP3Q9BZS1 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
FOXP3Q9BZS1 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
FOXP3Q9BZS1 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
FOXP3Q9BZS1 ZNF962P-201ENST00000443465 3140 ntBASIC4.29□□□□□ -1.72
FOXP3Q9BZS1 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
FOXP3Q9BZS1 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
FOXP3Q9BZS1 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.28□□□□□ -1.72
FOXP3Q9BZS1 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.28□□□□□ -1.72
FOXP3Q9BZS1 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
FOXP3Q9BZS1 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
FOXP3Q9BZS1 MIR383-201ENST00000362257 73 ntBASIC4.28□□□□□ -1.72
FOXP3Q9BZS1 Y_RNA.26-201ENST00000362539 101 ntBASIC4.28□□□□□ -1.72
FOXP3Q9BZS1 Y_RNA.33-201ENST00000362591 102 ntBASIC4.28□□□□□ -1.72
FOXP3Q9BZS1 RNU5A-1-201ENST00000362698 116 ntBASIC4.28□□□□□ -1.72
FOXP3Q9BZS1 Y_RNA.64-201ENST00000362845 102 ntBASIC4.28□□□□□ -1.72
FOXP3Q9BZS1 RNU6-770P-201ENST00000363929 105 ntBASIC4.28□□□□□ -1.72
FOXP3Q9BZS1 Y_RNA.533-201ENST00000384596 114 ntBASIC4.28□□□□□ -1.72
FOXP3Q9BZS1 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
FOXP3Q9BZS1 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
FOXP3Q9BZS1 RNA5SP317-201ENST00000410176 116 ntBASIC4.28□□□□□ -1.72
FOXP3Q9BZS1 RNU2-38P-201ENST00000410856 79 ntBASIC4.28□□□□□ -1.72
FOXP3Q9BZS1 RNA5SP311-201ENST00000411290 116 ntBASIC4.28□□□□□ -1.72
FOXP3Q9BZS1 AC092573.2-201ENST00000434546 243 ntBASIC4.28□□□□□ -1.72
FOXP3Q9BZS1 OR2AQ1P-201ENST00000451972 200 ntBASIC4.28□□□□□ -1.72
FOXP3Q9BZS1 RPS29P19-201ENST00000479709 171 ntBASIC4.28□□□□□ -1.72
FOXP3Q9BZS1 RN7SL271P-201ENST00000487601 295 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms