Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PCGF1Q9BSM1 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PCGF1Q9BSM1 RNA5SP387-201ENST00000364226 106 ntBASIC2.91□□□□□ -1.94
PCGF1Q9BSM1 SNORD14B-201ENST00000364533 90 ntBASIC2.91□□□□□ -1.94
PCGF1Q9BSM1 RNU6-1303P-201ENST00000364841 107 ntBASIC2.91□□□□□ -1.94
PCGF1Q9BSM1 RNU6-384P-201ENST00000364900 104 ntBASIC2.91□□□□□ -1.94
PCGF1Q9BSM1 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PCGF1Q9BSM1 MIR183-201ENST00000384958 110 ntBASIC2.91□□□□□ -1.94
PCGF1Q9BSM1 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
PCGF1Q9BSM1 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PCGF1Q9BSM1 RNA5SP44-201ENST00000410446 133 ntBASIC2.91□□□□□ -1.94
PCGF1Q9BSM1 RNU6-607P-201ENST00000411283 108 ntBASIC2.91□□□□□ -1.94
PCGF1Q9BSM1 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.91□□□□□ -1.94
PCGF1Q9BSM1 BX682237.1-201ENST00000415016 335 ntBASIC2.91□□□□□ -1.94
PCGF1Q9BSM1 AL365496.1-201ENST00000426885 215 ntBASIC2.91□□□□□ -1.94
PCGF1Q9BSM1 AC005300.1-201ENST00000428401 373 ntBASIC2.91□□□□□ -1.94
PCGF1Q9BSM1 SRIP2-201ENST00000428470 166 ntBASIC2.91□□□□□ -1.94
PCGF1Q9BSM1 HMGB1P9-201ENST00000429856 646 ntBASIC2.91□□□□□ -1.94
PCGF1Q9BSM1 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.91□□□□□ -1.94
PCGF1Q9BSM1 BX679664.1-201ENST00000434429 253 ntBASIC2.91□□□□□ -1.94
PCGF1Q9BSM1 RBMX2P4-201ENST00000441256 376 ntBASIC2.91□□□□□ -1.94
PCGF1Q9BSM1 CALM1P1-201ENST00000442082 433 ntBASIC2.91□□□□□ -1.94
PCGF1Q9BSM1 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.91□□□□□ -1.94
PCGF1Q9BSM1 NDUFB1P2-201ENST00000449477 176 ntBASIC2.91□□□□□ -1.94
PCGF1Q9BSM1 RPL21P99-201ENST00000480369 423 ntBASIC2.91□□□□□ -1.94
PCGF1Q9BSM1 AC091885.1-201ENST00000506658 268 ntBASIC2.91□□□□□ -1.94
PCGF1Q9BSM1 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.91□□□□□ -1.94
PCGF1Q9BSM1 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.91□□□□□ -1.94
PCGF1Q9BSM1 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.91□□□□□ -1.94
PCGF1Q9BSM1 CENPUP1-201ENST00000526649 1202 ntBASIC2.91□□□□□ -1.94
PCGF1Q9BSM1 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.91□□□□□ -1.94
PCGF1Q9BSM1 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC2.91□□□□□ -1.94
PCGF1Q9BSM1 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC2.91□□□□□ -1.94
PCGF1Q9BSM1 AC078814.3-201ENST00000553036 491 ntBASIC2.91□□□□□ -1.94
PCGF1Q9BSM1 MIR4782-201ENST00000577987 79 ntBASIC2.91□□□□□ -1.94
PCGF1Q9BSM1 LRRC37A5P-203ENST00000580181 585 ntBASIC2.91□□□□□ -1.94
PCGF1Q9BSM1 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.91□□□□□ -1.94
PCGF1Q9BSM1 AL035413.2-201ENST00000604801 525 ntBASIC2.91□□□□□ -1.94
PCGF1Q9BSM1 RNU6-89P-201ENST00000606519 100 ntBASIC2.91□□□□□ -1.94
PCGF1Q9BSM1 RMST_4.1-201ENST00000616886 107 ntBASIC2.91□□□□□ -1.94
PCGF1Q9BSM1 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.91□□□□□ -1.94
PCGF1Q9BSM1 U6.105-201ENST00000637379 88 ntBASIC2.91□□□□□ -1.94
PCGF1Q9BSM1 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
PCGF1Q9BSM1 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PCGF1Q9BSM1 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.91□□□□□ -1.94
PCGF1Q9BSM1 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC2.91□□□□□ -1.94
PCGF1Q9BSM1 AC004520.1-201ENST00000608362 1413 ntBASIC2.91□□□□□ -1.94
PCGF1Q9BSM1 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.91□□□□□ -1.94
PCGF1Q9BSM1 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.94
PCGF1Q9BSM1 AC110491.1-201ENST00000562191 2010 ntBASIC2.9□□□□□ -1.94
PCGF1Q9BSM1 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
PCGF1Q9BSM1 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
PCGF1Q9BSM1 MIR30E-201ENST00000362104 92 ntBASIC2.9□□□□□ -1.95
PCGF1Q9BSM1 RNU6-1283P-201ENST00000365314 105 ntBASIC2.9□□□□□ -1.95
PCGF1Q9BSM1 Y_RNA.378-201ENST00000365652 113 ntBASIC2.9□□□□□ -1.95
PCGF1Q9BSM1 MIR34B-201ENST00000385076 84 ntBASIC2.9□□□□□ -1.95
PCGF1Q9BSM1 AL356057.2-201ENST00000403318 432 ntBASIC2.9□□□□□ -1.95
PCGF1Q9BSM1 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.9□□□□□ -1.95
PCGF1Q9BSM1 RNU2-3P-201ENST00000410144 191 ntBASIC2.9□□□□□ -1.95
PCGF1Q9BSM1 RN7SKP123-201ENST00000410732 291 ntBASIC2.9□□□□□ -1.95
PCGF1Q9BSM1 AC023141.4-201ENST00000412031 328 ntBASIC2.9□□□□□ -1.95
PCGF1Q9BSM1 MTND1P23-201ENST00000416931 372 ntBASIC2.9□□□□□ -1.95
PCGF1Q9BSM1 ERLEC1P1-201ENST00000433806 578 ntBASIC2.9□□□□□ -1.95
PCGF1Q9BSM1 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.9□□□□□ -1.95
PCGF1Q9BSM1 RPL23AP22-201ENST00000437556 453 ntBASIC2.9□□□□□ -1.95
PCGF1Q9BSM1 AL121601.2-201ENST00000438019 707 ntBASIC2.9□□□□□ -1.95
PCGF1Q9BSM1 PRPS1P1-201ENST00000445305 876 ntBASIC2.9□□□□□ -1.95
PCGF1Q9BSM1 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.9□□□□□ -1.95
PCGF1Q9BSM1 DYNLL1P5-201ENST00000467158 270 ntBASIC2.9□□□□□ -1.95
PCGF1Q9BSM1 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.9□□□□□ -1.95
PCGF1Q9BSM1 AC026801.1-201ENST00000497178 464 ntBASIC2.9□□□□□ -1.95
PCGF1Q9BSM1 AC074250.1-201ENST00000511117 192 ntBASIC2.9□□□□□ -1.95
PCGF1Q9BSM1 AC074344.1-201ENST00000512823 224 ntBASIC2.9□□□□□ -1.95
PCGF1Q9BSM1 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.9□□□□□ -1.95
PCGF1Q9BSM1 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.9□□□□□ -1.95
PCGF1Q9BSM1 AC011611.1-201ENST00000552179 197 ntBASIC2.9□□□□□ -1.95
PCGF1Q9BSM1 OR11H5P-201ENST00000554039 926 ntBASIC2.9□□□□□ -1.95
PCGF1Q9BSM1 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.9□□□□□ -1.95
PCGF1Q9BSM1 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.9□□□□□ -1.95
PCGF1Q9BSM1 AC010653.1-201ENST00000571108 881 ntBASIC2.9□□□□□ -1.95
PCGF1Q9BSM1 NRBF2P5-201ENST00000603087 788 ntBASIC2.9□□□□□ -1.95
PCGF1Q9BSM1 NUTF2P8-201ENST00000604593 363 ntBASIC2.9□□□□□ -1.95
PCGF1Q9BSM1 AL020991.1-201ENST00000612314 373 ntBASIC2.9□□□□□ -1.95
PCGF1Q9BSM1 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
PCGF1Q9BSM1 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
PCGF1Q9BSM1 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
PCGF1Q9BSM1 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.9□□□□□ -1.95
PCGF1Q9BSM1 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.9□□□□□ -1.95
PCGF1Q9BSM1 AC093536.2-201ENST00000565257 1406 ntBASIC2.9□□□□□ -1.95
PCGF1Q9BSM1 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
PCGF1Q9BSM1 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.9□□□□□ -1.95
PCGF1Q9BSM1 AC068647.1-201ENST00000489539 2265 ntBASIC2.89□□□□□ -1.95
PCGF1Q9BSM1 RNU1-75P-201ENST00000347264 129 ntBASIC2.89□□□□□ -1.95
PCGF1Q9BSM1 MIR208A-201ENST00000362287 71 ntBASIC2.89□□□□□ -1.95
PCGF1Q9BSM1 RNU6-522P-201ENST00000364497 107 ntBASIC2.89□□□□□ -1.95
PCGF1Q9BSM1 Y_RNA.333-201ENST00000365274 102 ntBASIC2.89□□□□□ -1.95
PCGF1Q9BSM1 SNORA70.4-201ENST00000365509 134 ntBASIC2.89□□□□□ -1.95
PCGF1Q9BSM1 MIR490-201ENST00000384865 128 ntBASIC2.89□□□□□ -1.95
PCGF1Q9BSM1 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.89□□□□□ -1.95
PCGF1Q9BSM1 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 160.2 ms