Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.85□□□□□ -1.63
COL25A1Q9BXS0 AL121772.2-201ENST00000614331 297 ntBASIC4.85□□□□□ -1.63
COL25A1Q9BXS0 AC068831.7-201ENST00000616954 363 ntBASIC4.85□□□□□ -1.63
COL25A1Q9BXS0 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
COL25A1Q9BXS0 snoZ196.1-201ENST00000625269 89 ntBASIC4.85□□□□□ -1.63
COL25A1Q9BXS0 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.85□□□□□ -1.63
COL25A1Q9BXS0 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.85□□□□□ -1.63
COL25A1Q9BXS0 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
COL25A1Q9BXS0 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
COL25A1Q9BXS0 ZNF137P-201ENST00000456718 1920 ntBASIC4.85□□□□□ -1.63
COL25A1Q9BXS0 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL25A1Q9BXS0 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC4.85□□□□□ -1.63
COL25A1Q9BXS0 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
COL25A1Q9BXS0 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.85□□□□□ -1.63
COL25A1Q9BXS0 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.85□□□□□ -1.63
COL25A1Q9BXS0 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL25A1Q9BXS0 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.84□□□□□ -1.63
COL25A1Q9BXS0 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.84□□□□□ -1.63
COL25A1Q9BXS0 AC009812.4-201ENST00000569134 1805 ntBASIC4.84□□□□□ -1.63
COL25A1Q9BXS0 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL25A1Q9BXS0 Y_RNA.116-201ENST00000363292 103 ntBASIC4.84□□□□□ -1.63
COL25A1Q9BXS0 RNU1-83P-201ENST00000363426 164 ntBASIC4.84□□□□□ -1.63
COL25A1Q9BXS0 Y_RNA.337-201ENST00000365312 102 ntBASIC4.84□□□□□ -1.63
COL25A1Q9BXS0 RNU6-460P-201ENST00000391158 108 ntBASIC4.84□□□□□ -1.63
COL25A1Q9BXS0 UBA52P6-201ENST00000399822 382 ntBASIC4.84□□□□□ -1.63
COL25A1Q9BXS0 RN7SKP267-201ENST00000410381 285 ntBASIC4.84□□□□□ -1.63
COL25A1Q9BXS0 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.84□□□□□ -1.63
COL25A1Q9BXS0 AC005042.3-201ENST00000453230 174 ntBASIC4.84□□□□□ -1.63
COL25A1Q9BXS0 AC092991.1-201ENST00000477176 376 ntBASIC4.84□□□□□ -1.63
COL25A1Q9BXS0 AL391261.3-201ENST00000557194 520 ntBASIC4.84□□□□□ -1.63
COL25A1Q9BXS0 MIR4744-201ENST00000581563 82 ntBASIC4.84□□□□□ -1.63
COL25A1Q9BXS0 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.84□□□□□ -1.63
COL25A1Q9BXS0 AC005176.2-201ENST00000596933 147 ntBASIC4.84□□□□□ -1.63
COL25A1Q9BXS0 AC008121.1-201ENST00000603244 268 ntBASIC4.84□□□□□ -1.63
COL25A1Q9BXS0 MIR8059-201ENST00000620427 81 ntBASIC4.84□□□□□ -1.63
COL25A1Q9BXS0 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL25A1Q9BXS0 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL25A1Q9BXS0 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
COL25A1Q9BXS0 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL25A1Q9BXS0 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
COL25A1Q9BXS0 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
COL25A1Q9BXS0 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.64
COL25A1Q9BXS0 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.64
COL25A1Q9BXS0 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
COL25A1Q9BXS0 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC4.83□□□□□ -1.64
COL25A1Q9BXS0 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
COL25A1Q9BXS0 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
COL25A1Q9BXS0 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
COL25A1Q9BXS0 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL25A1Q9BXS0 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.83□□□□□ -1.64
COL25A1Q9BXS0 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL25A1Q9BXS0 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC4.83□□□□□ -1.64
COL25A1Q9BXS0 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
COL25A1Q9BXS0 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
COL25A1Q9BXS0 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
COL25A1Q9BXS0 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
COL25A1Q9BXS0 Y_RNA.495-201ENST00000384435 112 ntBASIC4.83□□□□□ -1.64
COL25A1Q9BXS0 MIR32-201ENST00000384965 70 ntBASIC4.83□□□□□ -1.64
COL25A1Q9BXS0 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.83□□□□□ -1.64
COL25A1Q9BXS0 AC090804.1-201ENST00000448870 490 ntBASIC4.83□□□□□ -1.64
COL25A1Q9BXS0 RPL12P39-201ENST00000455456 496 ntBASIC4.83□□□□□ -1.64
COL25A1Q9BXS0 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.83□□□□□ -1.64
COL25A1Q9BXS0 AC104164.2-201ENST00000496953 495 ntBASIC4.83□□□□□ -1.64
COL25A1Q9BXS0 IGKV2D-36-201ENST00000518643 226 ntBASIC4.83□□□□□ -1.64
COL25A1Q9BXS0 AC008489.1-201ENST00000524271 483 ntBASIC4.83□□□□□ -1.64
COL25A1Q9BXS0 AC100767.1-201ENST00000528178 123 ntBASIC4.83□□□□□ -1.64
COL25A1Q9BXS0 AC090877.1-201ENST00000561418 344 ntBASIC4.83□□□□□ -1.64
COL25A1Q9BXS0 MIR4782-201ENST00000577987 79 ntBASIC4.83□□□□□ -1.64
COL25A1Q9BXS0 U7.2-201ENST00000607576 63 ntBASIC4.83□□□□□ -1.64
COL25A1Q9BXS0 MIR6715A-201ENST00000615929 79 ntBASIC4.83□□□□□ -1.64
COL25A1Q9BXS0 RNA5SP439-201ENST00000617595 124 ntBASIC4.83□□□□□ -1.64
COL25A1Q9BXS0 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.83□□□□□ -1.64
COL25A1Q9BXS0 MVP-219ENST00000629059 120 ntTSL 5 BASIC4.83□□□□□ -1.64
COL25A1Q9BXS0 MIR4275-201ENST00000636486 87 ntBASIC4.83□□□□□ -1.64
COL25A1Q9BXS0 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC4.83□□□□□ -1.64
COL25A1Q9BXS0 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL25A1Q9BXS0 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.83□□□□□ -1.64
COL25A1Q9BXS0 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL25A1Q9BXS0 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL25A1Q9BXS0 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL25A1Q9BXS0 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
COL25A1Q9BXS0 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.82□□□□□ -1.64
COL25A1Q9BXS0 AC004076.2-201ENST00000620532 3323 ntBASIC4.82□□□□□ -1.64
COL25A1Q9BXS0 MIR412-201ENST00000362142 91 ntBASIC4.82□□□□□ -1.64
COL25A1Q9BXS0 MIR301A-201ENST00000385261 86 ntBASIC4.82□□□□□ -1.64
COL25A1Q9BXS0 AL158823.1-201ENST00000418441 478 ntBASIC4.82□□□□□ -1.64
COL25A1Q9BXS0 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.82□□□□□ -1.64
COL25A1Q9BXS0 MRPL48P1-201ENST00000445390 636 ntBASIC4.82□□□□□ -1.64
COL25A1Q9BXS0 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
COL25A1Q9BXS0 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.82□□□□□ -1.64
COL25A1Q9BXS0 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.82□□□□□ -1.64
COL25A1Q9BXS0 AP001328.1-201ENST00000528550 176 ntBASIC4.82□□□□□ -1.64
COL25A1Q9BXS0 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.82□□□□□ -1.64
COL25A1Q9BXS0 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL25A1Q9BXS0 AC105129.1-201ENST00000560250 297 ntBASIC4.82□□□□□ -1.64
COL25A1Q9BXS0 MIR5699-201ENST00000578903 90 ntBASIC4.82□□□□□ -1.64
COL25A1Q9BXS0 MIR5685-201ENST00000579080 79 ntBASIC4.82□□□□□ -1.64
COL25A1Q9BXS0 LARP7P3-201ENST00000579888 337 ntBASIC4.82□□□□□ -1.64
COL25A1Q9BXS0 MIR3145-201ENST00000580727 82 ntBASIC4.82□□□□□ -1.64
COL25A1Q9BXS0 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms