Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.18□□□□□ -1.74
SMC1BQ8NDV3 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SMC1BQ8NDV3 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.18□□□□□ -1.74
SMC1BQ8NDV3 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SMC1BQ8NDV3 RNU6-45P-201ENST00000384471 107 ntBASIC4.18□□□□□ -1.74
SMC1BQ8NDV3 AL139397.2-201ENST00000404529 772 ntBASIC4.18□□□□□ -1.74
SMC1BQ8NDV3 Z85995.1-201ENST00000415547 335 ntBASIC4.18□□□□□ -1.74
SMC1BQ8NDV3 RPLP0P7-201ENST00000416050 667 ntBASIC4.18□□□□□ -1.74
SMC1BQ8NDV3 AL669831.1-202ENST00000428504 417 ntBASIC4.18□□□□□ -1.74
SMC1BQ8NDV3 AC007919.1-201ENST00000429380 217 ntBASIC4.18□□□□□ -1.74
SMC1BQ8NDV3 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.18□□□□□ -1.74
SMC1BQ8NDV3 ATP5HP2-201ENST00000433885 485 ntBASIC4.18□□□□□ -1.74
SMC1BQ8NDV3 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.18□□□□□ -1.74
SMC1BQ8NDV3 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.18□□□□□ -1.74
SMC1BQ8NDV3 GTF2IP13-201ENST00000438487 386 ntBASIC4.18□□□□□ -1.74
SMC1BQ8NDV3 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.18□□□□□ -1.74
SMC1BQ8NDV3 VN1R17P-201ENST00000472048 1090 ntBASIC4.18□□□□□ -1.74
SMC1BQ8NDV3 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.18□□□□□ -1.74
SMC1BQ8NDV3 MTCO1P29-201ENST00000496868 288 ntBASIC4.18□□□□□ -1.74
SMC1BQ8NDV3 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SMC1BQ8NDV3 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.18□□□□□ -1.74
SMC1BQ8NDV3 AC090115.3-201ENST00000553218 849 ntBASIC4.18□□□□□ -1.74
SMC1BQ8NDV3 MTCO3P23-201ENST00000561363 289 ntBASIC4.18□□□□□ -1.74
SMC1BQ8NDV3 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.18□□□□□ -1.74
SMC1BQ8NDV3 MIR548AC-201ENST00000585049 88 ntBASIC4.18□□□□□ -1.74
SMC1BQ8NDV3 ATP1B3P1-201ENST00000605365 821 ntBASIC4.18□□□□□ -1.74
SMC1BQ8NDV3 AC090132.2-201ENST00000615881 347 ntBASIC4.18□□□□□ -1.74
SMC1BQ8NDV3 Z99571.1-201ENST00000636677 394 ntBASIC4.18□□□□□ -1.74
SMC1BQ8NDV3 AL773545.4-201ENST00000637262 310 ntBASIC4.18□□□□□ -1.74
SMC1BQ8NDV3 AL513478.4-201ENST00000641636 310 ntBASIC4.18□□□□□ -1.74
SMC1BQ8NDV3 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SMC1BQ8NDV3 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SMC1BQ8NDV3 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SMC1BQ8NDV3 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.18□□□□□ -1.74
SMC1BQ8NDV3 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SMC1BQ8NDV3 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
SMC1BQ8NDV3 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
SMC1BQ8NDV3 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
SMC1BQ8NDV3 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SMC1BQ8NDV3 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.17□□□□□ -1.74
SMC1BQ8NDV3 Y_RNA.184-201ENST00000363884 108 ntBASIC4.17□□□□□ -1.74
SMC1BQ8NDV3 Y_RNA.245-201ENST00000364493 95 ntBASIC4.17□□□□□ -1.74
SMC1BQ8NDV3 Y_RNA.813-201ENST00000364639 102 ntBASIC4.17□□□□□ -1.74
SMC1BQ8NDV3 RPS4XP7-201ENST00000406274 780 ntBASIC4.17□□□□□ -1.74
SMC1BQ8NDV3 RN7SKP111-201ENST00000410349 271 ntBASIC4.17□□□□□ -1.74
SMC1BQ8NDV3 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SMC1BQ8NDV3 RPS20P15-201ENST00000412792 311 ntBASIC4.17□□□□□ -1.74
SMC1BQ8NDV3 AC063979.1-201ENST00000415539 377 ntBASIC4.17□□□□□ -1.74
SMC1BQ8NDV3 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.17□□□□□ -1.74
SMC1BQ8NDV3 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.17□□□□□ -1.74
SMC1BQ8NDV3 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.17□□□□□ -1.74
SMC1BQ8NDV3 RNA5SP290-201ENST00000517133 127 ntBASIC4.17□□□□□ -1.74
SMC1BQ8NDV3 AP000889.2-201ENST00000532684 490 ntBASIC4.17□□□□□ -1.74
SMC1BQ8NDV3 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.17□□□□□ -1.74
SMC1BQ8NDV3 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.17□□□□□ -1.74
SMC1BQ8NDV3 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.17□□□□□ -1.74
SMC1BQ8NDV3 MIR3690-201ENST00000580266 75 ntBASIC4.17□□□□□ -1.74
SMC1BQ8NDV3 MIR4435-1-201ENST00000582552 80 ntBASIC4.17□□□□□ -1.74
SMC1BQ8NDV3 uc_338.15-201ENST00000615470 191 ntBASIC4.17□□□□□ -1.74
SMC1BQ8NDV3 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC4.17□□□□□ -1.74
SMC1BQ8NDV3 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.17□□□□□ -1.74
SMC1BQ8NDV3 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
SMC1BQ8NDV3 RPS4XP5-202ENST00000449995 1334 ntBASIC4.17□□□□□ -1.74
SMC1BQ8NDV3 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SMC1BQ8NDV3 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SMC1BQ8NDV3 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.16□□□□□ -1.74
SMC1BQ8NDV3 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.16□□□□□ -1.74
SMC1BQ8NDV3 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
SMC1BQ8NDV3 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SMC1BQ8NDV3 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SMC1BQ8NDV3 RNU6-1252P-201ENST00000363054 104 ntBASIC4.16□□□□□ -1.74
SMC1BQ8NDV3 RNU4-76P-201ENST00000364509 141 ntBASIC4.16□□□□□ -1.74
SMC1BQ8NDV3 Y_RNA.384-201ENST00000383909 102 ntBASIC4.16□□□□□ -1.74
SMC1BQ8NDV3 RNU2-33P-201ENST00000410344 192 ntBASIC4.16□□□□□ -1.74
SMC1BQ8NDV3 GPM6BP2-201ENST00000432046 144 ntBASIC4.16□□□□□ -1.74
SMC1BQ8NDV3 AC009237.8-201ENST00000445492 379 ntBASIC4.16□□□□□ -1.74
SMC1BQ8NDV3 GPM6BP1-201ENST00000446387 144 ntBASIC4.16□□□□□ -1.74
SMC1BQ8NDV3 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.16□□□□□ -1.74
SMC1BQ8NDV3 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.16□□□□□ -1.74
SMC1BQ8NDV3 ANP32BP2-201ENST00000454525 545 ntBASIC4.16□□□□□ -1.74
SMC1BQ8NDV3 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.16□□□□□ -1.74
SMC1BQ8NDV3 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.16□□□□□ -1.74
SMC1BQ8NDV3 FCF1P8-201ENST00000510322 597 ntBASIC4.16□□□□□ -1.74
SMC1BQ8NDV3 TBCAP3-201ENST00000512475 312 ntBASIC4.16□□□□□ -1.74
SMC1BQ8NDV3 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.16□□□□□ -1.74
SMC1BQ8NDV3 RNA5SP356-201ENST00000515972 94 ntBASIC4.16□□□□□ -1.74
SMC1BQ8NDV3 SNORA14.1-201ENST00000516113 141 ntBASIC4.16□□□□□ -1.74
SMC1BQ8NDV3 RNA5SP309-201ENST00000516670 106 ntBASIC4.16□□□□□ -1.74
SMC1BQ8NDV3 RNU6-1315P-201ENST00000517187 99 ntBASIC4.16□□□□□ -1.74
SMC1BQ8NDV3 AP002404.1-201ENST00000532005 451 ntBASIC4.16□□□□□ -1.74
SMC1BQ8NDV3 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.16□□□□□ -1.74
SMC1BQ8NDV3 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC4.16□□□□□ -1.74
SMC1BQ8NDV3 AL355375.2-201ENST00000574825 175 ntBASIC4.16□□□□□ -1.74
SMC1BQ8NDV3 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.16□□□□□ -1.74
SMC1BQ8NDV3 DUSP12P1-201ENST00000612874 516 ntBASIC4.16□□□□□ -1.74
SMC1BQ8NDV3 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.16□□□□□ -1.74
SMC1BQ8NDV3 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.16□□□□□ -1.74
SMC1BQ8NDV3 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.16□□□□□ -1.74
SMC1BQ8NDV3 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SMC1BQ8NDV3 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms