Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
VPS50Q96JG6 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
VPS50Q96JG6 Y_RNA.301-201ENST00000364990 103 ntBASIC3.46□□□□□ -1.86
VPS50Q96JG6 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
VPS50Q96JG6 Y_RNA.399-201ENST00000383955 105 ntBASIC3.46□□□□□ -1.86
VPS50Q96JG6 RNU6-45P-201ENST00000384471 107 ntBASIC3.46□□□□□ -1.86
VPS50Q96JG6 Y_RNA.530-201ENST00000384587 101 ntBASIC3.46□□□□□ -1.86
VPS50Q96JG6 RNU1-101P-201ENST00000391171 127 ntBASIC3.46□□□□□ -1.86
VPS50Q96JG6 MIR1290-201ENST00000408735 78 ntBASIC3.46□□□□□ -1.86
VPS50Q96JG6 RNU2-33P-201ENST00000410344 192 ntBASIC3.46□□□□□ -1.86
VPS50Q96JG6 RNU6-1077P-201ENST00000410506 102 ntBASIC3.46□□□□□ -1.86
VPS50Q96JG6 RNA5SP31-201ENST00000411144 127 ntBASIC3.46□□□□□ -1.86
VPS50Q96JG6 AL365400.1-201ENST00000431854 640 ntBASIC3.46□□□□□ -1.86
VPS50Q96JG6 HMGN2P31-201ENST00000432430 273 ntBASIC3.46□□□□□ -1.86
VPS50Q96JG6 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.46□□□□□ -1.86
VPS50Q96JG6 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.46□□□□□ -1.86
VPS50Q96JG6 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.46□□□□□ -1.86
VPS50Q96JG6 CECR9-201ENST00000453421 199 ntBASIC3.46□□□□□ -1.86
VPS50Q96JG6 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.46□□□□□ -1.86
VPS50Q96JG6 RPL7P49-201ENST00000471402 708 ntBASIC3.46□□□□□ -1.86
VPS50Q96JG6 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.46□□□□□ -1.86
VPS50Q96JG6 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.46□□□□□ -1.86
VPS50Q96JG6 RNU6-1088P-201ENST00000516850 104 ntBASIC3.46□□□□□ -1.86
VPS50Q96JG6 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.46□□□□□ -1.86
VPS50Q96JG6 CASP1P1-201ENST00000526345 212 ntBASIC3.46□□□□□ -1.86
VPS50Q96JG6 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.46□□□□□ -1.86
VPS50Q96JG6 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.46□□□□□ -1.86
VPS50Q96JG6 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
VPS50Q96JG6 MIR4795-201ENST00000584182 89 ntBASIC3.46□□□□□ -1.86
VPS50Q96JG6 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.46□□□□□ -1.86
VPS50Q96JG6 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.46□□□□□ -1.86
VPS50Q96JG6 AL670379.10-201ENST00000604330 253 ntBASIC3.46□□□□□ -1.86
VPS50Q96JG6 AL670379.9-201ENST00000605428 253 ntBASIC3.46□□□□□ -1.86
VPS50Q96JG6 AC087045.1-201ENST00000605856 382 ntBASIC3.46□□□□□ -1.86
VPS50Q96JG6 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.46□□□□□ -1.86
VPS50Q96JG6 SNORD39.4-201ENST00000620099 78 ntBASIC3.46□□□□□ -1.86
VPS50Q96JG6 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
VPS50Q96JG6 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.46□□□□□ -1.86
VPS50Q96JG6 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
VPS50Q96JG6 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VPS50Q96JG6 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
VPS50Q96JG6 AC103988.1-201ENST00000566382 2177 ntBASIC3.45□□□□□ -1.86
VPS50Q96JG6 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
VPS50Q96JG6 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VPS50Q96JG6 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
VPS50Q96JG6 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.45□□□□□ -1.86
VPS50Q96JG6 SNORA75B-201ENST00000384053 137 ntBASIC3.45□□□□□ -1.86
VPS50Q96JG6 RNU6-434P-201ENST00000384376 107 ntBASIC3.45□□□□□ -1.86
VPS50Q96JG6 MT-TD-201ENST00000387419 68 ntBASIC3.45□□□□□ -1.86
VPS50Q96JG6 AC126124.2-201ENST00000413542 321 ntBASIC3.45□□□□□ -1.86
VPS50Q96JG6 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.45□□□□□ -1.86
VPS50Q96JG6 AC091286.1-201ENST00000431233 461 ntBASIC3.45□□□□□ -1.86
VPS50Q96JG6 AC092573.2-201ENST00000434546 243 ntBASIC3.45□□□□□ -1.86
VPS50Q96JG6 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.45□□□□□ -1.86
VPS50Q96JG6 AC005019.1-201ENST00000436455 431 ntBASIC3.45□□□□□ -1.86
VPS50Q96JG6 HMGB1P18-201ENST00000438801 619 ntBASIC3.45□□□□□ -1.86
VPS50Q96JG6 AC009237.8-201ENST00000445492 379 ntBASIC3.45□□□□□ -1.86
VPS50Q96JG6 UBE2V1P7-201ENST00000446395 340 ntBASIC3.45□□□□□ -1.86
VPS50Q96JG6 CYCSP35-201ENST00000451978 304 ntBASIC3.45□□□□□ -1.86
VPS50Q96JG6 FABP5P15-201ENST00000453566 214 ntBASIC3.45□□□□□ -1.86
VPS50Q96JG6 RPS4XP2-201ENST00000458402 793 ntBASIC3.45□□□□□ -1.86
VPS50Q96JG6 RNU7-167P-201ENST00000459160 62 ntBASIC3.45□□□□□ -1.86
VPS50Q96JG6 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.45□□□□□ -1.86
VPS50Q96JG6 AC117503.1-201ENST00000472241 394 ntBASIC3.45□□□□□ -1.86
VPS50Q96JG6 AC006483.1-201ENST00000487308 313 ntBASIC3.45□□□□□ -1.86
VPS50Q96JG6 AL160314.1-201ENST00000490836 438 ntBASIC3.45□□□□□ -1.86
VPS50Q96JG6 AC022493.1-201ENST00000492984 337 ntBASIC3.45□□□□□ -1.86
VPS50Q96JG6 MTND4LP22-201ENST00000508209 276 ntBASIC3.45□□□□□ -1.86
VPS50Q96JG6 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.45□□□□□ -1.86
VPS50Q96JG6 MTND3P25-201ENST00000509243 135 ntBASIC3.45□□□□□ -1.86
VPS50Q96JG6 HIGD1AP13-201ENST00000509878 289 ntBASIC3.45□□□□□ -1.86
VPS50Q96JG6 AC104619.4-201ENST00000510773 249 ntBASIC3.45□□□□□ -1.86
VPS50Q96JG6 RNU6-864P-201ENST00000516256 108 ntBASIC3.45□□□□□ -1.86
VPS50Q96JG6 RNA5SP290-201ENST00000517133 127 ntBASIC3.45□□□□□ -1.86
VPS50Q96JG6 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.45□□□□□ -1.86
VPS50Q96JG6 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.45□□□□□ -1.86
VPS50Q96JG6 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.45□□□□□ -1.86
VPS50Q96JG6 MTCO3P23-201ENST00000561363 289 ntBASIC3.45□□□□□ -1.86
VPS50Q96JG6 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.45□□□□□ -1.86
VPS50Q96JG6 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.45□□□□□ -1.86
VPS50Q96JG6 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.45□□□□□ -1.86
VPS50Q96JG6 AC107294.1-201ENST00000609524 467 ntBASIC3.45□□□□□ -1.86
VPS50Q96JG6 U2.17-201ENST00000611454 95 ntBASIC3.45□□□□□ -1.86
VPS50Q96JG6 uc_338.5-201ENST00000611839 155 ntBASIC3.45□□□□□ -1.86
VPS50Q96JG6 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.45□□□□□ -1.86
VPS50Q96JG6 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.45□□□□□ -1.86
VPS50Q96JG6 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
VPS50Q96JG6 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VPS50Q96JG6 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
VPS50Q96JG6 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
VPS50Q96JG6 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VPS50Q96JG6 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
VPS50Q96JG6 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
VPS50Q96JG6 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
VPS50Q96JG6 AC090740.1-201ENST00000623193 2262 ntBASIC3.44□□□□□ -1.86
VPS50Q96JG6 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
VPS50Q96JG6 SNORA63.1-201ENST00000362493 131 ntBASIC3.44□□□□□ -1.86
VPS50Q96JG6 RNU6-254P-201ENST00000363377 107 ntBASIC3.44□□□□□ -1.86
VPS50Q96JG6 Y_RNA.245-201ENST00000364493 95 ntBASIC3.44□□□□□ -1.86
VPS50Q96JG6 Y_RNA.813-201ENST00000364639 102 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms