Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 RNU6-37P-201ENST00000362692 107 ntBASIC0.91□□□□□ -2.26
VPS8Q8N3P4 RNU6-942P-201ENST00000363002 107 ntBASIC0.91□□□□□ -2.26
VPS8Q8N3P4 RNU6-11P-201ENST00000364234 107 ntBASIC0.91□□□□□ -2.26
VPS8Q8N3P4 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC0.91□□□□□ -2.26
VPS8Q8N3P4 AC024082.2-201ENST00000434771 238 ntBASIC0.91□□□□□ -2.26
VPS8Q8N3P4 ARPC3P5-201ENST00000448802 534 ntBASIC0.91□□□□□ -2.26
VPS8Q8N3P4 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
VPS8Q8N3P4 SNORA31.6-201ENST00000516241 130 ntBASIC0.91□□□□□ -2.26
VPS8Q8N3P4 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC0.91□□□□□ -2.26
VPS8Q8N3P4 AL356432.3-201ENST00000568952 465 ntBASIC0.91□□□□□ -2.26
VPS8Q8N3P4 AC007151.1-201ENST00000572774 483 ntBASIC0.91□□□□□ -2.26
VPS8Q8N3P4 AC105224.1-201ENST00000587055 421 ntBASIC0.91□□□□□ -2.26
VPS8Q8N3P4 AC010738.1-201ENST00000604970 987 ntBASIC0.91□□□□□ -2.26
VPS8Q8N3P4 AP000238.1-201ENST00000608759 426 ntBASIC0.91□□□□□ -2.26
VPS8Q8N3P4 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.91□□□□□ -2.26
VPS8Q8N3P4 AC007742.2-201ENST00000618226 398 ntBASIC0.91□□□□□ -2.26
VPS8Q8N3P4 RNU6-251P-201ENST00000363235 104 ntBASIC0.9□□□□□ -2.26
VPS8Q8N3P4 RNU6-748P-201ENST00000384648 107 ntBASIC0.9□□□□□ -2.26
VPS8Q8N3P4 EBAG9P1-201ENST00000418955 543 ntBASIC0.9□□□□□ -2.26
VPS8Q8N3P4 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.9□□□□□ -2.26
VPS8Q8N3P4 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.9□□□□□ -2.26
VPS8Q8N3P4 RPL39P28-201ENST00000465655 155 ntBASIC0.9□□□□□ -2.26
VPS8Q8N3P4 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.9□□□□□ -2.26
VPS8Q8N3P4 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.9□□□□□ -2.26
VPS8Q8N3P4 C1DP5-201ENST00000525775 383 ntBASIC0.9□□□□□ -2.26
VPS8Q8N3P4 PIGPP2-201ENST00000411569 458 ntBASIC0.89□□□□□ -2.27
VPS8Q8N3P4 AC092047.1-201ENST00000424997 240 ntBASIC0.89□□□□□ -2.27
VPS8Q8N3P4 AL035410.1-201ENST00000427409 427 ntBASIC0.89□□□□□ -2.27
VPS8Q8N3P4 AC005534.2-201ENST00000431047 433 ntBASIC0.89□□□□□ -2.27
VPS8Q8N3P4 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC0.89□□□□□ -2.27
VPS8Q8N3P4 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.89□□□□□ -2.27
VPS8Q8N3P4 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC0.89□□□□□ -2.27
VPS8Q8N3P4 RNU7-40P-201ENST00000516397 64 ntBASIC0.89□□□□□ -2.27
VPS8Q8N3P4 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.89□□□□□ -2.27
VPS8Q8N3P4 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.89□□□□□ -2.27
VPS8Q8N3P4 EEF1B2P4-201ENST00000551398 348 ntBASIC0.89□□□□□ -2.27
VPS8Q8N3P4 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
VPS8Q8N3P4 AC004817.2-201ENST00000561794 651 ntBASIC0.89□□□□□ -2.27
VPS8Q8N3P4 AC005786.1-201ENST00000588553 154 ntBASIC0.89□□□□□ -2.27
VPS8Q8N3P4 MTND4LP5-201ENST00000605152 292 ntBASIC0.89□□□□□ -2.27
VPS8Q8N3P4 HMGB1P51-201ENST00000605166 638 ntBASIC0.89□□□□□ -2.27
VPS8Q8N3P4 AC135803.1-201ENST00000608748 565 ntBASIC0.89□□□□□ -2.27
VPS8Q8N3P4 MIR5739-201ENST00000619803 80 ntBASIC0.89□□□□□ -2.27
VPS8Q8N3P4 U1.36-201ENST00000620684 176 ntBASIC0.89□□□□□ -2.27
VPS8Q8N3P4 AC090517.3-201ENST00000625170 141 ntBASIC0.89□□□□□ -2.27
VPS8Q8N3P4 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
VPS8Q8N3P4 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
VPS8Q8N3P4 HAUS6P2-201ENST00000433254 2404 ntBASIC0.89□□□□□ -2.27
VPS8Q8N3P4 RNU6-1222P-201ENST00000384615 107 ntBASIC0.89□□□□□ -2.27
VPS8Q8N3P4 FABP5P14-201ENST00000437273 393 ntBASIC0.89□□□□□ -2.27
VPS8Q8N3P4 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC0.89□□□□□ -2.27
VPS8Q8N3P4 AL590095.2-201ENST00000604136 117 ntBASIC0.89□□□□□ -2.27
VPS8Q8N3P4 BX322635.1-201ENST00000605804 496 ntBASIC0.89□□□□□ -2.27
VPS8Q8N3P4 AC087045.1-201ENST00000605856 382 ntBASIC0.89□□□□□ -2.27
VPS8Q8N3P4 AL121652.1-201ENST00000608851 448 ntBASIC0.89□□□□□ -2.27
VPS8Q8N3P4 ANKRD26P2-201ENST00000445530 1710 ntBASIC0.88□□□□□ -2.27
VPS8Q8N3P4 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.88□□□□□ -2.27
VPS8Q8N3P4 OR4G2P-201ENST00000328113 903 ntBASIC0.88□□□□□ -2.27
VPS8Q8N3P4 RNU6-441P-201ENST00000384545 106 ntBASIC0.88□□□□□ -2.27
VPS8Q8N3P4 RNU6-882P-201ENST00000391025 103 ntBASIC0.88□□□□□ -2.27
VPS8Q8N3P4 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
VPS8Q8N3P4 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC0.88□□□□□ -2.27
VPS8Q8N3P4 AL160275.3-201ENST00000423876 471 ntBASIC0.88□□□□□ -2.27
VPS8Q8N3P4 CR848007.2-201ENST00000424918 787 ntBASIC0.88□□□□□ -2.27
VPS8Q8N3P4 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC0.88□□□□□ -2.27
VPS8Q8N3P4 MED14P1-201ENST00000430517 648 ntBASIC0.88□□□□□ -2.27
VPS8Q8N3P4 AC092628.1-201ENST00000436250 252 ntBASIC0.88□□□□□ -2.27
VPS8Q8N3P4 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.88□□□□□ -2.27
VPS8Q8N3P4 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.88□□□□□ -2.27
VPS8Q8N3P4 AC009974.1-201ENST00000608881 455 ntBASIC0.88□□□□□ -2.27
VPS8Q8N3P4 ZNF663P-202ENST00000641770 1131 ntBASIC0.88□□□□□ -2.27
VPS8Q8N3P4 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC0.87□□□□□ -2.27
VPS8Q8N3P4 SNORA70.7-201ENST00000384159 133 ntBASIC0.87□□□□□ -2.27
VPS8Q8N3P4 AL355615.1-201ENST00000406187 641 ntBASIC0.87□□□□□ -2.27
VPS8Q8N3P4 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC0.87□□□□□ -2.27
VPS8Q8N3P4 AL161651.1-201ENST00000440882 223 ntBASIC0.87□□□□□ -2.27
VPS8Q8N3P4 DYNLT3P2-201ENST00000442517 295 ntBASIC0.87□□□□□ -2.27
VPS8Q8N3P4 AC112492.4-201ENST00000456549 352 ntBASIC0.87□□□□□ -2.27
VPS8Q8N3P4 RNU6-775P-201ENST00000459318 96 ntBASIC0.87□□□□□ -2.27
VPS8Q8N3P4 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.87□□□□□ -2.27
VPS8Q8N3P4 AC025857.1-201ENST00000525252 377 ntBASIC0.87□□□□□ -2.27
VPS8Q8N3P4 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC0.87□□□□□ -2.27
VPS8Q8N3P4 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC0.87□□□□□ -2.27
VPS8Q8N3P4 CYP4A27P-201ENST00000567218 190 ntBASIC0.87□□□□□ -2.27
VPS8Q8N3P4 AC015688.2-201ENST00000584523 262 ntBASIC0.87□□□□□ -2.27
VPS8Q8N3P4 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.87□□□□□ -2.27
VPS8Q8N3P4 AL589743.1-201ENST00000551932 2712 ntBASIC0.87□□□□□ -2.27
VPS8Q8N3P4 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC0.86□□□□□ -2.27
VPS8Q8N3P4 OR5T3-201ENST00000303059 1023 ntBASIC0.86□□□□□ -2.27
VPS8Q8N3P4 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
VPS8Q8N3P4 RNU6-1235P-201ENST00000384559 107 ntBASIC0.86□□□□□ -2.27
VPS8Q8N3P4 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.86□□□□□ -2.27
VPS8Q8N3P4 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.86□□□□□ -2.27
VPS8Q8N3P4 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.86□□□□□ -2.27
VPS8Q8N3P4 RNU6-498P-201ENST00000459468 107 ntBASIC0.86□□□□□ -2.27
VPS8Q8N3P4 AC067942.3-201ENST00000512025 362 ntBASIC0.86□□□□□ -2.27
VPS8Q8N3P4 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.86□□□□□ -2.27
VPS8Q8N3P4 AC138473.1-201ENST00000605717 526 ntBASIC0.86□□□□□ -2.27
VPS8Q8N3P4 AL589743.7-201ENST00000612637 233 ntBASIC0.86□□□□□ -2.27
VPS8Q8N3P4 AC243773.3-201ENST00000613270 256 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms