Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.33□□□□□ -2.04
RPAP1Q9BWH6 AC010889.1-201ENST00000566193 2666 ntBASIC2.33□□□□□ -2.04
RPAP1Q9BWH6 UBE2L2-201ENST00000254302 429 ntBASIC2.33□□□□□ -2.04
RPAP1Q9BWH6 RNU6-1284P-201ENST00000363701 100 ntBASIC2.33□□□□□ -2.04
RPAP1Q9BWH6 RNU2-40P-201ENST00000410833 196 ntBASIC2.33□□□□□ -2.04
RPAP1Q9BWH6 RNU2-68P-201ENST00000410878 191 ntBASIC2.33□□□□□ -2.04
RPAP1Q9BWH6 RNU6-1328P-201ENST00000410938 106 ntBASIC2.33□□□□□ -2.04
RPAP1Q9BWH6 AC078974.1-201ENST00000411597 223 ntBASIC2.33□□□□□ -2.04
RPAP1Q9BWH6 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.33□□□□□ -2.04
RPAP1Q9BWH6 AL008987.1-201ENST00000415528 237 ntBASIC2.33□□□□□ -2.04
RPAP1Q9BWH6 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.33□□□□□ -2.04
RPAP1Q9BWH6 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.33□□□□□ -2.04
RPAP1Q9BWH6 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.33□□□□□ -2.04
RPAP1Q9BWH6 AC108667.1-201ENST00000428618 249 ntBASIC2.33□□□□□ -2.04
RPAP1Q9BWH6 GPM6BP2-201ENST00000432046 144 ntBASIC2.33□□□□□ -2.04
RPAP1Q9BWH6 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.33□□□□□ -2.04
RPAP1Q9BWH6 GPM6BP1-201ENST00000446387 144 ntBASIC2.33□□□□□ -2.04
RPAP1Q9BWH6 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.33□□□□□ -2.04
RPAP1Q9BWH6 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.33□□□□□ -2.04
RPAP1Q9BWH6 RNU5F-8P-201ENST00000515941 111 ntBASIC2.33□□□□□ -2.04
RPAP1Q9BWH6 SNORA31.18-201ENST00000517043 134 ntBASIC2.33□□□□□ -2.04
RPAP1Q9BWH6 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.33□□□□□ -2.04
RPAP1Q9BWH6 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.33□□□□□ -2.04
RPAP1Q9BWH6 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.33□□□□□ -2.04
RPAP1Q9BWH6 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.33□□□□□ -2.04
RPAP1Q9BWH6 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.33□□□□□ -2.04
RPAP1Q9BWH6 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.33□□□□□ -2.04
RPAP1Q9BWH6 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.33□□□□□ -2.04
RPAP1Q9BWH6 BNIP3P40-201ENST00000596017 556 ntBASIC2.33□□□□□ -2.04
RPAP1Q9BWH6 AL031281.1-201ENST00000604049 488 ntBASIC2.33□□□□□ -2.04
RPAP1Q9BWH6 APOOP1-201ENST00000604695 592 ntBASIC2.33□□□□□ -2.04
RPAP1Q9BWH6 snoU13.31-201ENST00000607291 104 ntBASIC2.33□□□□□ -2.04
RPAP1Q9BWH6 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.33□□□□□ -2.04
RPAP1Q9BWH6 AP002782.1-201ENST00000623107 614 ntBASIC2.33□□□□□ -2.04
RPAP1Q9BWH6 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.33□□□□□ -2.04
RPAP1Q9BWH6 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.32□□□□□ -2.04
RPAP1Q9BWH6 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
RPAP1Q9BWH6 MTND4P16-201ENST00000466108 1367 ntBASIC2.32□□□□□ -2.04
RPAP1Q9BWH6 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
RPAP1Q9BWH6 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
RPAP1Q9BWH6 RNU6-512P-201ENST00000364438 103 ntBASIC2.32□□□□□ -2.04
RPAP1Q9BWH6 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.32□□□□□ -2.04
RPAP1Q9BWH6 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.32□□□□□ -2.04
RPAP1Q9BWH6 AC096649.2-201ENST00000416186 393 ntBASIC2.32□□□□□ -2.04
RPAP1Q9BWH6 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.32□□□□□ -2.04
RPAP1Q9BWH6 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.32□□□□□ -2.04
RPAP1Q9BWH6 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.32□□□□□ -2.04
RPAP1Q9BWH6 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.32□□□□□ -2.04
RPAP1Q9BWH6 HMGB1P9-201ENST00000429856 646 ntBASIC2.32□□□□□ -2.04
RPAP1Q9BWH6 UBE2FP3-201ENST00000436366 524 ntBASIC2.32□□□□□ -2.04
RPAP1Q9BWH6 AC098831.1-201ENST00000440661 216 ntBASIC2.32□□□□□ -2.04
RPAP1Q9BWH6 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
RPAP1Q9BWH6 AC090515.1-201ENST00000465295 476 ntBASIC2.32□□□□□ -2.04
RPAP1Q9BWH6 RPL23AP41-201ENST00000484754 458 ntBASIC2.32□□□□□ -2.04
RPAP1Q9BWH6 TPT1P8-201ENST00000510120 555 ntBASIC2.32□□□□□ -2.04
RPAP1Q9BWH6 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.32□□□□□ -2.04
RPAP1Q9BWH6 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.32□□□□□ -2.04
RPAP1Q9BWH6 GNAI2P1-201ENST00000541815 315 ntBASIC2.32□□□□□ -2.04
RPAP1Q9BWH6 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.32□□□□□ -2.04
RPAP1Q9BWH6 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.32□□□□□ -2.04
RPAP1Q9BWH6 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.32□□□□□ -2.04
RPAP1Q9BWH6 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.32□□□□□ -2.04
RPAP1Q9BWH6 AC013244.3-201ENST00000605614 388 ntBASIC2.32□□□□□ -2.04
RPAP1Q9BWH6 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
RPAP1Q9BWH6 MIR3199-2-201ENST00000636243 86 ntBASIC2.32□□□□□ -2.04
RPAP1Q9BWH6 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
RPAP1Q9BWH6 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
RPAP1Q9BWH6 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.31□□□□□ -2.04
RPAP1Q9BWH6 RNU5A-8P-201ENST00000364102 114 ntBASIC2.31□□□□□ -2.04
RPAP1Q9BWH6 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.31□□□□□ -2.04
RPAP1Q9BWH6 MIR1287-201ENST00000408492 90 ntBASIC2.31□□□□□ -2.04
RPAP1Q9BWH6 AL022400.1-201ENST00000423946 935 ntBASIC2.31□□□□□ -2.04
RPAP1Q9BWH6 AL353729.1-201ENST00000425044 720 ntBASIC2.31□□□□□ -2.04
RPAP1Q9BWH6 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
RPAP1Q9BWH6 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.31□□□□□ -2.04
RPAP1Q9BWH6 IPO7P1-201ENST00000442031 636 ntBASIC2.31□□□□□ -2.04
RPAP1Q9BWH6 ANKRD26P4-201ENST00000455755 950 ntBASIC2.31□□□□□ -2.04
RPAP1Q9BWH6 AC108059.3-201ENST00000456388 214 ntBASIC2.31□□□□□ -2.04
RPAP1Q9BWH6 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC2.31□□□□□ -2.04
RPAP1Q9BWH6 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
RPAP1Q9BWH6 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.31□□□□□ -2.04
RPAP1Q9BWH6 SNORA31.3-201ENST00000516029 96 ntBASIC2.31□□□□□ -2.04
RPAP1Q9BWH6 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.31□□□□□ -2.04
RPAP1Q9BWH6 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.31□□□□□ -2.04
RPAP1Q9BWH6 AC007151.1-201ENST00000572774 483 ntBASIC2.31□□□□□ -2.04
RPAP1Q9BWH6 MIR4255-201ENST00000579351 72 ntBASIC2.31□□□□□ -2.04
RPAP1Q9BWH6 MIR4999-201ENST00000585029 91 ntBASIC2.31□□□□□ -2.04
RPAP1Q9BWH6 MIR4781-201ENST00000585250 76 ntBASIC2.31□□□□□ -2.04
RPAP1Q9BWH6 AL356280.1-201ENST00000603614 379 ntBASIC2.31□□□□□ -2.04
RPAP1Q9BWH6 OR10AB1P-201ENST00000609613 938 ntBASIC2.31□□□□□ -2.04
RPAP1Q9BWH6 DUSP12P1-201ENST00000612874 516 ntBASIC2.31□□□□□ -2.04
RPAP1Q9BWH6 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
RPAP1Q9BWH6 AC021755.4-201ENST00000616620 456 ntBASIC2.31□□□□□ -2.04
RPAP1Q9BWH6 AL031601.2-202ENST00000622650 282 ntBASIC2.31□□□□□ -2.04
RPAP1Q9BWH6 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
RPAP1Q9BWH6 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
RPAP1Q9BWH6 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
RPAP1Q9BWH6 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.3□□□□□ -2.04
RPAP1Q9BWH6 Y_RNA.302-201ENST00000364997 102 ntBASIC2.3□□□□□ -2.04
RPAP1Q9BWH6 RNU6-1200P-201ENST00000384162 107 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms