Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 MIR670-201ENST00000390142 98 ntBASIC3.45□□□□□ -1.86
TIMP4Q99727 Z98941.1-201ENST00000407764 100 ntBASIC3.45□□□□□ -1.86
TIMP4Q99727 RNU6-293P-201ENST00000411259 106 ntBASIC3.45□□□□□ -1.86
TIMP4Q99727 HMGB3P2-201ENST00000411913 584 ntBASIC3.45□□□□□ -1.86
TIMP4Q99727 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TIMP4Q99727 USMG5P1-201ENST00000425964 177 ntBASIC3.45□□□□□ -1.86
TIMP4Q99727 AL451062.2-201ENST00000427515 271 ntBASIC3.45□□□□□ -1.86
TIMP4Q99727 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.45□□□□□ -1.86
TIMP4Q99727 HMGB1P9-201ENST00000429856 646 ntBASIC3.45□□□□□ -1.86
TIMP4Q99727 AC108059.2-201ENST00000434626 151 ntBASIC3.45□□□□□ -1.86
TIMP4Q99727 AC008264.1-201ENST00000447612 367 ntBASIC3.45□□□□□ -1.86
TIMP4Q99727 SNORD5.1-201ENST00000458800 75 ntBASIC3.45□□□□□ -1.86
TIMP4Q99727 RNU7-187P-201ENST00000458985 68 ntBASIC3.45□□□□□ -1.86
TIMP4Q99727 VN1R104P-201ENST00000505115 1009 ntBASIC3.45□□□□□ -1.86
TIMP4Q99727 RNA5SP164-201ENST00000516533 110 ntBASIC3.45□□□□□ -1.86
TIMP4Q99727 SNORD116.3-201ENST00000517176 78 ntBASIC3.45□□□□□ -1.86
TIMP4Q99727 AC023442.1-201ENST00000531247 422 ntBASIC3.45□□□□□ -1.86
TIMP4Q99727 SNRPGP16-201ENST00000533275 226 ntBASIC3.45□□□□□ -1.86
TIMP4Q99727 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.45□□□□□ -1.86
TIMP4Q99727 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.45□□□□□ -1.86
TIMP4Q99727 AC004817.2-201ENST00000561794 651 ntBASIC3.45□□□□□ -1.86
TIMP4Q99727 VN1R107P-201ENST00000601784 209 ntBASIC3.45□□□□□ -1.86
TIMP4Q99727 ELOCP5-201ENST00000604924 333 ntBASIC3.45□□□□□ -1.86
TIMP4Q99727 RNU6-85P-201ENST00000605989 107 ntBASIC3.45□□□□□ -1.86
TIMP4Q99727 AL353748.2-201ENST00000622148 471 ntBASIC3.45□□□□□ -1.86
TIMP4Q99727 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.45□□□□□ -1.86
TIMP4Q99727 AC112200.1-201ENST00000625015 234 ntBASIC3.45□□□□□ -1.86
TIMP4Q99727 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TIMP4Q99727 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
TIMP4Q99727 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.45□□□□□ -1.86
TIMP4Q99727 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.45□□□□□ -1.86
TIMP4Q99727 AL161912.2-201ENST00000565707 3007 ntBASIC3.45□□□□□ -1.86
TIMP4Q99727 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TIMP4Q99727 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.45□□□□□ -1.86
TIMP4Q99727 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TIMP4Q99727 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.44□□□□□ -1.86
TIMP4Q99727 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TIMP4Q99727 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
TIMP4Q99727 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
TIMP4Q99727 Y_RNA.80-201ENST00000362996 102 ntBASIC3.44□□□□□ -1.86
TIMP4Q99727 Y_RNA.193-201ENST00000363979 102 ntBASIC3.44□□□□□ -1.86
TIMP4Q99727 Y_RNA.485-201ENST00000384395 102 ntBASIC3.44□□□□□ -1.86
TIMP4Q99727 MIR578-201ENST00000384828 96 ntBASIC3.44□□□□□ -1.86
TIMP4Q99727 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
TIMP4Q99727 MIR1302-3-201ENST00000408128 138 ntBASIC3.44□□□□□ -1.86
TIMP4Q99727 RHEBP3-201ENST00000411920 351 ntBASIC3.44□□□□□ -1.86
TIMP4Q99727 AC063979.1-201ENST00000415539 377 ntBASIC3.44□□□□□ -1.86
TIMP4Q99727 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.44□□□□□ -1.86
TIMP4Q99727 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.44□□□□□ -1.86
TIMP4Q99727 MTATP6P4-201ENST00000427725 675 ntBASIC3.44□□□□□ -1.86
TIMP4Q99727 AC073063.1-201ENST00000434352 607 ntBASIC3.44□□□□□ -1.86
TIMP4Q99727 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.44□□□□□ -1.86
TIMP4Q99727 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.44□□□□□ -1.86
TIMP4Q99727 RNU7-138P-201ENST00000459479 64 ntBASIC3.44□□□□□ -1.86
TIMP4Q99727 AL133162.1-201ENST00000463228 453 ntBASIC3.44□□□□□ -1.86
TIMP4Q99727 AC018437.1-201ENST00000492214 406 ntBASIC3.44□□□□□ -1.86
TIMP4Q99727 HMGB1P30-201ENST00000492455 606 ntBASIC3.44□□□□□ -1.86
TIMP4Q99727 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.44□□□□□ -1.86
TIMP4Q99727 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.44□□□□□ -1.86
TIMP4Q99727 RNU6-264P-201ENST00000517134 104 ntBASIC3.44□□□□□ -1.86
TIMP4Q99727 RNU4-60P-201ENST00000517239 135 ntBASIC3.44□□□□□ -1.86
TIMP4Q99727 IGKV2D-23-201ENST00000518179 286 ntBASIC3.44□□□□□ -1.86
TIMP4Q99727 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
TIMP4Q99727 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.44□□□□□ -1.86
TIMP4Q99727 MIR3668-201ENST00000582138 75 ntBASIC3.44□□□□□ -1.86
TIMP4Q99727 MIR5187-201ENST00000583479 76 ntBASIC3.44□□□□□ -1.86
TIMP4Q99727 BDH2P1-201ENST00000602288 736 ntBASIC3.44□□□□□ -1.86
TIMP4Q99727 AC092447.9-201ENST00000603395 144 ntBASIC3.44□□□□□ -1.86
TIMP4Q99727 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.44□□□□□ -1.86
TIMP4Q99727 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.44□□□□□ -1.86
TIMP4Q99727 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.44□□□□□ -1.86
TIMP4Q99727 AL031601.2-202ENST00000622650 282 ntBASIC3.44□□□□□ -1.86
TIMP4Q99727 Z69720.2-201ENST00000624755 279 ntBASIC3.44□□□□□ -1.86
TIMP4Q99727 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TIMP4Q99727 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TIMP4Q99727 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TIMP4Q99727 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.44□□□□□ -1.86
TIMP4Q99727 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TIMP4Q99727 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.43□□□□□ -1.86
TIMP4Q99727 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
TIMP4Q99727 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.43□□□□□ -1.86
TIMP4Q99727 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
TIMP4Q99727 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TIMP4Q99727 Y_RNA.176-201ENST00000363815 109 ntBASIC3.43□□□□□ -1.86
TIMP4Q99727 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TIMP4Q99727 Y_RNA.389-201ENST00000383924 113 ntBASIC3.43□□□□□ -1.86
TIMP4Q99727 SNORA36C-201ENST00000384289 132 ntBASIC3.43□□□□□ -1.86
TIMP4Q99727 Y_RNA.480-201ENST00000384364 102 ntBASIC3.43□□□□□ -1.86
TIMP4Q99727 MIR517A-201ENST00000385001 87 ntBASIC3.43□□□□□ -1.86
TIMP4Q99727 SNORD73A-201ENST00000386062 65 ntBASIC3.43□□□□□ -1.86
TIMP4Q99727 RNA5SP171-201ENST00000391071 115 ntBASIC3.43□□□□□ -1.86
TIMP4Q99727 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.43□□□□□ -1.86
TIMP4Q99727 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.43□□□□□ -1.86
TIMP4Q99727 DPH3P2-201ENST00000422618 250 ntBASIC3.43□□□□□ -1.86
TIMP4Q99727 AL139247.1-201ENST00000422768 325 ntBASIC3.43□□□□□ -1.86
TIMP4Q99727 AC002075.2-201ENST00000425207 252 ntBASIC3.43□□□□□ -1.86
TIMP4Q99727 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.43□□□□□ -1.86
TIMP4Q99727 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.43□□□□□ -1.86
TIMP4Q99727 FTH1P25-201ENST00000447665 469 ntBASIC3.43□□□□□ -1.86
TIMP4Q99727 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms