Protein–RNA interactions for Protein: Q96JN2

CCDC136, Coiled-coil domain-containing protein 136, humanhuman

Predictions only

Length 1,154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136Q96JN2 ASNSP3-201ENST00000451989 1306 ntBASIC3.82□□□□□ -1.8
CCDC136Q96JN2 RNA5SP72-201ENST00000364442 117 ntBASIC3.82□□□□□ -1.8
CCDC136Q96JN2 RNU6-166P-201ENST00000384371 107 ntBASIC3.82□□□□□ -1.8
CCDC136Q96JN2 RNU6-606P-201ENST00000384721 111 ntBASIC3.82□□□□□ -1.8
CCDC136Q96JN2 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CCDC136Q96JN2 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC136Q96JN2 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC136Q96JN2 AL596276.1-201ENST00000434465 418 ntBASIC3.82□□□□□ -1.8
CCDC136Q96JN2 AL078601.1-201ENST00000444542 271 ntBASIC3.82□□□□□ -1.8
CCDC136Q96JN2 FAM92A1P2-202ENST00000504766 877 ntBASIC3.82□□□□□ -1.8
CCDC136Q96JN2 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC136Q96JN2 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC136Q96JN2 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC136Q96JN2 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.82□□□□□ -1.8
CCDC136Q96JN2 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC136Q96JN2 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC136Q96JN2 NACAP3-201ENST00000552100 481 ntBASIC3.82□□□□□ -1.8
CCDC136Q96JN2 MTATP6P3-201ENST00000581686 676 ntBASIC3.82□□□□□ -1.8
CCDC136Q96JN2 AL645944.1-201ENST00000603857 493 ntBASIC3.82□□□□□ -1.8
CCDC136Q96JN2 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC136Q96JN2 AC068137.4-201ENST00000638485 296 ntBASIC3.82□□□□□ -1.8
CCDC136Q96JN2 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC136Q96JN2 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC136Q96JN2 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CCDC136Q96JN2 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC136Q96JN2 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.82□□□□□ -1.8
CCDC136Q96JN2 RPL9P7-201ENST00000330965 580 ntBASIC3.81□□□□□ -1.8
CCDC136Q96JN2 SNORD21-201ENST00000383953 95 ntBASIC3.81□□□□□ -1.8
CCDC136Q96JN2 RNVU1-14-201ENST00000384770 164 ntBASIC3.81□□□□□ -1.8
CCDC136Q96JN2 MIR627-201ENST00000384979 97 ntBASIC3.81□□□□□ -1.8
CCDC136Q96JN2 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CCDC136Q96JN2 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC136Q96JN2 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC136Q96JN2 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC136Q96JN2 AL360271.2-201ENST00000447710 161 ntBASIC3.81□□□□□ -1.8
CCDC136Q96JN2 HMGN2P10-201ENST00000448085 265 ntBASIC3.81□□□□□ -1.8
CCDC136Q96JN2 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC136Q96JN2 SEM1P1-201ENST00000506694 209 ntBASIC3.81□□□□□ -1.8
CCDC136Q96JN2 AC074250.1-201ENST00000511117 192 ntBASIC3.81□□□□□ -1.8
CCDC136Q96JN2 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC136Q96JN2 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.81□□□□□ -1.8
CCDC136Q96JN2 RPPH1-2P-201ENST00000516688 293 ntBASIC3.81□□□□□ -1.8
CCDC136Q96JN2 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC136Q96JN2 PSMA2P1-201ENST00000526365 646 ntBASIC3.81□□□□□ -1.8
CCDC136Q96JN2 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC136Q96JN2 AC021739.1-201ENST00000559631 174 ntBASIC3.81□□□□□ -1.8
CCDC136Q96JN2 MIR4446-201ENST00000578505 67 ntBASIC3.81□□□□□ -1.8
CCDC136Q96JN2 MIR3944-201ENST00000581277 108 ntBASIC3.81□□□□□ -1.8
CCDC136Q96JN2 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC136Q96JN2 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC136Q96JN2 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC136Q96JN2 AC023043.3-201ENST00000593113 385 ntBASIC3.81□□□□□ -1.8
CCDC136Q96JN2 AC005261.5-201ENST00000596280 355 ntBASIC3.81□□□□□ -1.8
CCDC136Q96JN2 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC136Q96JN2 SRGNP1-201ENST00000603392 451 ntBASIC3.81□□□□□ -1.8
CCDC136Q96JN2 AL137843.1-201ENST00000605078 385 ntBASIC3.81□□□□□ -1.8
CCDC136Q96JN2 AC068792.1-201ENST00000621354 417 ntBASIC3.81□□□□□ -1.8
CCDC136Q96JN2 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC136Q96JN2 MIR3199-2-201ENST00000636243 86 ntBASIC3.81□□□□□ -1.8
CCDC136Q96JN2 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC136Q96JN2 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC136Q96JN2 AC093536.2-201ENST00000565257 1406 ntBASIC3.8□□□□□ -1.8
CCDC136Q96JN2 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CCDC136Q96JN2 RNU6-898P-201ENST00000365627 104 ntBASIC3.8□□□□□ -1.8
CCDC136Q96JN2 RNU6-1179P-201ENST00000384667 107 ntBASIC3.8□□□□□ -1.8
CCDC136Q96JN2 MIR34B-201ENST00000385076 84 ntBASIC3.8□□□□□ -1.8
CCDC136Q96JN2 AL122016.1-201ENST00000403365 367 ntBASIC3.8□□□□□ -1.8
CCDC136Q96JN2 AL590004.2-201ENST00000404787 371 ntBASIC3.8□□□□□ -1.8
CCDC136Q96JN2 SNORD88.1-201ENST00000408684 91 ntBASIC3.8□□□□□ -1.8
CCDC136Q96JN2 BX682237.1-201ENST00000415016 335 ntBASIC3.8□□□□□ -1.8
CCDC136Q96JN2 AL096701.2-201ENST00000416920 238 ntBASIC3.8□□□□□ -1.8
CCDC136Q96JN2 AL513477.1-202ENST00000417061 214 ntBASIC3.8□□□□□ -1.8
CCDC136Q96JN2 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC136Q96JN2 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC136Q96JN2 MTND1P18-201ENST00000448191 573 ntBASIC3.8□□□□□ -1.8
CCDC136Q96JN2 RPS15AP27-201ENST00000449183 343 ntBASIC3.8□□□□□ -1.8
CCDC136Q96JN2 RNU7-63P-201ENST00000459054 62 ntBASIC3.8□□□□□ -1.8
CCDC136Q96JN2 RPS29P2-201ENST00000479278 136 ntBASIC3.8□□□□□ -1.8
CCDC136Q96JN2 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC136Q96JN2 MTCO3P9-201ENST00000506989 781 ntBASIC3.8□□□□□ -1.8
CCDC136Q96JN2 RNU6-581P-201ENST00000516214 105 ntBASIC3.8□□□□□ -1.8
CCDC136Q96JN2 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC136Q96JN2 OR5BN1P-201ENST00000532955 829 ntBASIC3.8□□□□□ -1.8
CCDC136Q96JN2 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.8□□□□□ -1.8
CCDC136Q96JN2 AC006199.1-201ENST00000548728 219 ntBASIC3.8□□□□□ -1.8
CCDC136Q96JN2 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC136Q96JN2 UBL5P2-201ENST00000583788 219 ntBASIC3.8□□□□□ -1.8
CCDC136Q96JN2 AL138889.2-201ENST00000603883 242 ntBASIC3.8□□□□□ -1.8
CCDC136Q96JN2 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC136Q96JN2 AC139792.3-201ENST00000623525 224 ntBASIC3.8□□□□□ -1.8
CCDC136Q96JN2 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC136Q96JN2 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.8□□□□□ -1.8
CCDC136Q96JN2 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CCDC136Q96JN2 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CCDC136Q96JN2 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC136Q96JN2 RNA5SP267-201ENST00000364893 126 ntBASIC3.79□□□□□ -1.8
CCDC136Q96JN2 SNORA7.4-201ENST00000384249 137 ntBASIC3.79□□□□□ -1.8
CCDC136Q96JN2 MIR181A2-201ENST00000384863 110 ntBASIC3.79□□□□□ -1.8
CCDC136Q96JN2 RNU6-1158P-201ENST00000391167 107 ntBASIC3.79□□□□□ -1.8
CCDC136Q96JN2 RNU6-193P-201ENST00000410977 107 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms