Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.06□□□□□ -1.92
SNED1Q8TER0 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.06□□□□□ -1.92
SNED1Q8TER0 HSPA8P13-201ENST00000523715 472 ntBASIC3.06□□□□□ -1.92
SNED1Q8TER0 AP005639.2-201ENST00000527592 928 ntBASIC3.06□□□□□ -1.92
SNED1Q8TER0 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.06□□□□□ -1.92
SNED1Q8TER0 SULT1C2P1-202ENST00000562418 459 ntBASIC3.06□□□□□ -1.92
SNED1Q8TER0 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.06□□□□□ -1.92
SNED1Q8TER0 AC090574.1-201ENST00000623186 233 ntBASIC3.06□□□□□ -1.92
SNED1Q8TER0 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.06□□□□□ -1.92
SNED1Q8TER0 MTND5P6-201ENST00000422338 1798 ntBASIC3.06□□□□□ -1.92
SNED1Q8TER0 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SNED1Q8TER0 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.06□□□□□ -1.92
SNED1Q8TER0 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
SNED1Q8TER0 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.06□□□□□ -1.92
SNED1Q8TER0 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.06□□□□□ -1.92
SNED1Q8TER0 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.06□□□□□ -1.92
SNED1Q8TER0 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SNED1Q8TER0 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.05□□□□□ -1.92
SNED1Q8TER0 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SNED1Q8TER0 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SNED1Q8TER0 RNU6-845P-201ENST00000362578 103 ntBASIC3.05□□□□□ -1.92
SNED1Q8TER0 SNORA63-201ENST00000363450 132 ntBASIC3.05□□□□□ -1.92
SNED1Q8TER0 RNU6-767P-201ENST00000384132 107 ntBASIC3.05□□□□□ -1.92
SNED1Q8TER0 RNU6-692P-201ENST00000384496 107 ntBASIC3.05□□□□□ -1.92
SNED1Q8TER0 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SNED1Q8TER0 RNU6-908P-201ENST00000410160 94 ntBASIC3.05□□□□□ -1.92
SNED1Q8TER0 TPMTP2-201ENST00000414372 726 ntBASIC3.05□□□□□ -1.92
SNED1Q8TER0 SNRPEP10-201ENST00000420249 274 ntBASIC3.05□□□□□ -1.92
SNED1Q8TER0 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.05□□□□□ -1.92
SNED1Q8TER0 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.05□□□□□ -1.92
SNED1Q8TER0 AL591806.2-201ENST00000433122 173 ntBASIC3.05□□□□□ -1.92
SNED1Q8TER0 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.05□□□□□ -1.92
SNED1Q8TER0 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.05□□□□□ -1.92
SNED1Q8TER0 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.05□□□□□ -1.92
SNED1Q8TER0 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.05□□□□□ -1.92
SNED1Q8TER0 AC104058.1-201ENST00000448028 297 ntBASIC3.05□□□□□ -1.92
SNED1Q8TER0 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.05□□□□□ -1.92
SNED1Q8TER0 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.05□□□□□ -1.92
SNED1Q8TER0 MTCO3P2-201ENST00000457365 171 ntBASIC3.05□□□□□ -1.92
SNED1Q8TER0 RNU6-420P-201ENST00000458780 107 ntBASIC3.05□□□□□ -1.92
SNED1Q8TER0 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.05□□□□□ -1.92
SNED1Q8TER0 RN7SL297P-201ENST00000483161 293 ntBASIC3.05□□□□□ -1.92
SNED1Q8TER0 RPL39P36-201ENST00000490784 156 ntBASIC3.05□□□□□ -1.92
SNED1Q8TER0 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.05□□□□□ -1.92
SNED1Q8TER0 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.05□□□□□ -1.92
SNED1Q8TER0 HMGN1P13-201ENST00000505795 138 ntBASIC3.05□□□□□ -1.92
SNED1Q8TER0 Vault.3-201ENST00000516676 95 ntBASIC3.05□□□□□ -1.92
SNED1Q8TER0 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.05□□□□□ -1.92
SNED1Q8TER0 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.05□□□□□ -1.92
SNED1Q8TER0 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.05□□□□□ -1.92
SNED1Q8TER0 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SNED1Q8TER0 AC128657.1-201ENST00000549459 145 ntBASIC3.05□□□□□ -1.92
SNED1Q8TER0 SUB1P2-201ENST00000556401 297 ntBASIC3.05□□□□□ -1.92
SNED1Q8TER0 AC013553.2-201ENST00000604244 589 ntBASIC3.05□□□□□ -1.92
SNED1Q8TER0 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.05□□□□□ -1.92
SNED1Q8TER0 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.05□□□□□ -1.92
SNED1Q8TER0 AC107871.2-201ENST00000612894 502 ntBASIC3.05□□□□□ -1.92
SNED1Q8TER0 AC006504.8-201ENST00000621046 635 ntBASIC3.05□□□□□ -1.92
SNED1Q8TER0 U6.101-201ENST00000637707 76 ntBASIC3.05□□□□□ -1.92
SNED1Q8TER0 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
SNED1Q8TER0 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SNED1Q8TER0 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.05□□□□□ -1.92
SNED1Q8TER0 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SNED1Q8TER0 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.05□□□□□ -1.92
SNED1Q8TER0 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SNED1Q8TER0 Y_RNA.72-201ENST00000362894 103 ntBASIC3.04□□□□□ -1.92
SNED1Q8TER0 Y_RNA.159-201ENST00000363674 87 ntBASIC3.04□□□□□ -1.92
SNED1Q8TER0 Y_RNA.162-201ENST00000363683 102 ntBASIC3.04□□□□□ -1.92
SNED1Q8TER0 RNY3P3-201ENST00000363816 102 ntBASIC3.04□□□□□ -1.92
SNED1Q8TER0 Y_RNA.238-201ENST00000364441 102 ntBASIC3.04□□□□□ -1.92
SNED1Q8TER0 Y_RNA.381-201ENST00000365666 102 ntBASIC3.04□□□□□ -1.92
SNED1Q8TER0 RNU6-456P-201ENST00000384493 107 ntBASIC3.04□□□□□ -1.92
SNED1Q8TER0 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.04□□□□□ -1.92
SNED1Q8TER0 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.04□□□□□ -1.92
SNED1Q8TER0 AL590004.1-201ENST00000405321 300 ntBASIC3.04□□□□□ -1.92
SNED1Q8TER0 AL591034.1-201ENST00000407447 340 ntBASIC3.04□□□□□ -1.92
SNED1Q8TER0 AC099677.1-201ENST00000420575 175 ntBASIC3.04□□□□□ -1.92
SNED1Q8TER0 AC244505.4-201ENST00000434905 287 ntBASIC3.04□□□□□ -1.92
SNED1Q8TER0 SNRPEP4-201ENST00000435815 279 ntBASIC3.04□□□□□ -1.92
SNED1Q8TER0 SSXP5-201ENST00000443473 287 ntBASIC3.04□□□□□ -1.92
SNED1Q8TER0 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.04□□□□□ -1.92
SNED1Q8TER0 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.04□□□□□ -1.92
SNED1Q8TER0 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.04□□□□□ -1.92
SNED1Q8TER0 AC104986.1-201ENST00000517978 436 ntBASIC3.04□□□□□ -1.92
SNED1Q8TER0 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.04□□□□□ -1.92
SNED1Q8TER0 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.04□□□□□ -1.92
SNED1Q8TER0 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.04□□□□□ -1.92
SNED1Q8TER0 DEFB122-202ENST00000569013 197 ntBASIC3.04□□□□□ -1.92
SNED1Q8TER0 BBIP1P1-201ENST00000602999 279 ntBASIC3.04□□□□□ -1.92
SNED1Q8TER0 YWHAEP7-203ENST00000622054 312 ntBASIC3.04□□□□□ -1.92
SNED1Q8TER0 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.04□□□□□ -1.92
SNED1Q8TER0 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SNED1Q8TER0 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SNED1Q8TER0 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
SNED1Q8TER0 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
SNED1Q8TER0 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SNED1Q8TER0 Y_RNA.46-201ENST00000362695 102 ntBASIC3.03□□□□□ -1.92
SNED1Q8TER0 SNORD114-1-201ENST00000362705 72 ntBASIC3.03□□□□□ -1.92
SNED1Q8TER0 RNU4-79P-201ENST00000362764 141 ntBASIC3.03□□□□□ -1.92
SNED1Q8TER0 SNORD114-30-201ENST00000364448 72 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms