Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC090582.1-201ENST00000636321 199 ntBASIC2.5□□□□□ -2.01
SSX3Q99909 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
SSX3Q99909 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
SSX3Q99909 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SSX3Q99909 RNU6-61P-201ENST00000365528 109 ntBASIC2.49□□□□□ -2.01
SSX3Q99909 RNU6-108P-201ENST00000365558 107 ntBASIC2.49□□□□□ -2.01
SSX3Q99909 RNU1-138P-201ENST00000384093 164 ntBASIC2.49□□□□□ -2.01
SSX3Q99909 RNU6-348P-201ENST00000384386 107 ntBASIC2.49□□□□□ -2.01
SSX3Q99909 SNORD67-201ENST00000390833 111 ntBASIC2.49□□□□□ -2.01
SSX3Q99909 RNA5SP274-201ENST00000410484 108 ntBASIC2.49□□□□□ -2.01
SSX3Q99909 RNA5SP111-201ENST00000411386 101 ntBASIC2.49□□□□□ -2.01
SSX3Q99909 MTCO2P34-201ENST00000421994 607 ntBASIC2.49□□□□□ -2.01
SSX3Q99909 AL160275.3-201ENST00000423876 471 ntBASIC2.49□□□□□ -2.01
SSX3Q99909 RPL35AP12-201ENST00000425362 338 ntBASIC2.49□□□□□ -2.01
SSX3Q99909 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.49□□□□□ -2.01
SSX3Q99909 AC133104.1-201ENST00000429100 218 ntBASIC2.49□□□□□ -2.01
SSX3Q99909 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.49□□□□□ -2.01
SSX3Q99909 AL161651.1-201ENST00000440882 223 ntBASIC2.49□□□□□ -2.01
SSX3Q99909 MTCO1P19-201ENST00000443487 500 ntBASIC2.49□□□□□ -2.01
SSX3Q99909 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.49□□□□□ -2.01
SSX3Q99909 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.49□□□□□ -2.01
SSX3Q99909 AC133134.1-201ENST00000466800 359 ntBASIC2.49□□□□□ -2.01
SSX3Q99909 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.49□□□□□ -2.01
SSX3Q99909 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.49□□□□□ -2.01
SSX3Q99909 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.49□□□□□ -2.01
SSX3Q99909 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.49□□□□□ -2.01
SSX3Q99909 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
SSX3Q99909 AC109329.2-201ENST00000519658 482 ntBASIC2.49□□□□□ -2.01
SSX3Q99909 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.49□□□□□ -2.01
SSX3Q99909 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.49□□□□□ -2.01
SSX3Q99909 AP003072.2-201ENST00000527756 676 ntBASIC2.49□□□□□ -2.01
SSX3Q99909 AL121821.2-201ENST00000556081 394 ntBASIC2.49□□□□□ -2.01
SSX3Q99909 AC006362.1-201ENST00000567392 174 ntBASIC2.49□□□□□ -2.01
SSX3Q99909 MIR4528-201ENST00000577763 90 ntBASIC2.49□□□□□ -2.01
SSX3Q99909 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
SSX3Q99909 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.49□□□□□ -2.01
SSX3Q99909 AC068790.2-201ENST00000602601 557 ntBASIC2.49□□□□□ -2.01
SSX3Q99909 AC008121.1-201ENST00000603244 268 ntBASIC2.49□□□□□ -2.01
SSX3Q99909 AL021997.1-201ENST00000605757 193 ntBASIC2.49□□□□□ -2.01
SSX3Q99909 RN7SKP299-201ENST00000606679 301 ntBASIC2.49□□□□□ -2.01
SSX3Q99909 AC098614.4-201ENST00000607601 462 ntBASIC2.49□□□□□ -2.01
SSX3Q99909 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.49□□□□□ -2.01
SSX3Q99909 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.49□□□□□ -2.01
SSX3Q99909 AL390237.1-201ENST00000404226 1415 ntBASIC2.49□□□□□ -2.01
SSX3Q99909 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SSX3Q99909 ASNSP3-201ENST00000451989 1306 ntBASIC2.48□□□□□ -2.01
SSX3Q99909 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SSX3Q99909 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SSX3Q99909 MIR22-201ENST00000362190 85 ntBASIC2.48□□□□□ -2.01
SSX3Q99909 RNU6-1097P-201ENST00000363586 107 ntBASIC2.48□□□□□ -2.01
SSX3Q99909 SNORA38-201ENST00000363946 132 ntBASIC2.48□□□□□ -2.01
SSX3Q99909 SNORA75-201ENST00000384158 137 ntBASIC2.48□□□□□ -2.01
SSX3Q99909 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
SSX3Q99909 UBA52P6-201ENST00000399822 382 ntBASIC2.48□□□□□ -2.01
SSX3Q99909 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.48□□□□□ -2.01
SSX3Q99909 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.48□□□□□ -2.01
SSX3Q99909 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.48□□□□□ -2.01
SSX3Q99909 AL078601.1-201ENST00000444542 271 ntBASIC2.48□□□□□ -2.01
SSX3Q99909 MTATP6P26-201ENST00000445926 662 ntBASIC2.48□□□□□ -2.01
SSX3Q99909 Z83846.1-201ENST00000446798 265 ntBASIC2.48□□□□□ -2.01
SSX3Q99909 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.48□□□□□ -2.01
SSX3Q99909 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.48□□□□□ -2.01
SSX3Q99909 AC003071.1-201ENST00000451219 789 ntBASIC2.48□□□□□ -2.01
SSX3Q99909 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.48□□□□□ -2.01
SSX3Q99909 RBBP4P6-201ENST00000508098 202 ntBASIC2.48□□□□□ -2.01
SSX3Q99909 RNA5SP367-201ENST00000516557 118 ntBASIC2.48□□□□□ -2.01
SSX3Q99909 SNORD19.2-201ENST00000516978 73 ntBASIC2.48□□□□□ -2.01
SSX3Q99909 RNU6-430P-201ENST00000517078 107 ntBASIC2.48□□□□□ -2.01
SSX3Q99909 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.48□□□□□ -2.01
SSX3Q99909 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.48□□□□□ -2.01
SSX3Q99909 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.48□□□□□ -2.01
SSX3Q99909 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.48□□□□□ -2.01
SSX3Q99909 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.48□□□□□ -2.01
SSX3Q99909 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.48□□□□□ -2.01
SSX3Q99909 PIGPP4-201ENST00000584447 307 ntBASIC2.48□□□□□ -2.01
SSX3Q99909 RSL24D1P11-201ENST00000591045 491 ntBASIC2.48□□□□□ -2.01
SSX3Q99909 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.48□□□□□ -2.01
SSX3Q99909 Z84480.1-201ENST00000605131 311 ntBASIC2.48□□□□□ -2.01
SSX3Q99909 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.48□□□□□ -2.01
SSX3Q99909 AC093648.1-201ENST00000623546 606 ntBASIC2.48□□□□□ -2.01
SSX3Q99909 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SSX3Q99909 AC000403.1-201ENST00000613696 3585 ntBASIC2.48□□□□□ -2.01
SSX3Q99909 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SSX3Q99909 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.47□□□□□ -2.01
SSX3Q99909 CKAP2P1-201ENST00000555477 2049 ntBASIC2.47□□□□□ -2.01
SSX3Q99909 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
SSX3Q99909 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SSX3Q99909 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SSX3Q99909 AC004944.1-201ENST00000517807 3059 ntBASIC2.47□□□□□ -2.01
SSX3Q99909 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.47□□□□□ -2.01
SSX3Q99909 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.47□□□□□ -2.01
SSX3Q99909 RNU6-181P-201ENST00000363225 107 ntBASIC2.47□□□□□ -2.01
SSX3Q99909 Y_RNA.367-201ENST00000365544 101 ntBASIC2.47□□□□□ -2.01
SSX3Q99909 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.47□□□□□ -2.01
SSX3Q99909 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SSX3Q99909 SNORA40C-201ENST00000391285 128 ntBASIC2.47□□□□□ -2.01
SSX3Q99909 RNU6-387P-201ENST00000411331 105 ntBASIC2.47□□□□□ -2.01
SSX3Q99909 OR51A5P-201ENST00000415429 942 ntBASIC2.47□□□□□ -2.01
SSX3Q99909 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.47□□□□□ -2.01
SSX3Q99909 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms