Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 AP002404.1-201ENST00000532005 451 ntBASIC4.38□□□□□ -1.71
DDX11Q96FC9 AC008011.1-201ENST00000545989 227 ntBASIC4.38□□□□□ -1.71
DDX11Q96FC9 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.38□□□□□ -1.71
DDX11Q96FC9 AL138889.2-201ENST00000603883 242 ntBASIC4.38□□□□□ -1.71
DDX11Q96FC9 AC018462.2-201ENST00000605375 395 ntBASIC4.38□□□□□ -1.71
DDX11Q96FC9 PRR13P7-201ENST00000605538 430 ntBASIC4.38□□□□□ -1.71
DDX11Q96FC9 U2.17-201ENST00000611454 95 ntBASIC4.38□□□□□ -1.71
DDX11Q96FC9 MIR6128-201ENST00000615528 109 ntBASIC4.38□□□□□ -1.71
DDX11Q96FC9 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.38□□□□□ -1.71
DDX11Q96FC9 U7.8-201ENST00000619968 63 ntBASIC4.38□□□□□ -1.71
DDX11Q96FC9 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC4.38□□□□□ -1.71
DDX11Q96FC9 AC110801.1-201ENST00000623590 212 ntBASIC4.38□□□□□ -1.71
DDX11Q96FC9 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.38□□□□□ -1.71
DDX11Q96FC9 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
DDX11Q96FC9 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.38□□□□□ -1.71
DDX11Q96FC9 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
DDX11Q96FC9 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.37□□□□□ -1.71
DDX11Q96FC9 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.37□□□□□ -1.71
DDX11Q96FC9 SET-203ENST00000372688 801 ntTSL 2 BASIC4.37□□□□□ -1.71
DDX11Q96FC9 RNU6-1222P-201ENST00000384615 107 ntBASIC4.37□□□□□ -1.71
DDX11Q96FC9 RNU6-14P-201ENST00000384630 106 ntBASIC4.37□□□□□ -1.71
DDX11Q96FC9 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
DDX11Q96FC9 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
DDX11Q96FC9 AL139039.1-201ENST00000401900 692 ntBASIC4.37□□□□□ -1.71
DDX11Q96FC9 AL583834.1-201ENST00000406943 343 ntBASIC4.37□□□□□ -1.71
DDX11Q96FC9 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.37□□□□□ -1.71
DDX11Q96FC9 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.37□□□□□ -1.71
DDX11Q96FC9 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.37□□□□□ -1.71
DDX11Q96FC9 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.37□□□□□ -1.71
DDX11Q96FC9 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC4.37□□□□□ -1.71
DDX11Q96FC9 AC096644.2-201ENST00000429278 159 ntBASIC4.37□□□□□ -1.71
DDX11Q96FC9 NDUFB1P1-201ENST00000435191 180 ntBASIC4.37□□□□□ -1.71
DDX11Q96FC9 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC4.37□□□□□ -1.71
DDX11Q96FC9 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.37□□□□□ -1.71
DDX11Q96FC9 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4.37□□□□□ -1.71
DDX11Q96FC9 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.37□□□□□ -1.71
DDX11Q96FC9 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.37□□□□□ -1.71
DDX11Q96FC9 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
DDX11Q96FC9 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.37□□□□□ -1.71
DDX11Q96FC9 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.37□□□□□ -1.71
DDX11Q96FC9 AC106782.4-201ENST00000568264 210 ntBASIC4.37□□□□□ -1.71
DDX11Q96FC9 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.37□□□□□ -1.71
DDX11Q96FC9 BNIP3P16-201ENST00000589779 534 ntBASIC4.37□□□□□ -1.71
DDX11Q96FC9 AL031176.1-201ENST00000604554 466 ntBASIC4.37□□□□□ -1.71
DDX11Q96FC9 AC012468.1-201ENST00000604888 430 ntBASIC4.37□□□□□ -1.71
DDX11Q96FC9 AC009229.3-201ENST00000608056 282 ntBASIC4.37□□□□□ -1.71
DDX11Q96FC9 AC006157.1-201ENST00000611750 366 ntBASIC4.37□□□□□ -1.71
DDX11Q96FC9 ATP5A1P2-202ENST00000616464 443 ntBASIC4.37□□□□□ -1.71
DDX11Q96FC9 PISRT1.1-201ENST00000616930 107 ntBASIC4.37□□□□□ -1.71
DDX11Q96FC9 AC243312.2-201ENST00000623340 601 ntBASIC4.37□□□□□ -1.71
DDX11Q96FC9 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
DDX11Q96FC9 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
DDX11Q96FC9 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
DDX11Q96FC9 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.36□□□□□ -1.71
DDX11Q96FC9 MFSD8-236ENST00000641509 4050 ntBASIC4.36□□□□□ -1.71
DDX11Q96FC9 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
DDX11Q96FC9 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.36□□□□□ -1.71
DDX11Q96FC9 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.36□□□□□ -1.71
DDX11Q96FC9 SNORA31-201ENST00000362607 130 ntBASIC4.36□□□□□ -1.71
DDX11Q96FC9 Y_RNA.153-201ENST00000363615 91 ntBASIC4.36□□□□□ -1.71
DDX11Q96FC9 Y_RNA.455-201ENST00000384230 98 ntBASIC4.36□□□□□ -1.71
DDX11Q96FC9 MIR607-201ENST00000385241 96 ntBASIC4.36□□□□□ -1.71
DDX11Q96FC9 Y_RNA.645-201ENST00000391229 102 ntBASIC4.36□□□□□ -1.71
DDX11Q96FC9 RNU6-1050P-201ENST00000410388 107 ntBASIC4.36□□□□□ -1.71
DDX11Q96FC9 RNU6-847P-201ENST00000411115 108 ntBASIC4.36□□□□□ -1.71
DDX11Q96FC9 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.36□□□□□ -1.71
DDX11Q96FC9 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.36□□□□□ -1.71
DDX11Q96FC9 AC008267.5-201ENST00000424928 265 ntBASIC4.36□□□□□ -1.71
DDX11Q96FC9 AC093151.1-201ENST00000427711 313 ntBASIC4.36□□□□□ -1.71
DDX11Q96FC9 USP9YP16-201ENST00000430287 407 ntBASIC4.36□□□□□ -1.71
DDX11Q96FC9 CYCSP43-201ENST00000438233 310 ntBASIC4.36□□□□□ -1.71
DDX11Q96FC9 FABP5P13-201ENST00000452144 328 ntBASIC4.36□□□□□ -1.71
DDX11Q96FC9 GSTA11P-201ENST00000452866 669 ntBASIC4.36□□□□□ -1.71
DDX11Q96FC9 USP9YP23-201ENST00000455085 407 ntBASIC4.36□□□□□ -1.71
DDX11Q96FC9 U8.20-201ENST00000459445 131 ntBASIC4.36□□□□□ -1.71
DDX11Q96FC9 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.36□□□□□ -1.71
DDX11Q96FC9 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.36□□□□□ -1.71
DDX11Q96FC9 AC106707.2-201ENST00000484182 374 ntBASIC4.36□□□□□ -1.71
DDX11Q96FC9 RPL7P23-201ENST00000493874 747 ntBASIC4.36□□□□□ -1.71
DDX11Q96FC9 AC009901.1-201ENST00000506703 541 ntBASIC4.36□□□□□ -1.71
DDX11Q96FC9 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.36□□□□□ -1.71
DDX11Q96FC9 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.36□□□□□ -1.71
DDX11Q96FC9 RN7SKP18-201ENST00000516005 275 ntBASIC4.36□□□□□ -1.71
DDX11Q96FC9 RN7SKP83-201ENST00000516512 178 ntBASIC4.36□□□□□ -1.71
DDX11Q96FC9 RNU6-1332P-201ENST00000516666 104 ntBASIC4.36□□□□□ -1.71
DDX11Q96FC9 RNU6-1271P-201ENST00000517049 105 ntBASIC4.36□□□□□ -1.71
DDX11Q96FC9 AC007991.1-201ENST00000522680 631 ntBASIC4.36□□□□□ -1.71
DDX11Q96FC9 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.36□□□□□ -1.71
DDX11Q96FC9 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.36□□□□□ -1.71
DDX11Q96FC9 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC4.36□□□□□ -1.71
DDX11Q96FC9 AC067852.3-201ENST00000589177 561 ntBASIC4.36□□□□□ -1.71
DDX11Q96FC9 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
DDX11Q96FC9 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.36□□□□□ -1.71
DDX11Q96FC9 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.36□□□□□ -1.71
DDX11Q96FC9 AL158032.1-201ENST00000605401 106 ntBASIC4.36□□□□□ -1.71
DDX11Q96FC9 U3.45-201ENST00000607547 219 ntBASIC4.36□□□□□ -1.71
DDX11Q96FC9 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.36□□□□□ -1.71
DDX11Q96FC9 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
DDX11Q96FC9 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
DDX11Q96FC9 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms