Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.28□□□□□ -2.36
COL12A1Q99715 AC025465.4-201ENST00000513422 638 ntBASIC0.28□□□□□ -2.36
COL12A1Q99715 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.28□□□□□ -2.36
COL12A1Q99715 AL590705.4-201ENST00000532209 134 ntBASIC0.28□□□□□ -2.36
COL12A1Q99715 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC0.28□□□□□ -2.36
COL12A1Q99715 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
COL12A1Q99715 SNORD114-31-201ENST00000363219 75 ntBASIC0.28□□□□□ -2.36
COL12A1Q99715 RNU1-105P-201ENST00000363470 161 ntBASIC0.28□□□□□ -2.36
COL12A1Q99715 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
COL12A1Q99715 Y_RNA.568-201ENST00000384742 113 ntBASIC0.28□□□□□ -2.36
COL12A1Q99715 AL031577.2-201ENST00000404133 280 ntBASIC0.28□□□□□ -2.36
COL12A1Q99715 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.28□□□□□ -2.36
COL12A1Q99715 HSPE1P21-201ENST00000438283 308 ntBASIC0.28□□□□□ -2.36
COL12A1Q99715 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC0.28□□□□□ -2.36
COL12A1Q99715 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.28□□□□□ -2.36
COL12A1Q99715 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
COL12A1Q99715 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC0.28□□□□□ -2.36
COL12A1Q99715 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.28□□□□□ -2.36
COL12A1Q99715 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.28□□□□□ -2.36
COL12A1Q99715 MIR4299-201ENST00000577899 72 ntBASIC0.28□□□□□ -2.36
COL12A1Q99715 AC067838.1-201ENST00000606064 577 ntBASIC0.28□□□□□ -2.36
COL12A1Q99715 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.28□□□□□ -2.37
COL12A1Q99715 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.37
COL12A1Q99715 MIR767-201ENST00000390228 109 ntBASIC0.27□□□□□ -2.37
COL12A1Q99715 AL606490.4-201ENST00000423117 127 ntBASIC0.27□□□□□ -2.37
COL12A1Q99715 AC134050.1-201ENST00000495088 933 ntBASIC0.27□□□□□ -2.37
COL12A1Q99715 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
COL12A1Q99715 RNU6-889P-201ENST00000517189 103 ntBASIC0.27□□□□□ -2.37
COL12A1Q99715 MIR548AX-201ENST00000580117 73 ntBASIC0.27□□□□□ -2.37
COL12A1Q99715 VN1R82P-201ENST00000601481 356 ntBASIC0.27□□□□□ -2.37
COL12A1Q99715 AL355816.1-201ENST00000607951 118 ntBASIC0.27□□□□□ -2.37
COL12A1Q99715 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC0.27□□□□□ -2.37
COL12A1Q99715 AL121890.5-201ENST00000620848 304 ntBASIC0.27□□□□□ -2.37
COL12A1Q99715 FAM157B-203ENST00000639350 358 ntBASIC0.27□□□□□ -2.37
COL12A1Q99715 SNORD49B-201ENST00000365172 72 ntBASIC0.27□□□□□ -2.37
COL12A1Q99715 BTF3L4P2-201ENST00000392798 346 ntBASIC0.27□□□□□ -2.37
COL12A1Q99715 MORN2-203ENST00000409131 544 ntTSL 5 BASIC0.27□□□□□ -2.37
COL12A1Q99715 OFD1P18Y-201ENST00000420889 959 ntBASIC0.27□□□□□ -2.37
COL12A1Q99715 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.27□□□□□ -2.37
COL12A1Q99715 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.27□□□□□ -2.37
COL12A1Q99715 RPL30P11-201ENST00000495304 339 ntBASIC0.27□□□□□ -2.37
COL12A1Q99715 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC0.27□□□□□ -2.37
COL12A1Q99715 RNU7-193P-201ENST00000516723 65 ntBASIC0.27□□□□□ -2.37
COL12A1Q99715 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
COL12A1Q99715 AC118273.2-201ENST00000532092 465 ntBASIC0.27□□□□□ -2.37
COL12A1Q99715 AC026371.1-201ENST00000551867 419 ntBASIC0.27□□□□□ -2.37
COL12A1Q99715 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC0.27□□□□□ -2.37
COL12A1Q99715 AL669831.4-202ENST00000590817 238 ntBASIC0.27□□□□□ -2.37
COL12A1Q99715 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC0.27□□□□□ -2.37
COL12A1Q99715 MTND5P8-201ENST00000449817 1083 ntBASIC0.27□□□□□ -2.37
COL12A1Q99715 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC0.27□□□□□ -2.37
COL12A1Q99715 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.27□□□□□ -2.37
COL12A1Q99715 RPL22P13-201ENST00000493291 347 ntBASIC0.27□□□□□ -2.37
COL12A1Q99715 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.27□□□□□ -2.37
COL12A1Q99715 AL356585.4-201ENST00000623078 1229 ntBASIC0.27□□□□□ -2.37
COL12A1Q99715 AC020923.1-201ENST00000624021 917 ntBASIC0.27□□□□□ -2.37
COL12A1Q99715 RNA5SP361-201ENST00000362686 118 ntBASIC0.26□□□□□ -2.37
COL12A1Q99715 RNA5SP105-201ENST00000391123 113 ntBASIC0.26□□□□□ -2.37
COL12A1Q99715 RPL37P10-201ENST00000412884 288 ntBASIC0.26□□□□□ -2.37
COL12A1Q99715 RSU1P2-202ENST00000437884 485 ntBASIC0.26□□□□□ -2.37
COL12A1Q99715 AC241584.1-201ENST00000438469 1241 ntBASIC0.26□□□□□ -2.37
COL12A1Q99715 AL513343.1-201ENST00000451818 792 ntBASIC0.26□□□□□ -2.37
COL12A1Q99715 RNU7-157P-201ENST00000459600 66 ntBASIC0.26□□□□□ -2.37
COL12A1Q99715 AC087879.1-201ENST00000474343 374 ntBASIC0.26□□□□□ -2.37
COL12A1Q99715 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC0.26□□□□□ -2.37
COL12A1Q99715 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC0.26□□□□□ -2.37
COL12A1Q99715 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC0.26□□□□□ -2.37
COL12A1Q99715 AC040174.2-201ENST00000602701 465 ntBASIC0.26□□□□□ -2.37
COL12A1Q99715 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
COL12A1Q99715 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.26□□□□□ -2.37
COL12A1Q99715 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.26□□□□□ -2.37
COL12A1Q99715 SNORA31.13-201ENST00000516624 135 ntBASIC0.26□□□□□ -2.37
COL12A1Q99715 SNORA76.2-201ENST00000517095 137 ntBASIC0.26□□□□□ -2.37
COL12A1Q99715 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC0.26□□□□□ -2.37
COL12A1Q99715 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.26□□□□□ -2.37
COL12A1Q99715 AC141557.1-201ENST00000540982 400 ntBASIC0.26□□□□□ -2.37
COL12A1Q99715 HMGB1P14-201ENST00000557424 591 ntBASIC0.26□□□□□ -2.37
COL12A1Q99715 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
COL12A1Q99715 SNORD115-41-201ENST00000363608 82 ntBASIC0.25□□□□□ -2.37
COL12A1Q99715 MIR214-201ENST00000385214 110 ntBASIC0.25□□□□□ -2.37
COL12A1Q99715 MIR100-201ENST00000385259 80 ntBASIC0.25□□□□□ -2.37
COL12A1Q99715 AC097463.2-201ENST00000421074 142 ntBASIC0.25□□□□□ -2.37
COL12A1Q99715 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC0.25□□□□□ -2.37
COL12A1Q99715 CR769776.1-201ENST00000441254 787 ntBASIC0.25□□□□□ -2.37
COL12A1Q99715 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC0.25□□□□□ -2.37
COL12A1Q99715 AC005668.1-201ENST00000571142 476 ntBASIC0.25□□□□□ -2.37
COL12A1Q99715 MTND2P13-201ENST00000577438 1039 ntBASIC0.25□□□□□ -2.37
COL12A1Q99715 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC0.25□□□□□ -2.37
COL12A1Q99715 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC0.25□□□□□ -2.37
COL12A1Q99715 AC090116.1-201ENST00000615679 446 ntBASIC0.25□□□□□ -2.37
COL12A1Q99715 AC012676.2-201ENST00000619258 186 ntBASIC0.25□□□□□ -2.37
COL12A1Q99715 RNU6-833P-201ENST00000363486 107 ntBASIC0.25□□□□□ -2.37
COL12A1Q99715 MIR10B-201ENST00000385011 110 ntBASIC0.25□□□□□ -2.37
COL12A1Q99715 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC0.25□□□□□ -2.37
COL12A1Q99715 SEPT2P1-201ENST00000419651 180 ntBASIC0.25□□□□□ -2.37
COL12A1Q99715 NDUFB4P7-201ENST00000423198 363 ntBASIC0.25□□□□□ -2.37
COL12A1Q99715 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC0.25□□□□□ -2.37
COL12A1Q99715 ANKRD26P4-201ENST00000455755 950 ntBASIC0.25□□□□□ -2.37
COL12A1Q99715 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.25□□□□□ -2.37
COL12A1Q99715 AC074198.2-201ENST00000508153 258 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms