Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 CASP1P1-201ENST00000526345 212 ntBASIC3.65□□□□□ -1.83
TRIM43Q96BQ3 AL118558.2-201ENST00000556294 238 ntBASIC3.65□□□□□ -1.83
TRIM43Q96BQ3 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.65□□□□□ -1.83
TRIM43Q96BQ3 AL157871.3-201ENST00000557231 293 ntBASIC3.65□□□□□ -1.83
TRIM43Q96BQ3 MIR3186-201ENST00000577404 85 ntBASIC3.65□□□□□ -1.83
TRIM43Q96BQ3 MIR1273C-201ENST00000578669 77 ntBASIC3.65□□□□□ -1.83
TRIM43Q96BQ3 MIR5047-201ENST00000579212 100 ntBASIC3.65□□□□□ -1.83
TRIM43Q96BQ3 AC104984.5-201ENST00000586878 94 ntBASIC3.65□□□□□ -1.83
TRIM43Q96BQ3 AC092747.3-201ENST00000603769 301 ntBASIC3.65□□□□□ -1.83
TRIM43Q96BQ3 Z82243.1-201ENST00000609432 473 ntBASIC3.65□□□□□ -1.83
TRIM43Q96BQ3 AC027309.3-201ENST00000623419 351 ntBASIC3.65□□□□□ -1.83
TRIM43Q96BQ3 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.65□□□□□ -1.83
TRIM43Q96BQ3 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.65□□□□□ -1.83
TRIM43Q96BQ3 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
TRIM43Q96BQ3 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.65□□□□□ -1.83
TRIM43Q96BQ3 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TRIM43Q96BQ3 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM43Q96BQ3 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM43Q96BQ3 FTLP6-201ENST00000355274 422 ntBASIC3.64□□□□□ -1.83
TRIM43Q96BQ3 Y_RNA.33-201ENST00000362591 102 ntBASIC3.64□□□□□ -1.83
TRIM43Q96BQ3 RNU6-395P-201ENST00000365662 106 ntBASIC3.64□□□□□ -1.83
TRIM43Q96BQ3 RNU6-45P-201ENST00000384471 107 ntBASIC3.64□□□□□ -1.83
TRIM43Q96BQ3 RNA5SP219-201ENST00000390940 113 ntBASIC3.64□□□□□ -1.83
TRIM43Q96BQ3 SNORA16.2-201ENST00000390991 127 ntBASIC3.64□□□□□ -1.83
TRIM43Q96BQ3 AL139095.1-201ENST00000404326 391 ntBASIC3.64□□□□□ -1.83
TRIM43Q96BQ3 POLHP1-201ENST00000411806 470 ntBASIC3.64□□□□□ -1.83
TRIM43Q96BQ3 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.64□□□□□ -1.83
TRIM43Q96BQ3 ZNF863P-201ENST00000426746 417 ntBASIC3.64□□□□□ -1.83
TRIM43Q96BQ3 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.64□□□□□ -1.83
TRIM43Q96BQ3 AL353705.1-201ENST00000433468 480 ntBASIC3.64□□□□□ -1.83
TRIM43Q96BQ3 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.64□□□□□ -1.83
TRIM43Q96BQ3 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.64□□□□□ -1.83
TRIM43Q96BQ3 HIGD1AP13-201ENST00000509878 289 ntBASIC3.64□□□□□ -1.83
TRIM43Q96BQ3 RNU6-189P-201ENST00000516120 101 ntBASIC3.64□□□□□ -1.83
TRIM43Q96BQ3 RNU6-1314P-201ENST00000517139 104 ntBASIC3.64□□□□□ -1.83
TRIM43Q96BQ3 AP002404.1-201ENST00000532005 451 ntBASIC3.64□□□□□ -1.83
TRIM43Q96BQ3 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.64□□□□□ -1.83
TRIM43Q96BQ3 HIGD1AP1-201ENST00000550979 275 ntBASIC3.64□□□□□ -1.83
TRIM43Q96BQ3 AC025253.1-201ENST00000613623 543 ntBASIC3.64□□□□□ -1.83
TRIM43Q96BQ3 MIR6715A-201ENST00000615929 79 ntBASIC3.64□□□□□ -1.83
TRIM43Q96BQ3 AL136221.1-201ENST00000621449 509 ntBASIC3.64□□□□□ -1.83
TRIM43Q96BQ3 AC018692.3-201ENST00000623929 123 ntBASIC3.64□□□□□ -1.83
TRIM43Q96BQ3 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM43Q96BQ3 AC007256.1-201ENST00000392253 2765 ntBASIC3.64□□□□□ -1.83
TRIM43Q96BQ3 AL359693.1-201ENST00000614959 2407 ntBASIC3.64□□□□□ -1.83
TRIM43Q96BQ3 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM43Q96BQ3 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM43Q96BQ3 MTND4P35-201ENST00000604257 1375 ntBASIC3.63□□□□□ -1.83
TRIM43Q96BQ3 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM43Q96BQ3 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM43Q96BQ3 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
TRIM43Q96BQ3 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.63□□□□□ -1.83
TRIM43Q96BQ3 RNA5SP322-201ENST00000363617 119 ntBASIC3.63□□□□□ -1.83
TRIM43Q96BQ3 RNU6-522P-201ENST00000364497 107 ntBASIC3.63□□□□□ -1.83
TRIM43Q96BQ3 Y_RNA.399-201ENST00000383955 105 ntBASIC3.63□□□□□ -1.83
TRIM43Q96BQ3 MIR591-201ENST00000385290 95 ntBASIC3.63□□□□□ -1.83
TRIM43Q96BQ3 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
TRIM43Q96BQ3 RNU6-510P-201ENST00000391239 108 ntBASIC3.63□□□□□ -1.83
TRIM43Q96BQ3 RNU2-68P-201ENST00000410878 191 ntBASIC3.63□□□□□ -1.83
TRIM43Q96BQ3 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.63□□□□□ -1.83
TRIM43Q96BQ3 BX682237.1-201ENST00000415016 335 ntBASIC3.63□□□□□ -1.83
TRIM43Q96BQ3 RPL21P90-201ENST00000415692 466 ntBASIC3.63□□□□□ -1.83
TRIM43Q96BQ3 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.63□□□□□ -1.83
TRIM43Q96BQ3 AL669831.1-202ENST00000428504 417 ntBASIC3.63□□□□□ -1.83
TRIM43Q96BQ3 GTF2IP13-201ENST00000438487 386 ntBASIC3.63□□□□□ -1.83
TRIM43Q96BQ3 USP9YP8-201ENST00000441913 500 ntBASIC3.63□□□□□ -1.83
TRIM43Q96BQ3 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.63□□□□□ -1.83
TRIM43Q96BQ3 HMGN1P12-201ENST00000499125 195 ntBASIC3.63□□□□□ -1.83
TRIM43Q96BQ3 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.63□□□□□ -1.83
TRIM43Q96BQ3 AC008885.1-201ENST00000514930 301 ntBASIC3.63□□□□□ -1.83
TRIM43Q96BQ3 RNU2-69P-201ENST00000516061 100 ntBASIC3.63□□□□□ -1.83
TRIM43Q96BQ3 RNA5SP165-201ENST00000517142 115 ntBASIC3.63□□□□□ -1.83
TRIM43Q96BQ3 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.63□□□□□ -1.83
TRIM43Q96BQ3 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM43Q96BQ3 AP003122.3-201ENST00000526316 255 ntBASIC3.63□□□□□ -1.83
TRIM43Q96BQ3 AC084851.1-201ENST00000529105 249 ntBASIC3.63□□□□□ -1.83
TRIM43Q96BQ3 AC243972.3-201ENST00000539655 198 ntBASIC3.63□□□□□ -1.83
TRIM43Q96BQ3 AP000763.2-201ENST00000540641 163 ntBASIC3.63□□□□□ -1.83
TRIM43Q96BQ3 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.63□□□□□ -1.83
TRIM43Q96BQ3 OR11H5P-201ENST00000554039 926 ntBASIC3.63□□□□□ -1.83
TRIM43Q96BQ3 PSMA3P-201ENST00000555485 635 ntBASIC3.63□□□□□ -1.83
TRIM43Q96BQ3 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.63□□□□□ -1.83
TRIM43Q96BQ3 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.63□□□□□ -1.83
TRIM43Q96BQ3 KLKP1-201ENST00000595979 403 ntBASIC3.63□□□□□ -1.83
TRIM43Q96BQ3 AC136601.2-201ENST00000604356 474 ntBASIC3.63□□□□□ -1.83
TRIM43Q96BQ3 AL357078.3-201ENST00000607528 618 ntBASIC3.63□□□□□ -1.83
TRIM43Q96BQ3 AC022306.2-201ENST00000617563 647 ntBASIC3.63□□□□□ -1.83
TRIM43Q96BQ3 AC022418.1-201ENST00000624118 445 ntBASIC3.63□□□□□ -1.83
TRIM43Q96BQ3 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM43Q96BQ3 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM43Q96BQ3 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM43Q96BQ3 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.63□□□□□ -1.83
TRIM43Q96BQ3 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM43Q96BQ3 AC022336.2-201ENST00000568966 2538 ntBASIC3.62□□□□□ -1.83
TRIM43Q96BQ3 Y_RNA.70-201ENST00000362886 110 ntBASIC3.62□□□□□ -1.83
TRIM43Q96BQ3 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.62□□□□□ -1.83
TRIM43Q96BQ3 RNU6-140P-201ENST00000384566 108 ntBASIC3.62□□□□□ -1.83
TRIM43Q96BQ3 Y_RNA.530-201ENST00000384587 101 ntBASIC3.62□□□□□ -1.83
TRIM43Q96BQ3 RNU1-89P-201ENST00000384592 164 ntBASIC3.62□□□□□ -1.83
TRIM43Q96BQ3 RNU6-1009P-201ENST00000390996 107 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms