Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 FCF1P9-201ENST00000412546 282 ntBASIC2.87□□□□□ -1.95
CPSF7Q8N684 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.87□□□□□ -1.95
CPSF7Q8N684 MRPL50P2-201ENST00000416821 482 ntBASIC2.87□□□□□ -1.95
CPSF7Q8N684 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.87□□□□□ -1.95
CPSF7Q8N684 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.87□□□□□ -1.95
CPSF7Q8N684 C8orf59P1-201ENST00000429930 303 ntBASIC2.87□□□□□ -1.95
CPSF7Q8N684 RPL36AP53-201ENST00000432891 316 ntBASIC2.87□□□□□ -1.95
CPSF7Q8N684 AL606489.2-201ENST00000433886 234 ntBASIC2.87□□□□□ -1.95
CPSF7Q8N684 MTND1P4-201ENST00000435196 415 ntBASIC2.87□□□□□ -1.95
CPSF7Q8N684 SNRPEP9-201ENST00000436794 238 ntBASIC2.87□□□□□ -1.95
CPSF7Q8N684 RPL7P54-201ENST00000438336 674 ntBASIC2.87□□□□□ -1.95
CPSF7Q8N684 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.87□□□□□ -1.95
CPSF7Q8N684 DPPA3P1-201ENST00000448050 469 ntBASIC2.87□□□□□ -1.95
CPSF7Q8N684 MTND1P18-201ENST00000448191 573 ntBASIC2.87□□□□□ -1.95
CPSF7Q8N684 RPL12P25-201ENST00000455592 494 ntBASIC2.87□□□□□ -1.95
CPSF7Q8N684 RPS15AP34-201ENST00000487776 387 ntBASIC2.87□□□□□ -1.95
CPSF7Q8N684 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.87□□□□□ -1.95
CPSF7Q8N684 RNA5SP165-201ENST00000517142 115 ntBASIC2.87□□□□□ -1.95
CPSF7Q8N684 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.87□□□□□ -1.95
CPSF7Q8N684 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.87□□□□□ -1.95
CPSF7Q8N684 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.87□□□□□ -1.95
CPSF7Q8N684 AP002404.1-201ENST00000532005 451 ntBASIC2.87□□□□□ -1.95
CPSF7Q8N684 AL512360.1-201ENST00000555346 234 ntBASIC2.87□□□□□ -1.95
CPSF7Q8N684 AC136619.2-201ENST00000563361 631 ntBASIC2.87□□□□□ -1.95
CPSF7Q8N684 HMGB1P33-201ENST00000563485 527 ntBASIC2.87□□□□□ -1.95
CPSF7Q8N684 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.87□□□□□ -1.95
CPSF7Q8N684 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.87□□□□□ -1.95
CPSF7Q8N684 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.87□□□□□ -1.95
CPSF7Q8N684 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CPSF7Q8N684 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.87□□□□□ -1.95
CPSF7Q8N684 AC008752.3-201ENST00000588113 712 ntBASIC2.87□□□□□ -1.95
CPSF7Q8N684 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.87□□□□□ -1.95
CPSF7Q8N684 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.87□□□□□ -1.95
CPSF7Q8N684 AC023043.3-201ENST00000593113 385 ntBASIC2.87□□□□□ -1.95
CPSF7Q8N684 MIR15A-201ENST00000607334 83 ntBASIC2.87□□□□□ -1.95
CPSF7Q8N684 AP001486.3-201ENST00000615334 372 ntBASIC2.87□□□□□ -1.95
CPSF7Q8N684 AL138880.2-201ENST00000616214 239 ntBASIC2.87□□□□□ -1.95
CPSF7Q8N684 U4.5-201ENST00000617137 123 ntBASIC2.87□□□□□ -1.95
CPSF7Q8N684 AC073308.1-201ENST00000623696 305 ntBASIC2.87□□□□□ -1.95
CPSF7Q8N684 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.87□□□□□ -1.95
CPSF7Q8N684 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
CPSF7Q8N684 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CPSF7Q8N684 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
CPSF7Q8N684 RNU6-270P-201ENST00000364131 105 ntBASIC2.86□□□□□ -1.95
CPSF7Q8N684 RNU6-1322P-201ENST00000364309 107 ntBASIC2.86□□□□□ -1.95
CPSF7Q8N684 Y_RNA.534-201ENST00000384599 112 ntBASIC2.86□□□□□ -1.95
CPSF7Q8N684 Y_RNA.554-201ENST00000384672 102 ntBASIC2.86□□□□□ -1.95
CPSF7Q8N684 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CPSF7Q8N684 RPL21P75-201ENST00000396599 483 ntBASIC2.86□□□□□ -1.95
CPSF7Q8N684 RPL21P28-201ENST00000401418 483 ntBASIC2.86□□□□□ -1.95
CPSF7Q8N684 AL592114.1-201ENST00000403842 483 ntBASIC2.86□□□□□ -1.95
CPSF7Q8N684 AL139095.1-201ENST00000404326 391 ntBASIC2.86□□□□□ -1.95
CPSF7Q8N684 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.86□□□□□ -1.95
CPSF7Q8N684 HMGN2P35-201ENST00000412164 270 ntBASIC2.86□□□□□ -1.95
CPSF7Q8N684 USP9YP6-201ENST00000413550 854 ntBASIC2.86□□□□□ -1.95
CPSF7Q8N684 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.86□□□□□ -1.95
CPSF7Q8N684 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CPSF7Q8N684 RPL35AP12-201ENST00000425362 338 ntBASIC2.86□□□□□ -1.95
CPSF7Q8N684 CALM2P2-201ENST00000428512 440 ntBASIC2.86□□□□□ -1.95
CPSF7Q8N684 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.86□□□□□ -1.95
CPSF7Q8N684 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.86□□□□□ -1.95
CPSF7Q8N684 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.86□□□□□ -1.95
CPSF7Q8N684 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.86□□□□□ -1.95
CPSF7Q8N684 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.86□□□□□ -1.95
CPSF7Q8N684 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.86□□□□□ -1.95
CPSF7Q8N684 RPL21P39-201ENST00000463605 483 ntBASIC2.86□□□□□ -1.95
CPSF7Q8N684 HMGN2P13-201ENST00000476476 274 ntBASIC2.86□□□□□ -1.95
CPSF7Q8N684 RPL21P93-201ENST00000480465 489 ntBASIC2.86□□□□□ -1.95
CPSF7Q8N684 AC233702.1-201ENST00000482905 502 ntBASIC2.86□□□□□ -1.95
CPSF7Q8N684 AC087190.1-201ENST00000484462 480 ntBASIC2.86□□□□□ -1.95
CPSF7Q8N684 AC093591.1-201ENST00000491435 481 ntBASIC2.86□□□□□ -1.95
CPSF7Q8N684 RPL21P16-201ENST00000495531 483 ntBASIC2.86□□□□□ -1.95
CPSF7Q8N684 AC105417.1-201ENST00000514691 285 ntBASIC2.86□□□□□ -1.95
CPSF7Q8N684 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.86□□□□□ -1.95
CPSF7Q8N684 SNORA31.1-201ENST00000515993 133 ntBASIC2.86□□□□□ -1.95
CPSF7Q8N684 SNORA31.5-201ENST00000516190 133 ntBASIC2.86□□□□□ -1.95
CPSF7Q8N684 Y_RNA.693-201ENST00000516641 110 ntBASIC2.86□□□□□ -1.95
CPSF7Q8N684 RNU6-685P-201ENST00000517088 95 ntBASIC2.86□□□□□ -1.95
CPSF7Q8N684 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.86□□□□□ -1.95
CPSF7Q8N684 AC009812.2-201ENST00000517657 457 ntBASIC2.86□□□□□ -1.95
CPSF7Q8N684 AC104383.1-201ENST00000530297 370 ntBASIC2.86□□□□□ -1.95
CPSF7Q8N684 AP000867.2-201ENST00000532468 320 ntBASIC2.86□□□□□ -1.95
CPSF7Q8N684 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.86□□□□□ -1.95
CPSF7Q8N684 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CPSF7Q8N684 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.86□□□□□ -1.95
CPSF7Q8N684 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.86□□□□□ -1.95
CPSF7Q8N684 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.86□□□□□ -1.95
CPSF7Q8N684 MTATP6P3-201ENST00000581686 676 ntBASIC2.86□□□□□ -1.95
CPSF7Q8N684 AP000787.2-201ENST00000604432 568 ntBASIC2.86□□□□□ -1.95
CPSF7Q8N684 AC007621.1-201ENST00000604544 437 ntBASIC2.86□□□□□ -1.95
CPSF7Q8N684 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.86□□□□□ -1.95
CPSF7Q8N684 AC126118.1-201ENST00000607744 628 ntBASIC2.86□□□□□ -1.95
CPSF7Q8N684 FTX_3.1-201ENST00000610451 147 ntBASIC2.86□□□□□ -1.95
CPSF7Q8N684 MIR7106-201ENST00000612419 65 ntBASIC2.86□□□□□ -1.95
CPSF7Q8N684 AL354950.2-201ENST00000617939 290 ntBASIC2.86□□□□□ -1.95
CPSF7Q8N684 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.86□□□□□ -1.95
CPSF7Q8N684 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.86□□□□□ -1.95
CPSF7Q8N684 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.86□□□□□ -1.95
CPSF7Q8N684 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CPSF7Q8N684 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms