Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 AC103987.3-201ENST00000582071 292 ntBASIC1.4□□□□□ -2.19
CCDC42Q96M95 AC069304.2-201ENST00000605154 435 ntBASIC1.4□□□□□ -2.19
CCDC42Q96M95 MIR8084-201ENST00000614105 89 ntBASIC1.4□□□□□ -2.19
CCDC42Q96M95 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.4□□□□□ -2.19
CCDC42Q96M95 MIR7843-201ENST00000622274 79 ntBASIC1.4□□□□□ -2.19
CCDC42Q96M95 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CCDC42Q96M95 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CCDC42Q96M95 AP000776.1-201ENST00000530032 1663 ntBASIC1.39□□□□□ -2.19
CCDC42Q96M95 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.39□□□□□ -2.19
CCDC42Q96M95 RNU6-338P-201ENST00000383888 105 ntBASIC1.39□□□□□ -2.19
CCDC42Q96M95 RNU6-114P-201ENST00000384704 105 ntBASIC1.39□□□□□ -2.19
CCDC42Q96M95 MIR29C-201ENST00000385231 88 ntBASIC1.39□□□□□ -2.19
CCDC42Q96M95 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
CCDC42Q96M95 SNORD65.1-201ENST00000390889 71 ntBASIC1.39□□□□□ -2.19
CCDC42Q96M95 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.39□□□□□ -2.19
CCDC42Q96M95 AC244035.1-201ENST00000430042 390 ntBASIC1.39□□□□□ -2.19
CCDC42Q96M95 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.39□□□□□ -2.19
CCDC42Q96M95 FCF1P6-201ENST00000456841 595 ntBASIC1.39□□□□□ -2.19
CCDC42Q96M95 AC011005.2-201ENST00000487324 359 ntBASIC1.39□□□□□ -2.19
CCDC42Q96M95 FAM206BP-201ENST00000510179 541 ntBASIC1.39□□□□□ -2.19
CCDC42Q96M95 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.39□□□□□ -2.19
CCDC42Q96M95 SNORA44.1-201ENST00000517031 108 ntBASIC1.39□□□□□ -2.19
CCDC42Q96M95 AC022784.5-201ENST00000522241 437 ntBASIC1.39□□□□□ -2.19
CCDC42Q96M95 IMMP1LP2-201ENST00000552954 492 ntBASIC1.39□□□□□ -2.19
CCDC42Q96M95 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.39□□□□□ -2.19
CCDC42Q96M95 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.39□□□□□ -2.19
CCDC42Q96M95 AC091057.3-201ENST00000602684 733 ntBASIC1.39□□□□□ -2.19
CCDC42Q96M95 AC025811.1-201ENST00000604312 472 ntBASIC1.39□□□□□ -2.19
CCDC42Q96M95 ELOCP5-201ENST00000604924 333 ntBASIC1.39□□□□□ -2.19
CCDC42Q96M95 AC021646.1-201ENST00000605469 484 ntBASIC1.39□□□□□ -2.19
CCDC42Q96M95 PRR13P7-201ENST00000605538 430 ntBASIC1.39□□□□□ -2.19
CCDC42Q96M95 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.39□□□□□ -2.19
CCDC42Q96M95 AC017037.3-201ENST00000625016 472 ntBASIC1.39□□□□□ -2.19
CCDC42Q96M95 RNU5E-1-201ENST00000362477 120 ntBASIC1.38□□□□□ -2.19
CCDC42Q96M95 RNU6-1207P-201ENST00000384343 107 ntBASIC1.38□□□□□ -2.19
CCDC42Q96M95 USP9YP26-201ENST00000421008 661 ntBASIC1.38□□□□□ -2.19
CCDC42Q96M95 UBE2V1P4-201ENST00000425374 344 ntBASIC1.38□□□□□ -2.19
CCDC42Q96M95 GPM6BP2-201ENST00000432046 144 ntBASIC1.38□□□□□ -2.19
CCDC42Q96M95 RPL36AP53-201ENST00000432891 316 ntBASIC1.38□□□□□ -2.19
CCDC42Q96M95 MTND4P6-201ENST00000438297 472 ntBASIC1.38□□□□□ -2.19
CCDC42Q96M95 RPS15AP9-201ENST00000439856 381 ntBASIC1.38□□□□□ -2.19
CCDC42Q96M95 MTCO3P45-201ENST00000443036 613 ntBASIC1.38□□□□□ -2.19
CCDC42Q96M95 GPM6BP1-201ENST00000446387 144 ntBASIC1.38□□□□□ -2.19
CCDC42Q96M95 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.38□□□□□ -2.19
CCDC42Q96M95 AC006512.1-201ENST00000468816 291 ntBASIC1.38□□□□□ -2.19
CCDC42Q96M95 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.38□□□□□ -2.19
CCDC42Q96M95 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.38□□□□□ -2.19
CCDC42Q96M95 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.38□□□□□ -2.19
CCDC42Q96M95 OR5B19P-201ENST00000531766 928 ntBASIC1.38□□□□□ -2.19
CCDC42Q96M95 HIGD1AP17-201ENST00000554576 276 ntBASIC1.38□□□□□ -2.19
CCDC42Q96M95 AC027807.1-201ENST00000559921 996 ntBASIC1.38□□□□□ -2.19
CCDC42Q96M95 AL353997.4-201ENST00000586196 166 ntBASIC1.38□□□□□ -2.19
CCDC42Q96M95 AC098826.3-201ENST00000603823 466 ntBASIC1.38□□□□□ -2.19
CCDC42Q96M95 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CCDC42Q96M95 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CCDC42Q96M95 MTND4P21-201ENST00000453886 1357 ntBASIC1.37□□□□□ -2.19
CCDC42Q96M95 ZNF209P-201ENST00000593450 2304 ntBASIC1.37□□□□□ -2.19
CCDC42Q96M95 RNU6-707P-201ENST00000364647 95 ntBASIC1.37□□□□□ -2.19
CCDC42Q96M95 RNU1-57P-201ENST00000384491 166 ntBASIC1.37□□□□□ -2.19
CCDC42Q96M95 MIR30A-201ENST00000385092 71 ntBASIC1.37□□□□□ -2.19
CCDC42Q96M95 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC1.37□□□□□ -2.19
CCDC42Q96M95 AL139397.2-201ENST00000404529 772 ntBASIC1.37□□□□□ -2.19
CCDC42Q96M95 UBE2FP1-201ENST00000416536 447 ntBASIC1.37□□□□□ -2.19
CCDC42Q96M95 ISCA1P1-201ENST00000426679 387 ntBASIC1.37□□□□□ -2.19
CCDC42Q96M95 AL513124.1-201ENST00000450410 614 ntBASIC1.37□□□□□ -2.19
CCDC42Q96M95 MTND2P30-201ENST00000456663 382 ntBASIC1.37□□□□□ -2.19
CCDC42Q96M95 HMGN2P23-201ENST00000456759 269 ntBASIC1.37□□□□□ -2.19
CCDC42Q96M95 RNA5SP57-201ENST00000459463 123 ntBASIC1.37□□□□□ -2.19
CCDC42Q96M95 AC114801.2-201ENST00000503825 781 ntBASIC1.37□□□□□ -2.19
CCDC42Q96M95 AC117522.2-201ENST00000510049 657 ntBASIC1.37□□□□□ -2.19
CCDC42Q96M95 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.37□□□□□ -2.19
CCDC42Q96M95 RNU6-362P-201ENST00000516736 90 ntBASIC1.37□□□□□ -2.19
CCDC42Q96M95 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.37□□□□□ -2.19
CCDC42Q96M95 NDUFA8P1-201ENST00000605525 367 ntBASIC1.37□□□□□ -2.19
CCDC42Q96M95 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.37□□□□□ -2.19
CCDC42Q96M95 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.37□□□□□ -2.19
CCDC42Q96M95 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.37□□□□□ -2.19
CCDC42Q96M95 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CCDC42Q96M95 AL161781.1-201ENST00000354277 403 ntBASIC1.36□□□□□ -2.19
CCDC42Q96M95 RNU6-432P-201ENST00000384196 109 ntBASIC1.36□□□□□ -2.19
CCDC42Q96M95 AL021407.1-201ENST00000404531 386 ntBASIC1.36□□□□□ -2.19
CCDC42Q96M95 C1DP1-201ENST00000426049 402 ntBASIC1.36□□□□□ -2.19
CCDC42Q96M95 GTF2IP3-201ENST00000433887 494 ntBASIC1.36□□□□□ -2.19
CCDC42Q96M95 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.36□□□□□ -2.19
CCDC42Q96M95 OR6C5P-201ENST00000452388 923 ntBASIC1.36□□□□□ -2.19
CCDC42Q96M95 RNU7-136P-201ENST00000458819 69 ntBASIC1.36□□□□□ -2.19
CCDC42Q96M95 RPL31P58-201ENST00000469001 379 ntBASIC1.36□□□□□ -2.19
CCDC42Q96M95 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
CCDC42Q96M95 RPS15AP36-201ENST00000492022 382 ntBASIC1.36□□□□□ -2.19
CCDC42Q96M95 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.36□□□□□ -2.19
CCDC42Q96M95 ACA59.2-201ENST00000517061 156 ntBASIC1.36□□□□□ -2.19
CCDC42Q96M95 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.36□□□□□ -2.19
CCDC42Q96M95 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC1.36□□□□□ -2.19
CCDC42Q96M95 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
CCDC42Q96M95 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.36□□□□□ -2.19
CCDC42Q96M95 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.36□□□□□ -2.19
CCDC42Q96M95 AC087045.1-201ENST00000605856 382 ntBASIC1.36□□□□□ -2.19
CCDC42Q96M95 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.36□□□□□ -2.19
CCDC42Q96M95 AC099842.1-201ENST00000619919 596 ntBASIC1.36□□□□□ -2.19
CCDC42Q96M95 U1.36-201ENST00000620684 176 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 156.3 ms