Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 RNU6-28P-201ENST00000362378 107 ntBASIC4.15□□□□□ -1.75
SH3RF3Q8TEJ3 RNA5SP322-201ENST00000363617 119 ntBASIC4.15□□□□□ -1.75
SH3RF3Q8TEJ3 RNU6-770P-201ENST00000363929 105 ntBASIC4.15□□□□□ -1.75
SH3RF3Q8TEJ3 U3.11-201ENST00000364476 212 ntBASIC4.15□□□□□ -1.75
SH3RF3Q8TEJ3 Y_RNA.288-201ENST00000364854 92 ntBASIC4.15□□□□□ -1.75
SH3RF3Q8TEJ3 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
SH3RF3Q8TEJ3 MT-TC-201ENST00000387405 66 ntBASIC4.15□□□□□ -1.75
SH3RF3Q8TEJ3 RNU6-837P-201ENST00000391056 108 ntBASIC4.15□□□□□ -1.75
SH3RF3Q8TEJ3 AL023807.1-201ENST00000407932 359 ntBASIC4.15□□□□□ -1.75
SH3RF3Q8TEJ3 RNA5SP120-201ENST00000410900 112 ntBASIC4.15□□□□□ -1.75
SH3RF3Q8TEJ3 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.15□□□□□ -1.75
SH3RF3Q8TEJ3 PGBD4P6-201ENST00000421501 610 ntBASIC4.15□□□□□ -1.75
SH3RF3Q8TEJ3 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.15□□□□□ -1.75
SH3RF3Q8TEJ3 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.15□□□□□ -1.75
SH3RF3Q8TEJ3 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.15□□□□□ -1.75
SH3RF3Q8TEJ3 ANP32BP2-201ENST00000454525 545 ntBASIC4.15□□□□□ -1.75
SH3RF3Q8TEJ3 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC4.15□□□□□ -1.75
SH3RF3Q8TEJ3 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.15□□□□□ -1.75
SH3RF3Q8TEJ3 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.15□□□□□ -1.75
SH3RF3Q8TEJ3 AC078918.1-201ENST00000498515 228 ntBASIC4.15□□□□□ -1.75
SH3RF3Q8TEJ3 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.15□□□□□ -1.75
SH3RF3Q8TEJ3 AC116337.1-201ENST00000509680 687 ntBASIC4.15□□□□□ -1.75
SH3RF3Q8TEJ3 AC025465.3-201ENST00000510570 311 ntBASIC4.15□□□□□ -1.75
SH3RF3Q8TEJ3 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.15□□□□□ -1.75
SH3RF3Q8TEJ3 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.15□□□□□ -1.75
SH3RF3Q8TEJ3 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.15□□□□□ -1.75
SH3RF3Q8TEJ3 AP003385.6-201ENST00000531603 374 ntBASIC4.15□□□□□ -1.75
SH3RF3Q8TEJ3 AP004242.1-201ENST00000533701 349 ntBASIC4.15□□□□□ -1.75
SH3RF3Q8TEJ3 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.15□□□□□ -1.75
SH3RF3Q8TEJ3 MIR5195-201ENST00000583555 115 ntBASIC4.15□□□□□ -1.75
SH3RF3Q8TEJ3 AC125232.2-201ENST00000592457 143 ntBASIC4.15□□□□□ -1.75
SH3RF3Q8TEJ3 AC092447.9-201ENST00000603395 144 ntBASIC4.15□□□□□ -1.75
SH3RF3Q8TEJ3 AC025946.2-201ENST00000603398 234 ntBASIC4.15□□□□□ -1.75
SH3RF3Q8TEJ3 MIR486-1-201ENST00000612171 68 ntBASIC4.15□□□□□ -1.75
SH3RF3Q8TEJ3 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.15□□□□□ -1.75
SH3RF3Q8TEJ3 AC103705.1-201ENST00000619013 241 ntBASIC4.15□□□□□ -1.75
SH3RF3Q8TEJ3 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.15□□□□□ -1.75
SH3RF3Q8TEJ3 MIR3651-201ENST00000630427 90 ntBASIC4.15□□□□□ -1.75
SH3RF3Q8TEJ3 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SH3RF3Q8TEJ3 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SH3RF3Q8TEJ3 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.15□□□□□ -1.75
SH3RF3Q8TEJ3 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SH3RF3Q8TEJ3 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.15□□□□□ -1.75
SH3RF3Q8TEJ3 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SH3RF3Q8TEJ3 AC010615.1-201ENST00000594254 1764 ntBASIC4.14□□□□□ -1.75
SH3RF3Q8TEJ3 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SH3RF3Q8TEJ3 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
SH3RF3Q8TEJ3 NCAPGP1-201ENST00000505112 1814 ntBASIC4.14□□□□□ -1.75
SH3RF3Q8TEJ3 AC011460.1-201ENST00000636268 1834 ntBASIC4.14□□□□□ -1.75
SH3RF3Q8TEJ3 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SH3RF3Q8TEJ3 Y_RNA.234-201ENST00000364409 97 ntBASIC4.14□□□□□ -1.75
SH3RF3Q8TEJ3 RNA5SP189-201ENST00000364920 115 ntBASIC4.14□□□□□ -1.75
SH3RF3Q8TEJ3 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SH3RF3Q8TEJ3 RNU1-89P-201ENST00000384592 164 ntBASIC4.14□□□□□ -1.75
SH3RF3Q8TEJ3 MIR19A-201ENST00000384878 82 ntBASIC4.14□□□□□ -1.75
SH3RF3Q8TEJ3 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SH3RF3Q8TEJ3 AL391417.1-201ENST00000404100 426 ntBASIC4.14□□□□□ -1.75
SH3RF3Q8TEJ3 Y_RNA.594-201ENST00000410373 140 ntBASIC4.14□□□□□ -1.75
SH3RF3Q8TEJ3 RNU6-1050P-201ENST00000410388 107 ntBASIC4.14□□□□□ -1.75
SH3RF3Q8TEJ3 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.14□□□□□ -1.75
SH3RF3Q8TEJ3 AC243428.1-201ENST00000421099 264 ntBASIC4.14□□□□□ -1.75
SH3RF3Q8TEJ3 AL590233.1-201ENST00000430017 456 ntBASIC4.14□□□□□ -1.75
SH3RF3Q8TEJ3 RPL23AP50-201ENST00000434149 455 ntBASIC4.14□□□□□ -1.75
SH3RF3Q8TEJ3 AC112492.4-201ENST00000456549 352 ntBASIC4.14□□□□□ -1.75
SH3RF3Q8TEJ3 RN7SL594P-201ENST00000470590 287 ntBASIC4.14□□□□□ -1.75
SH3RF3Q8TEJ3 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.14□□□□□ -1.75
SH3RF3Q8TEJ3 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SH3RF3Q8TEJ3 AC005921.1-201ENST00000510589 286 ntBASIC4.14□□□□□ -1.75
SH3RF3Q8TEJ3 RNU6-475P-201ENST00000516073 104 ntBASIC4.14□□□□□ -1.75
SH3RF3Q8TEJ3 RNU6-1023P-201ENST00000516137 106 ntBASIC4.14□□□□□ -1.75
SH3RF3Q8TEJ3 AC131281.1-201ENST00000522984 164 ntBASIC4.14□□□□□ -1.75
SH3RF3Q8TEJ3 AC022080.3-201ENST00000544433 482 ntBASIC4.14□□□□□ -1.75
SH3RF3Q8TEJ3 RRN3P3-201ENST00000549207 578 ntBASIC4.14□□□□□ -1.75
SH3RF3Q8TEJ3 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.14□□□□□ -1.75
SH3RF3Q8TEJ3 MIR6128-201ENST00000615528 109 ntBASIC4.14□□□□□ -1.75
SH3RF3Q8TEJ3 AC010378.1-201ENST00000619270 362 ntBASIC4.14□□□□□ -1.75
SH3RF3Q8TEJ3 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.14□□□□□ -1.75
SH3RF3Q8TEJ3 AC009902.3-201ENST00000606235 2172 ntBASIC4.14□□□□□ -1.75
SH3RF3Q8TEJ3 AL359893.1-201ENST00000447628 1580 ntBASIC4.14□□□□□ -1.75
SH3RF3Q8TEJ3 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.14□□□□□ -1.75
SH3RF3Q8TEJ3 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SH3RF3Q8TEJ3 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SH3RF3Q8TEJ3 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.13□□□□□ -1.75
SH3RF3Q8TEJ3 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SH3RF3Q8TEJ3 AL356274.2-201ENST00000624379 3752 ntBASIC4.13□□□□□ -1.75
SH3RF3Q8TEJ3 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SH3RF3Q8TEJ3 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.13□□□□□ -1.75
SH3RF3Q8TEJ3 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
SH3RF3Q8TEJ3 RNU5A-8P-201ENST00000364102 114 ntBASIC4.13□□□□□ -1.75
SH3RF3Q8TEJ3 Y_RNA.210-201ENST00000364161 110 ntBASIC4.13□□□□□ -1.75
SH3RF3Q8TEJ3 Y_RNA.222-201ENST00000364264 102 ntBASIC4.13□□□□□ -1.75
SH3RF3Q8TEJ3 RNVU1-3-201ENST00000364313 161 ntBASIC4.13□□□□□ -1.75
SH3RF3Q8TEJ3 RNU6-283P-201ENST00000364788 107 ntBASIC4.13□□□□□ -1.75
SH3RF3Q8TEJ3 SNORD115-7-201ENST00000365306 82 ntBASIC4.13□□□□□ -1.75
SH3RF3Q8TEJ3 Y_RNA.562-201ENST00000384695 113 ntBASIC4.13□□□□□ -1.75
SH3RF3Q8TEJ3 U3.20-201ENST00000390909 217 ntBASIC4.13□□□□□ -1.75
SH3RF3Q8TEJ3 RPS15AP10-201ENST00000432472 382 ntBASIC4.13□□□□□ -1.75
SH3RF3Q8TEJ3 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC4.13□□□□□ -1.75
SH3RF3Q8TEJ3 OSTCP8-201ENST00000445117 448 ntBASIC4.13□□□□□ -1.75
SH3RF3Q8TEJ3 RNU6-138P-201ENST00000515952 107 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 152.1 ms