Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0.97□□□□□ -2.25
SCAPERQ9BY12 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC0.97□□□□□ -2.25
SCAPERQ9BY12 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC0.97□□□□□ -2.25
SCAPERQ9BY12 AC104073.1-201ENST00000451988 151 ntBASIC0.97□□□□□ -2.25
SCAPERQ9BY12 MRPS17P3-201ENST00000465453 385 ntBASIC0.97□□□□□ -2.25
SCAPERQ9BY12 HMGB1P36-201ENST00000487709 576 ntBASIC0.97□□□□□ -2.25
SCAPERQ9BY12 AC108078.1-201ENST00000508073 725 ntBASIC0.97□□□□□ -2.25
SCAPERQ9BY12 EEF1B2P4-201ENST00000551398 348 ntBASIC0.97□□□□□ -2.25
SCAPERQ9BY12 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC0.97□□□□□ -2.25
SCAPERQ9BY12 AL391261.3-201ENST00000557194 520 ntBASIC0.97□□□□□ -2.25
SCAPERQ9BY12 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC0.97□□□□□ -2.25
SCAPERQ9BY12 AC010738.1-201ENST00000604970 987 ntBASIC0.97□□□□□ -2.25
SCAPERQ9BY12 AC091925.2-201ENST00000625059 256 ntBASIC0.97□□□□□ -2.25
SCAPERQ9BY12 AL049641.1-201ENST00000441055 1948 ntBASIC0.97□□□□□ -2.25
SCAPERQ9BY12 U6atac.2-201ENST00000408644 118 ntBASIC0.96□□□□□ -2.26
SCAPERQ9BY12 AC010385.1-201ENST00000412374 256 ntBASIC0.96□□□□□ -2.26
SCAPERQ9BY12 VPS26AP1-201ENST00000483197 979 ntBASIC0.96□□□□□ -2.26
SCAPERQ9BY12 AC025459.1-201ENST00000504072 156 ntBASIC0.96□□□□□ -2.26
SCAPERQ9BY12 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
SCAPERQ9BY12 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC0.96□□□□□ -2.26
SCAPERQ9BY12 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.96□□□□□ -2.26
SCAPERQ9BY12 VBP1-203ENST00000535916 944 ntTSL 2 BASIC0.96□□□□□ -2.26
SCAPERQ9BY12 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC0.96□□□□□ -2.26
SCAPERQ9BY12 AC012435.1-202ENST00000568772 240 ntBASIC0.96□□□□□ -2.26
SCAPERQ9BY12 AC105224.1-201ENST00000587055 421 ntBASIC0.96□□□□□ -2.26
SCAPERQ9BY12 HSPE1P19-201ENST00000603327 295 ntBASIC0.96□□□□□ -2.26
SCAPERQ9BY12 FRG1HP-204ENST00000617940 757 ntBASIC0.96□□□□□ -2.26
SCAPERQ9BY12 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC0.95□□□□□ -2.26
SCAPERQ9BY12 SNORA25.8-201ENST00000364831 128 ntBASIC0.95□□□□□ -2.26
SCAPERQ9BY12 SNORA70.7-201ENST00000384159 133 ntBASIC0.95□□□□□ -2.26
SCAPERQ9BY12 NDUFS5P1-201ENST00000405668 289 ntBASIC0.95□□□□□ -2.26
SCAPERQ9BY12 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC0.95□□□□□ -2.26
SCAPERQ9BY12 AC114982.2-201ENST00000461396 358 ntBASIC0.95□□□□□ -2.26
SCAPERQ9BY12 AC008379.1-201ENST00000463655 464 ntBASIC0.95□□□□□ -2.26
SCAPERQ9BY12 RNU6-362P-201ENST00000516736 90 ntBASIC0.95□□□□□ -2.26
SCAPERQ9BY12 SNORA44.1-201ENST00000517031 108 ntBASIC0.95□□□□□ -2.26
SCAPERQ9BY12 AC008498.1-201ENST00000613012 531 ntBASIC0.95□□□□□ -2.26
SCAPERQ9BY12 AC090772.4-201ENST00000623599 362 ntBASIC0.95□□□□□ -2.26
SCAPERQ9BY12 AC092192.1-201ENST00000633154 1018 ntBASIC0.95□□□□□ -2.26
SCAPERQ9BY12 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
SCAPERQ9BY12 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
SCAPERQ9BY12 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.94□□□□□ -2.26
SCAPERQ9BY12 RNU6-338P-201ENST00000383888 105 ntBASIC0.94□□□□□ -2.26
SCAPERQ9BY12 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.94□□□□□ -2.26
SCAPERQ9BY12 SNORA40.19-201ENST00000390846 128 ntBASIC0.94□□□□□ -2.26
SCAPERQ9BY12 MIR1197-201ENST00000408818 88 ntBASIC0.94□□□□□ -2.26
SCAPERQ9BY12 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC0.94□□□□□ -2.26
SCAPERQ9BY12 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC0.94□□□□□ -2.26
SCAPERQ9BY12 RAC1P7-201ENST00000445367 377 ntBASIC0.94□□□□□ -2.26
SCAPERQ9BY12 HMGB1P35-201ENST00000503360 598 ntBASIC0.94□□□□□ -2.26
SCAPERQ9BY12 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC0.94□□□□□ -2.26
SCAPERQ9BY12 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.94□□□□□ -2.26
SCAPERQ9BY12 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.94□□□□□ -2.26
SCAPERQ9BY12 AC074051.3-201ENST00000570238 358 ntBASIC0.94□□□□□ -2.26
SCAPERQ9BY12 AL138478.1-201ENST00000612252 832 ntBASIC0.94□□□□□ -2.26
SCAPERQ9BY12 AC018926.3-201ENST00000618841 406 ntBASIC0.94□□□□□ -2.26
SCAPERQ9BY12 ZNF663P-202ENST00000641770 1131 ntBASIC0.94□□□□□ -2.26
SCAPERQ9BY12 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.94□□□□□ -2.26
SCAPERQ9BY12 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC0.93□□□□□ -2.26
SCAPERQ9BY12 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
SCAPERQ9BY12 Y_RNA.433-201ENST00000384089 102 ntBASIC0.93□□□□□ -2.26
SCAPERQ9BY12 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC0.93□□□□□ -2.26
SCAPERQ9BY12 AL035410.1-201ENST00000427409 427 ntBASIC0.93□□□□□ -2.26
SCAPERQ9BY12 FO393419.3-201ENST00000428741 282 ntBASIC0.93□□□□□ -2.26
SCAPERQ9BY12 AC241584.1-201ENST00000438469 1241 ntBASIC0.93□□□□□ -2.26
SCAPERQ9BY12 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
SCAPERQ9BY12 AL049734.2-201ENST00000441066 616 ntBASIC0.93□□□□□ -2.26
SCAPERQ9BY12 PTENP1-201ENST00000447117 1215 ntBASIC0.93□□□□□ -2.26
SCAPERQ9BY12 HESX1-202ENST00000473921 757 ntTSL 5 BASIC0.93□□□□□ -2.26
SCAPERQ9BY12 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC0.93□□□□□ -2.26
SCAPERQ9BY12 AC138853.1-201ENST00000503549 823 ntBASIC0.93□□□□□ -2.26
SCAPERQ9BY12 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.93□□□□□ -2.26
SCAPERQ9BY12 AC098591.2-201ENST00000510152 315 ntBASIC0.93□□□□□ -2.26
SCAPERQ9BY12 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.93□□□□□ -2.26
SCAPERQ9BY12 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC0.93□□□□□ -2.26
SCAPERQ9BY12 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC0.93□□□□□ -2.26
SCAPERQ9BY12 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC0.93□□□□□ -2.26
SCAPERQ9BY12 AP000403.1-201ENST00000603349 851 ntBASIC0.93□□□□□ -2.26
SCAPERQ9BY12 AC008443.7-201ENST00000622195 246 ntBASIC0.93□□□□□ -2.26
SCAPERQ9BY12 AL118508.4-201ENST00000624142 1176 ntBASIC0.93□□□□□ -2.26
SCAPERQ9BY12 AP000776.1-201ENST00000530032 1663 ntBASIC0.93□□□□□ -2.26
SCAPERQ9BY12 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
SCAPERQ9BY12 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
SCAPERQ9BY12 RNU6-748P-201ENST00000384648 107 ntBASIC0.92□□□□□ -2.26
SCAPERQ9BY12 MIR515-2-201ENST00000384883 83 ntBASIC0.92□□□□□ -2.26
SCAPERQ9BY12 MIR515-1-201ENST00000384884 83 ntBASIC0.92□□□□□ -2.26
SCAPERQ9BY12 AL590383.1-201ENST00000428602 75 ntBASIC0.92□□□□□ -2.26
SCAPERQ9BY12 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC0.92□□□□□ -2.26
SCAPERQ9BY12 AC024082.2-201ENST00000434771 238 ntBASIC0.92□□□□□ -2.26
SCAPERQ9BY12 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.92□□□□□ -2.26
SCAPERQ9BY12 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.92□□□□□ -2.26
SCAPERQ9BY12 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC0.92□□□□□ -2.26
SCAPERQ9BY12 RNU5A-7P-201ENST00000515979 116 ntBASIC0.92□□□□□ -2.26
SCAPERQ9BY12 RNU6-202P-201ENST00000515998 96 ntBASIC0.92□□□□□ -2.26
SCAPERQ9BY12 SNORA31.6-201ENST00000516241 130 ntBASIC0.92□□□□□ -2.26
SCAPERQ9BY12 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.92□□□□□ -2.26
SCAPERQ9BY12 AC008945.2-201ENST00000606056 604 ntBASIC0.92□□□□□ -2.26
SCAPERQ9BY12 AL355802.3-201ENST00000607571 545 ntBASIC0.92□□□□□ -2.26
SCAPERQ9BY12 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.92□□□□□ -2.26
SCAPERQ9BY12 RNA5SP62-201ENST00000363457 110 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms