Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 MTND4P14-201ENST00000435799 1354 ntBASIC3.27□□□□□ -1.89
SH3KBP1Q96B97 MTND4P35-201ENST00000604257 1375 ntBASIC3.27□□□□□ -1.89
SH3KBP1Q96B97 ASNSP3-201ENST00000451989 1306 ntBASIC3.27□□□□□ -1.89
SH3KBP1Q96B97 RNU1-75P-201ENST00000347264 129 ntBASIC3.27□□□□□ -1.89
SH3KBP1Q96B97 RNA5SP197-201ENST00000363357 119 ntBASIC3.27□□□□□ -1.89
SH3KBP1Q96B97 MIR634-201ENST00000385208 97 ntBASIC3.27□□□□□ -1.89
SH3KBP1Q96B97 MIR301A-201ENST00000385261 86 ntBASIC3.27□□□□□ -1.89
SH3KBP1Q96B97 RNU6-1025P-201ENST00000410629 104 ntBASIC3.27□□□□□ -1.89
SH3KBP1Q96B97 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.27□□□□□ -1.89
SH3KBP1Q96B97 AC005300.1-201ENST00000428401 373 ntBASIC3.27□□□□□ -1.89
SH3KBP1Q96B97 BX679664.1-201ENST00000434429 253 ntBASIC3.27□□□□□ -1.89
SH3KBP1Q96B97 CYCSP32-201ENST00000440548 321 ntBASIC3.27□□□□□ -1.89
SH3KBP1Q96B97 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.27□□□□□ -1.89
SH3KBP1Q96B97 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.27□□□□□ -1.89
SH3KBP1Q96B97 BX510359.1-201ENST00000456973 237 ntBASIC3.27□□□□□ -1.89
SH3KBP1Q96B97 SNRPFP3-201ENST00000457792 225 ntBASIC3.27□□□□□ -1.89
SH3KBP1Q96B97 AC010401.1-201ENST00000463867 348 ntBASIC3.27□□□□□ -1.89
SH3KBP1Q96B97 EIF4EP3-201ENST00000498782 656 ntBASIC3.27□□□□□ -1.89
SH3KBP1Q96B97 MTCO3P9-201ENST00000506989 781 ntBASIC3.27□□□□□ -1.89
SH3KBP1Q96B97 AF213884.2-201ENST00000510417 903 ntBASIC3.27□□□□□ -1.89
SH3KBP1Q96B97 RNU6-835P-201ENST00000516974 104 ntBASIC3.27□□□□□ -1.89
SH3KBP1Q96B97 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SH3KBP1Q96B97 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.27□□□□□ -1.89
SH3KBP1Q96B97 AL512310.1-201ENST00000548639 172 ntBASIC3.27□□□□□ -1.89
SH3KBP1Q96B97 BNIP3P6-201ENST00000549284 499 ntBASIC3.27□□□□□ -1.89
SH3KBP1Q96B97 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.27□□□□□ -1.89
SH3KBP1Q96B97 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.27□□□□□ -1.89
SH3KBP1Q96B97 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
SH3KBP1Q96B97 AC011471.1-201ENST00000585766 187 ntBASIC3.27□□□□□ -1.89
SH3KBP1Q96B97 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.27□□□□□ -1.89
SH3KBP1Q96B97 AC008739.2-201ENST00000597006 317 ntBASIC3.27□□□□□ -1.89
SH3KBP1Q96B97 BNIP3P30-201ENST00000601184 574 ntBASIC3.27□□□□□ -1.89
SH3KBP1Q96B97 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.27□□□□□ -1.89
SH3KBP1Q96B97 AL035413.2-201ENST00000604801 525 ntBASIC3.27□□□□□ -1.89
SH3KBP1Q96B97 AC073657.2-201ENST00000605661 303 ntBASIC3.27□□□□□ -1.89
SH3KBP1Q96B97 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SH3KBP1Q96B97 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.27□□□□□ -1.89
SH3KBP1Q96B97 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.27□□□□□ -1.89
SH3KBP1Q96B97 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
SH3KBP1Q96B97 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SH3KBP1Q96B97 AC026241.1-201ENST00000517873 2142 ntBASIC3.26□□□□□ -1.89
SH3KBP1Q96B97 AL365361.1-201ENST00000566942 3481 ntBASIC3.26□□□□□ -1.89
SH3KBP1Q96B97 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
SH3KBP1Q96B97 RNY4P14-201ENST00000363656 96 ntBASIC3.26□□□□□ -1.89
SH3KBP1Q96B97 Y_RNA.295-201ENST00000364918 102 ntBASIC3.26□□□□□ -1.89
SH3KBP1Q96B97 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
SH3KBP1Q96B97 AL606923.1-201ENST00000406616 190 ntBASIC3.26□□□□□ -1.89
SH3KBP1Q96B97 RNU2-29P-201ENST00000410423 189 ntBASIC3.26□□□□□ -1.89
SH3KBP1Q96B97 RPL21P90-201ENST00000415692 466 ntBASIC3.26□□□□□ -1.89
SH3KBP1Q96B97 AL513477.1-202ENST00000417061 214 ntBASIC3.26□□□□□ -1.89
SH3KBP1Q96B97 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.26□□□□□ -1.89
SH3KBP1Q96B97 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.26□□□□□ -1.89
SH3KBP1Q96B97 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.26□□□□□ -1.89
SH3KBP1Q96B97 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.26□□□□□ -1.89
SH3KBP1Q96B97 AC003071.1-201ENST00000451219 789 ntBASIC3.26□□□□□ -1.89
SH3KBP1Q96B97 RNU6-261P-201ENST00000459506 102 ntBASIC3.26□□□□□ -1.89
SH3KBP1Q96B97 CENPBD1P1-201ENST00000464061 469 ntBASIC3.26□□□□□ -1.89
SH3KBP1Q96B97 RPL21P13-201ENST00000488305 481 ntBASIC3.26□□□□□ -1.89
SH3KBP1Q96B97 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.26□□□□□ -1.89
SH3KBP1Q96B97 RNU6-1038P-201ENST00000516516 104 ntBASIC3.26□□□□□ -1.89
SH3KBP1Q96B97 RNU6-1315P-201ENST00000517187 99 ntBASIC3.26□□□□□ -1.89
SH3KBP1Q96B97 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.26□□□□□ -1.89
SH3KBP1Q96B97 AC025755.1-201ENST00000521306 278 ntBASIC3.26□□□□□ -1.89
SH3KBP1Q96B97 AC109635.3-201ENST00000529536 185 ntBASIC3.26□□□□□ -1.89
SH3KBP1Q96B97 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.26□□□□□ -1.89
SH3KBP1Q96B97 AL157687.1-201ENST00000554853 619 ntBASIC3.26□□□□□ -1.89
SH3KBP1Q96B97 H3F3AP1-201ENST00000559984 334 ntBASIC3.26□□□□□ -1.89
SH3KBP1Q96B97 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.26□□□□□ -1.89
SH3KBP1Q96B97 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.26□□□□□ -1.89
SH3KBP1Q96B97 MIR3651-201ENST00000630427 90 ntBASIC3.26□□□□□ -1.89
SH3KBP1Q96B97 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
SH3KBP1Q96B97 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
SH3KBP1Q96B97 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.26□□□□□ -1.89
SH3KBP1Q96B97 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
SH3KBP1Q96B97 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.26□□□□□ -1.89
SH3KBP1Q96B97 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SH3KBP1Q96B97 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
SH3KBP1Q96B97 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SH3KBP1Q96B97 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.25□□□□□ -1.89
SH3KBP1Q96B97 MIR578-201ENST00000384828 96 ntBASIC3.25□□□□□ -1.89
SH3KBP1Q96B97 MIR888-201ENST00000401186 77 ntBASIC3.25□□□□□ -1.89
SH3KBP1Q96B97 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.25□□□□□ -1.89
SH3KBP1Q96B97 RNU4-47P-201ENST00000410876 114 ntBASIC3.25□□□□□ -1.89
SH3KBP1Q96B97 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.25□□□□□ -1.89
SH3KBP1Q96B97 AL353678.1-201ENST00000422735 741 ntBASIC3.25□□□□□ -1.89
SH3KBP1Q96B97 AC007560.1-201ENST00000426912 237 ntBASIC3.25□□□□□ -1.89
SH3KBP1Q96B97 AL591704.1-201ENST00000432574 275 ntBASIC3.25□□□□□ -1.89
SH3KBP1Q96B97 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.25□□□□□ -1.89
SH3KBP1Q96B97 AC125238.1-201ENST00000448842 249 ntBASIC3.25□□□□□ -1.89
SH3KBP1Q96B97 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.25□□□□□ -1.89
SH3KBP1Q96B97 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.25□□□□□ -1.89
SH3KBP1Q96B97 AC021205.2-201ENST00000480069 347 ntBASIC3.25□□□□□ -1.89
SH3KBP1Q96B97 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.25□□□□□ -1.89
SH3KBP1Q96B97 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.25□□□□□ -1.89
SH3KBP1Q96B97 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.25□□□□□ -1.89
SH3KBP1Q96B97 AL157871.3-201ENST00000557231 293 ntBASIC3.25□□□□□ -1.89
SH3KBP1Q96B97 AC106782.4-201ENST00000568264 210 ntBASIC3.25□□□□□ -1.89
SH3KBP1Q96B97 MIR5680-201ENST00000577577 84 ntBASIC3.25□□□□□ -1.89
SH3KBP1Q96B97 MIR1273C-201ENST00000578669 77 ntBASIC3.25□□□□□ -1.89
SH3KBP1Q96B97 U6.99-201ENST00000637524 83 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 463 ms