Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.39□□□□□ -1.87
PAAF1Q9BRP4 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.39□□□□□ -1.87
PAAF1Q9BRP4 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.39□□□□□ -1.87
PAAF1Q9BRP4 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.39□□□□□ -1.87
PAAF1Q9BRP4 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PAAF1Q9BRP4 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PAAF1Q9BRP4 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
PAAF1Q9BRP4 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.38□□□□□ -1.87
PAAF1Q9BRP4 Y_RNA.100-201ENST00000363141 102 ntBASIC3.38□□□□□ -1.87
PAAF1Q9BRP4 Y_RNA.111-201ENST00000363248 100 ntBASIC3.38□□□□□ -1.87
PAAF1Q9BRP4 RNU6-767P-201ENST00000384132 107 ntBASIC3.38□□□□□ -1.87
PAAF1Q9BRP4 SNORA16.2-201ENST00000390991 127 ntBASIC3.38□□□□□ -1.87
PAAF1Q9BRP4 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PAAF1Q9BRP4 AP000567.1-201ENST00000406413 156 ntBASIC3.38□□□□□ -1.87
PAAF1Q9BRP4 RPL5P18-201ENST00000406671 891 ntBASIC3.38□□□□□ -1.87
PAAF1Q9BRP4 BX682237.1-201ENST00000415016 335 ntBASIC3.38□□□□□ -1.87
PAAF1Q9BRP4 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.38□□□□□ -1.87
PAAF1Q9BRP4 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.38□□□□□ -1.87
PAAF1Q9BRP4 SNORA59A-201ENST00000459326 152 ntBASIC3.38□□□□□ -1.87
PAAF1Q9BRP4 RNU6-1208P-201ENST00000459588 107 ntBASIC3.38□□□□□ -1.87
PAAF1Q9BRP4 AL135752.1-201ENST00000479477 471 ntBASIC3.38□□□□□ -1.87
PAAF1Q9BRP4 AC083904.1-201ENST00000487828 231 ntBASIC3.38□□□□□ -1.87
PAAF1Q9BRP4 HIGD1AP13-201ENST00000509878 289 ntBASIC3.38□□□□□ -1.87
PAAF1Q9BRP4 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.38□□□□□ -1.87
PAAF1Q9BRP4 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.38□□□□□ -1.87
PAAF1Q9BRP4 RNU6-189P-201ENST00000516120 101 ntBASIC3.38□□□□□ -1.87
PAAF1Q9BRP4 AP003122.3-201ENST00000526316 255 ntBASIC3.38□□□□□ -1.87
PAAF1Q9BRP4 AC084851.1-201ENST00000529105 249 ntBASIC3.38□□□□□ -1.87
PAAF1Q9BRP4 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.38□□□□□ -1.87
PAAF1Q9BRP4 AL118558.2-201ENST00000556294 238 ntBASIC3.38□□□□□ -1.87
PAAF1Q9BRP4 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.38□□□□□ -1.87
PAAF1Q9BRP4 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.38□□□□□ -1.87
PAAF1Q9BRP4 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.38□□□□□ -1.87
PAAF1Q9BRP4 AC012119.1-201ENST00000603184 222 ntBASIC3.38□□□□□ -1.87
PAAF1Q9BRP4 MIR6076-201ENST00000617521 113 ntBASIC3.38□□□□□ -1.87
PAAF1Q9BRP4 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.38□□□□□ -1.87
PAAF1Q9BRP4 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
PAAF1Q9BRP4 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
PAAF1Q9BRP4 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.37□□□□□ -1.87
PAAF1Q9BRP4 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.37□□□□□ -1.87
PAAF1Q9BRP4 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
PAAF1Q9BRP4 AL359693.1-201ENST00000614959 2407 ntBASIC3.37□□□□□ -1.87
PAAF1Q9BRP4 FTLP6-201ENST00000355274 422 ntBASIC3.37□□□□□ -1.87
PAAF1Q9BRP4 RNU6-371P-201ENST00000364283 108 ntBASIC3.37□□□□□ -1.87
PAAF1Q9BRP4 AP002088.1-201ENST00000382740 395 ntBASIC3.37□□□□□ -1.87
PAAF1Q9BRP4 MIR578-201ENST00000384828 96 ntBASIC3.37□□□□□ -1.87
PAAF1Q9BRP4 MIR634-201ENST00000385208 97 ntBASIC3.37□□□□□ -1.87
PAAF1Q9BRP4 SNORD67-201ENST00000390833 111 ntBASIC3.37□□□□□ -1.87
PAAF1Q9BRP4 AL138885.1-201ENST00000405921 675 ntBASIC3.37□□□□□ -1.87
PAAF1Q9BRP4 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.37□□□□□ -1.87
PAAF1Q9BRP4 NEK4P1-201ENST00000433383 879 ntBASIC3.37□□□□□ -1.87
PAAF1Q9BRP4 RPL12P25-201ENST00000455592 494 ntBASIC3.37□□□□□ -1.87
PAAF1Q9BRP4 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.37□□□□□ -1.87
PAAF1Q9BRP4 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.37□□□□□ -1.87
PAAF1Q9BRP4 MTCO2P30-201ENST00000503662 364 ntBASIC3.37□□□□□ -1.87
PAAF1Q9BRP4 AC009901.1-201ENST00000506703 541 ntBASIC3.37□□□□□ -1.87
PAAF1Q9BRP4 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.37□□□□□ -1.87
PAAF1Q9BRP4 AC046134.1-201ENST00000514454 666 ntBASIC3.37□□□□□ -1.87
PAAF1Q9BRP4 RNU2-69P-201ENST00000516061 100 ntBASIC3.37□□□□□ -1.87
PAAF1Q9BRP4 Y_RNA.665-201ENST00000516177 98 ntBASIC3.37□□□□□ -1.87
PAAF1Q9BRP4 AC009812.2-201ENST00000517657 457 ntBASIC3.37□□□□□ -1.87
PAAF1Q9BRP4 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.37□□□□□ -1.87
PAAF1Q9BRP4 NDUFB9P3-201ENST00000521269 501 ntBASIC3.37□□□□□ -1.87
PAAF1Q9BRP4 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.37□□□□□ -1.87
PAAF1Q9BRP4 AC022080.3-201ENST00000544433 482 ntBASIC3.37□□□□□ -1.87
PAAF1Q9BRP4 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.37□□□□□ -1.87
PAAF1Q9BRP4 VN1R80P-201ENST00000597126 338 ntBASIC3.37□□□□□ -1.87
PAAF1Q9BRP4 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.37□□□□□ -1.87
PAAF1Q9BRP4 AC012531.5-201ENST00000611375 151 ntBASIC3.37□□□□□ -1.87
PAAF1Q9BRP4 DUSP12P1-201ENST00000612874 516 ntBASIC3.37□□□□□ -1.87
PAAF1Q9BRP4 AL136221.1-201ENST00000621449 509 ntBASIC3.37□□□□□ -1.87
PAAF1Q9BRP4 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PAAF1Q9BRP4 HSPA8P1-201ENST00000425843 1833 ntBASIC3.37□□□□□ -1.87
PAAF1Q9BRP4 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
PAAF1Q9BRP4 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
PAAF1Q9BRP4 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PAAF1Q9BRP4 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PAAF1Q9BRP4 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PAAF1Q9BRP4 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PAAF1Q9BRP4 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PAAF1Q9BRP4 RNU6-510P-201ENST00000391239 108 ntBASIC3.36□□□□□ -1.87
PAAF1Q9BRP4 AC007560.1-201ENST00000426912 237 ntBASIC3.36□□□□□ -1.87
PAAF1Q9BRP4 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.36□□□□□ -1.87
PAAF1Q9BRP4 AL669831.1-202ENST00000428504 417 ntBASIC3.36□□□□□ -1.87
PAAF1Q9BRP4 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.36□□□□□ -1.87
PAAF1Q9BRP4 GTF2IP13-201ENST00000438487 386 ntBASIC3.36□□□□□ -1.87
PAAF1Q9BRP4 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.36□□□□□ -1.87
PAAF1Q9BRP4 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.36□□□□□ -1.87
PAAF1Q9BRP4 AL590664.1-201ENST00000448065 339 ntBASIC3.36□□□□□ -1.87
PAAF1Q9BRP4 SSXP4-201ENST00000451349 245 ntBASIC3.36□□□□□ -1.87
PAAF1Q9BRP4 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.36□□□□□ -1.87
PAAF1Q9BRP4 CEACAMP4-201ENST00000457676 421 ntBASIC3.36□□□□□ -1.87
PAAF1Q9BRP4 RNU7-167P-201ENST00000459160 62 ntBASIC3.36□□□□□ -1.87
PAAF1Q9BRP4 DYNLL1P5-201ENST00000467158 270 ntBASIC3.36□□□□□ -1.87
PAAF1Q9BRP4 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.36□□□□□ -1.87
PAAF1Q9BRP4 HMGB1P30-201ENST00000492455 606 ntBASIC3.36□□□□□ -1.87
PAAF1Q9BRP4 AC139453.3-201ENST00000493276 369 ntBASIC3.36□□□□□ -1.87
PAAF1Q9BRP4 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.36□□□□□ -1.87
PAAF1Q9BRP4 AC008716.1-201ENST00000511084 513 ntBASIC3.36□□□□□ -1.87
PAAF1Q9BRP4 AC112206.3-201ENST00000514578 389 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms