Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 ZNF285B-201ENST00000561698 1767 ntBASIC4.1□□□□□ -1.75
ERCC4Q92889 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ERCC4Q92889 Y_RNA.445-201ENST00000384168 102 ntBASIC4.1□□□□□ -1.75
ERCC4Q92889 RNU6-1160P-201ENST00000384546 104 ntBASIC4.1□□□□□ -1.75
ERCC4Q92889 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.1□□□□□ -1.75
ERCC4Q92889 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.1□□□□□ -1.75
ERCC4Q92889 AC245054.2-201ENST00000415639 319 ntBASIC4.1□□□□□ -1.75
ERCC4Q92889 RPL31P12-201ENST00000422587 358 ntBASIC4.1□□□□□ -1.75
ERCC4Q92889 PMCHL1-202ENST00000423102 261 ntBASIC4.1□□□□□ -1.75
ERCC4Q92889 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.1□□□□□ -1.75
ERCC4Q92889 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.1□□□□□ -1.75
ERCC4Q92889 AL359672.1-201ENST00000442302 409 ntBASIC4.1□□□□□ -1.75
ERCC4Q92889 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.1□□□□□ -1.75
ERCC4Q92889 MTCO3P10-201ENST00000455912 772 ntBASIC4.1□□□□□ -1.75
ERCC4Q92889 RN7SL132P-201ENST00000478131 296 ntBASIC4.1□□□□□ -1.75
ERCC4Q92889 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.1□□□□□ -1.75
ERCC4Q92889 PHBP14-201ENST00000512887 367 ntBASIC4.1□□□□□ -1.75
ERCC4Q92889 SCARNA15.2-201ENST00000516409 127 ntBASIC4.1□□□□□ -1.75
ERCC4Q92889 RNU6-1016P-201ENST00000516689 94 ntBASIC4.1□□□□□ -1.75
ERCC4Q92889 AC087854.1-201ENST00000519706 414 ntBASIC4.1□□□□□ -1.75
ERCC4Q92889 RNU6-323P-201ENST00000521915 107 ntBASIC4.1□□□□□ -1.75
ERCC4Q92889 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.1□□□□□ -1.75
ERCC4Q92889 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.1□□□□□ -1.75
ERCC4Q92889 MED28P6-201ENST00000558776 231 ntBASIC4.1□□□□□ -1.75
ERCC4Q92889 RN7SL703P-201ENST00000578485 302 ntBASIC4.1□□□□□ -1.75
ERCC4Q92889 LRRC37A5P-203ENST00000580181 585 ntBASIC4.1□□□□□ -1.75
ERCC4Q92889 AC006504.6-201ENST00000590142 199 ntBASIC4.1□□□□□ -1.75
ERCC4Q92889 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ERCC4Q92889 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ERCC4Q92889 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
ERCC4Q92889 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ERCC4Q92889 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.1□□□□□ -1.75
ERCC4Q92889 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.1□□□□□ -1.75
ERCC4Q92889 AC007823.1-201ENST00000569932 1566 ntBASIC4.1□□□□□ -1.75
ERCC4Q92889 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ERCC4Q92889 MTND5P10-201ENST00000603719 1809 ntBASIC4.09□□□□□ -1.75
ERCC4Q92889 UBE2L2-201ENST00000254302 429 ntBASIC4.09□□□□□ -1.75
ERCC4Q92889 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
ERCC4Q92889 RNU6-266P-201ENST00000364225 107 ntBASIC4.09□□□□□ -1.75
ERCC4Q92889 RNU6-1303P-201ENST00000364841 107 ntBASIC4.09□□□□□ -1.75
ERCC4Q92889 HSPE1P26-201ENST00000405341 275 ntBASIC4.09□□□□□ -1.75
ERCC4Q92889 RNU2-71P-201ENST00000411395 189 ntBASIC4.09□□□□□ -1.75
ERCC4Q92889 RPL21P90-201ENST00000415692 466 ntBASIC4.09□□□□□ -1.75
ERCC4Q92889 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
ERCC4Q92889 NDUFB4P7-201ENST00000423198 363 ntBASIC4.09□□□□□ -1.75
ERCC4Q92889 AL590632.1-201ENST00000424289 371 ntBASIC4.09□□□□□ -1.75
ERCC4Q92889 AC091390.3-201ENST00000426478 338 ntBASIC4.09□□□□□ -1.75
ERCC4Q92889 AL451062.2-201ENST00000427515 271 ntBASIC4.09□□□□□ -1.75
ERCC4Q92889 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.09□□□□□ -1.75
ERCC4Q92889 HSPD1P21-201ENST00000436541 245 ntBASIC4.09□□□□□ -1.75
ERCC4Q92889 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.09□□□□□ -1.75
ERCC4Q92889 snoU13.4-201ENST00000458916 104 ntBASIC4.09□□□□□ -1.75
ERCC4Q92889 RPL21P104-201ENST00000464143 478 ntBASIC4.09□□□□□ -1.75
ERCC4Q92889 AC104472.2-201ENST00000469035 601 ntBASIC4.09□□□□□ -1.75
ERCC4Q92889 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.09□□□□□ -1.75
ERCC4Q92889 AC116337.1-201ENST00000509680 687 ntBASIC4.09□□□□□ -1.75
ERCC4Q92889 RNU6-1332P-201ENST00000516666 104 ntBASIC4.09□□□□□ -1.75
ERCC4Q92889 RNA5SP471-201ENST00000516971 106 ntBASIC4.09□□□□□ -1.75
ERCC4Q92889 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.09□□□□□ -1.75
ERCC4Q92889 IGHV3-76-201ENST00000522465 295 ntBASIC4.09□□□□□ -1.75
ERCC4Q92889 SNRPGP18-201ENST00000553000 214 ntBASIC4.09□□□□□ -1.75
ERCC4Q92889 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.09□□□□□ -1.75
ERCC4Q92889 MIR3921-201ENST00000577308 85 ntBASIC4.09□□□□□ -1.75
ERCC4Q92889 MIR3690-201ENST00000580266 75 ntBASIC4.09□□□□□ -1.75
ERCC4Q92889 MIR5692A1-201ENST00000580523 69 ntBASIC4.09□□□□□ -1.75
ERCC4Q92889 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.09□□□□□ -1.75
ERCC4Q92889 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.09□□□□□ -1.75
ERCC4Q92889 RNU1-30P-201ENST00000606575 163 ntBASIC4.09□□□□□ -1.75
ERCC4Q92889 AC002044.1-201ENST00000606707 158 ntBASIC4.09□□□□□ -1.75
ERCC4Q92889 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC4.09□□□□□ -1.75
ERCC4Q92889 AC010378.1-201ENST00000619270 362 ntBASIC4.09□□□□□ -1.75
ERCC4Q92889 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.09□□□□□ -1.75
ERCC4Q92889 KPNA2P1-201ENST00000458289 1591 ntBASIC4.09□□□□□ -1.75
ERCC4Q92889 OR4G2P-202ENST00000641004 1759 ntBASIC4.09□□□□□ -1.76
ERCC4Q92889 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.08□□□□□ -1.76
ERCC4Q92889 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC4.08□□□□□ -1.76
ERCC4Q92889 Y_RNA.31-201ENST00000362574 102 ntBASIC4.08□□□□□ -1.76
ERCC4Q92889 SNORD3E-201ENST00000362899 217 ntBASIC4.08□□□□□ -1.76
ERCC4Q92889 RNU6-310P-201ENST00000384655 107 ntBASIC4.08□□□□□ -1.76
ERCC4Q92889 RNU6-95P-201ENST00000384697 107 ntBASIC4.08□□□□□ -1.76
ERCC4Q92889 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
ERCC4Q92889 SNORA3.3-201ENST00000408712 125 ntBASIC4.08□□□□□ -1.76
ERCC4Q92889 RNU2-3P-201ENST00000410144 191 ntBASIC4.08□□□□□ -1.76
ERCC4Q92889 RNU6-607P-201ENST00000411283 108 ntBASIC4.08□□□□□ -1.76
ERCC4Q92889 Z85995.1-201ENST00000415547 335 ntBASIC4.08□□□□□ -1.76
ERCC4Q92889 AC017079.2-201ENST00000416102 485 ntBASIC4.08□□□□□ -1.76
ERCC4Q92889 MTND5P19-201ENST00000424872 1794 ntBASIC4.08□□□□□ -1.76
ERCC4Q92889 RPL7P2-201ENST00000427639 268 ntBASIC4.08□□□□□ -1.76
ERCC4Q92889 AC026801.1-201ENST00000497178 464 ntBASIC4.08□□□□□ -1.76
ERCC4Q92889 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.08□□□□□ -1.76
ERCC4Q92889 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
ERCC4Q92889 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.08□□□□□ -1.76
ERCC4Q92889 AC026782.1-201ENST00000512952 449 ntBASIC4.08□□□□□ -1.76
ERCC4Q92889 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.08□□□□□ -1.76
ERCC4Q92889 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC4.08□□□□□ -1.76
ERCC4Q92889 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.08□□□□□ -1.76
ERCC4Q92889 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.08□□□□□ -1.76
ERCC4Q92889 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.08□□□□□ -1.76
ERCC4Q92889 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.08□□□□□ -1.76
ERCC4Q92889 AC098826.3-201ENST00000603823 466 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 166.4 ms