Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 MTND1P18-201ENST00000448191 573 ntBASIC3.39□□□□□ -1.87
USP38Q8NB14 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.39□□□□□ -1.87
USP38Q8NB14 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.39□□□□□ -1.87
USP38Q8NB14 AC233702.1-201ENST00000482905 502 ntBASIC3.39□□□□□ -1.87
USP38Q8NB14 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.39□□□□□ -1.87
USP38Q8NB14 AMZ2P1-203ENST00000565833 850 ntBASIC3.39□□□□□ -1.87
USP38Q8NB14 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
USP38Q8NB14 MIR4775-201ENST00000581168 75 ntBASIC3.39□□□□□ -1.87
USP38Q8NB14 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
USP38Q8NB14 AC008521.1-201ENST00000587471 187 ntBASIC3.39□□□□□ -1.87
USP38Q8NB14 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.39□□□□□ -1.87
USP38Q8NB14 MTND4LP5-201ENST00000605152 292 ntBASIC3.39□□□□□ -1.87
USP38Q8NB14 AC126118.1-201ENST00000607744 628 ntBASIC3.39□□□□□ -1.87
USP38Q8NB14 FTX_3.1-201ENST00000610451 147 ntBASIC3.39□□□□□ -1.87
USP38Q8NB14 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.39□□□□□ -1.87
USP38Q8NB14 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
USP38Q8NB14 AL354950.2-201ENST00000617939 290 ntBASIC3.39□□□□□ -1.87
USP38Q8NB14 AC068792.1-201ENST00000621354 417 ntBASIC3.39□□□□□ -1.87
USP38Q8NB14 AL359880.1-201ENST00000621879 266 ntBASIC3.39□□□□□ -1.87
USP38Q8NB14 AC011155.2-201ENST00000623202 216 ntBASIC3.39□□□□□ -1.87
USP38Q8NB14 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
USP38Q8NB14 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.39□□□□□ -1.87
USP38Q8NB14 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
USP38Q8NB14 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
USP38Q8NB14 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
USP38Q8NB14 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
USP38Q8NB14 MIR22-201ENST00000362190 85 ntBASIC3.38□□□□□ -1.87
USP38Q8NB14 RNU6-884P-201ENST00000363889 107 ntBASIC3.38□□□□□ -1.87
USP38Q8NB14 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
USP38Q8NB14 RNU6-780P-201ENST00000391030 104 ntBASIC3.38□□□□□ -1.87
USP38Q8NB14 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.38□□□□□ -1.87
USP38Q8NB14 Y_RNA.619-201ENST00000410951 90 ntBASIC3.38□□□□□ -1.87
USP38Q8NB14 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.38□□□□□ -1.87
USP38Q8NB14 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.38□□□□□ -1.87
USP38Q8NB14 MRPL50P2-201ENST00000416821 482 ntBASIC3.38□□□□□ -1.87
USP38Q8NB14 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.38□□□□□ -1.87
USP38Q8NB14 C8orf59P1-201ENST00000429930 303 ntBASIC3.38□□□□□ -1.87
USP38Q8NB14 AL603825.1-201ENST00000438481 80 ntBASIC3.38□□□□□ -1.87
USP38Q8NB14 AC009969.1-201ENST00000438726 172 ntBASIC3.38□□□□□ -1.87
USP38Q8NB14 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.38□□□□□ -1.87
USP38Q8NB14 UQCRHP3-201ENST00000451503 251 ntBASIC3.38□□□□□ -1.87
USP38Q8NB14 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.38□□□□□ -1.87
USP38Q8NB14 FABP5P15-201ENST00000453566 214 ntBASIC3.38□□□□□ -1.87
USP38Q8NB14 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.38□□□□□ -1.87
USP38Q8NB14 AC139453.3-201ENST00000493276 369 ntBASIC3.38□□□□□ -1.87
USP38Q8NB14 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.38□□□□□ -1.87
USP38Q8NB14 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.38□□□□□ -1.87
USP38Q8NB14 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.38□□□□□ -1.87
USP38Q8NB14 AL512360.1-201ENST00000555346 234 ntBASIC3.38□□□□□ -1.87
USP38Q8NB14 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.38□□□□□ -1.87
USP38Q8NB14 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.38□□□□□ -1.87
USP38Q8NB14 AC008752.3-201ENST00000588113 712 ntBASIC3.38□□□□□ -1.87
USP38Q8NB14 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.38□□□□□ -1.87
USP38Q8NB14 AL021997.1-201ENST00000605757 193 ntBASIC3.38□□□□□ -1.87
USP38Q8NB14 AL138880.2-201ENST00000616214 239 ntBASIC3.38□□□□□ -1.87
USP38Q8NB14 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
USP38Q8NB14 AC068137.3-201ENST00000639191 341 ntBASIC3.38□□□□□ -1.87
USP38Q8NB14 AC073869.6-201ENST00000640656 341 ntBASIC3.38□□□□□ -1.87
USP38Q8NB14 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.38□□□□□ -1.87
USP38Q8NB14 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
USP38Q8NB14 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
USP38Q8NB14 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.38□□□□□ -1.87
USP38Q8NB14 AC103710.2-202ENST00000641454 2853 ntBASIC3.37□□□□□ -1.87
USP38Q8NB14 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.37□□□□□ -1.87
USP38Q8NB14 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
USP38Q8NB14 RNU6-198P-201ENST00000384258 104 ntBASIC3.37□□□□□ -1.87
USP38Q8NB14 RNU6-606P-201ENST00000384721 111 ntBASIC3.37□□□□□ -1.87
USP38Q8NB14 MIR301A-201ENST00000385261 86 ntBASIC3.37□□□□□ -1.87
USP38Q8NB14 RNU6-387P-201ENST00000411331 105 ntBASIC3.37□□□□□ -1.87
USP38Q8NB14 AC245054.2-201ENST00000415639 319 ntBASIC3.37□□□□□ -1.87
USP38Q8NB14 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.37□□□□□ -1.87
USP38Q8NB14 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.37□□□□□ -1.87
USP38Q8NB14 AL606489.2-201ENST00000433886 234 ntBASIC3.37□□□□□ -1.87
USP38Q8NB14 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.37□□□□□ -1.87
USP38Q8NB14 DPPA3P1-201ENST00000448050 469 ntBASIC3.37□□□□□ -1.87
USP38Q8NB14 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.37□□□□□ -1.87
USP38Q8NB14 RN7SL283P-201ENST00000489055 303 ntBASIC3.37□□□□□ -1.87
USP38Q8NB14 SUMO2P6-201ENST00000505273 288 ntBASIC3.37□□□□□ -1.87
USP38Q8NB14 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.37□□□□□ -1.87
USP38Q8NB14 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.37□□□□□ -1.87
USP38Q8NB14 AC008413.1-201ENST00000511864 177 ntBASIC3.37□□□□□ -1.87
USP38Q8NB14 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.37□□□□□ -1.87
USP38Q8NB14 Y_RNA.704-201ENST00000516851 102 ntBASIC3.37□□□□□ -1.87
USP38Q8NB14 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.37□□□□□ -1.87
USP38Q8NB14 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.37□□□□□ -1.87
USP38Q8NB14 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.37□□□□□ -1.87
USP38Q8NB14 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.37□□□□□ -1.87
USP38Q8NB14 AC080078.2-201ENST00000603766 501 ntBASIC3.37□□□□□ -1.87
USP38Q8NB14 AL035413.2-201ENST00000604801 525 ntBASIC3.37□□□□□ -1.87
USP38Q8NB14 AC092954.2-201ENST00000609103 430 ntBASIC3.37□□□□□ -1.87
USP38Q8NB14 AL161629.2-201ENST00000615347 275 ntBASIC3.37□□□□□ -1.87
USP38Q8NB14 AC024940.5-201ENST00000622889 474 ntBASIC3.37□□□□□ -1.87
USP38Q8NB14 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.37□□□□□ -1.87
USP38Q8NB14 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
USP38Q8NB14 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
USP38Q8NB14 AC022336.2-201ENST00000568966 2538 ntBASIC3.36□□□□□ -1.87
USP38Q8NB14 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
USP38Q8NB14 DYNLT3P1-201ENST00000378574 347 ntBASIC3.36□□□□□ -1.87
USP38Q8NB14 RNU6-851P-201ENST00000384565 107 ntBASIC3.36□□□□□ -1.87
USP38Q8NB14 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms