Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.22□□□□□ -2.05
CCDC50Q8IVM0 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.22□□□□□ -2.05
CCDC50Q8IVM0 SNORA25.11-201ENST00000515935 105 ntBASIC2.22□□□□□ -2.05
CCDC50Q8IVM0 MIR514B-201ENST00000516774 80 ntBASIC2.22□□□□□ -2.05
CCDC50Q8IVM0 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.22□□□□□ -2.05
CCDC50Q8IVM0 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC50Q8IVM0 AP003122.3-201ENST00000526316 255 ntBASIC2.22□□□□□ -2.05
CCDC50Q8IVM0 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.22□□□□□ -2.05
CCDC50Q8IVM0 MRPS36P5-201ENST00000551909 298 ntBASIC2.22□□□□□ -2.05
CCDC50Q8IVM0 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.22□□□□□ -2.05
CCDC50Q8IVM0 AL138976.2-201ENST00000563989 694 ntBASIC2.22□□□□□ -2.05
CCDC50Q8IVM0 AC091489.2-201ENST00000566263 604 ntBASIC2.22□□□□□ -2.05
CCDC50Q8IVM0 AC008751.2-201ENST00000597885 980 ntBASIC2.22□□□□□ -2.05
CCDC50Q8IVM0 BNIP3P9-201ENST00000603714 553 ntBASIC2.22□□□□□ -2.05
CCDC50Q8IVM0 AL355598.1-201ENST00000604169 202 ntBASIC2.22□□□□□ -2.05
CCDC50Q8IVM0 MIR6873-201ENST00000622788 63 ntBASIC2.22□□□□□ -2.05
CCDC50Q8IVM0 AC010149.2-201ENST00000637608 315 ntBASIC2.22□□□□□ -2.05
CCDC50Q8IVM0 AC092104.1-201ENST00000497346 1441 ntBASIC2.22□□□□□ -2.05
CCDC50Q8IVM0 AC010329.5-201ENST00000623497 2174 ntBASIC2.22□□□□□ -2.05
CCDC50Q8IVM0 MTND5P6-201ENST00000422338 1798 ntBASIC2.21□□□□□ -2.06
CCDC50Q8IVM0 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.21□□□□□ -2.06
CCDC50Q8IVM0 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.21□□□□□ -2.06
CCDC50Q8IVM0 RNY4P24-201ENST00000362735 96 ntBASIC2.21□□□□□ -2.06
CCDC50Q8IVM0 RNU5F-6P-201ENST00000362979 116 ntBASIC2.21□□□□□ -2.06
CCDC50Q8IVM0 SNORA72.3-201ENST00000365074 132 ntBASIC2.21□□□□□ -2.06
CCDC50Q8IVM0 RNU5E-6P-201ENST00000365574 115 ntBASIC2.21□□□□□ -2.06
CCDC50Q8IVM0 SUMO2P12-201ENST00000405924 140 ntBASIC2.21□□□□□ -2.06
CCDC50Q8IVM0 AL355497.1-201ENST00000406262 551 ntBASIC2.21□□□□□ -2.06
CCDC50Q8IVM0 SNORA11.4-201ENST00000408823 129 ntBASIC2.21□□□□□ -2.06
CCDC50Q8IVM0 RPL23AP39-201ENST00000415533 405 ntBASIC2.21□□□□□ -2.06
CCDC50Q8IVM0 RPS15AP12-201ENST00000419498 388 ntBASIC2.21□□□□□ -2.06
CCDC50Q8IVM0 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.21□□□□□ -2.06
CCDC50Q8IVM0 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.21□□□□□ -2.06
CCDC50Q8IVM0 RPL23AP7-203ENST00000449021 469 ntBASIC2.21□□□□□ -2.06
CCDC50Q8IVM0 AL118520.1-201ENST00000450770 291 ntBASIC2.21□□□□□ -2.06
CCDC50Q8IVM0 SSXP1-201ENST00000453640 473 ntBASIC2.21□□□□□ -2.06
CCDC50Q8IVM0 AP001324.2-201ENST00000461163 319 ntBASIC2.21□□□□□ -2.06
CCDC50Q8IVM0 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.21□□□□□ -2.06
CCDC50Q8IVM0 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.21□□□□□ -2.06
CCDC50Q8IVM0 SCARNA16.3-201ENST00000516595 184 ntBASIC2.21□□□□□ -2.06
CCDC50Q8IVM0 OR5AQ1P-201ENST00000527596 927 ntBASIC2.21□□□□□ -2.06
CCDC50Q8IVM0 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC50Q8IVM0 AC010186.2-204ENST00000537668 439 ntBASIC2.21□□□□□ -2.06
CCDC50Q8IVM0 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC50Q8IVM0 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC50Q8IVM0 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.21□□□□□ -2.06
CCDC50Q8IVM0 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC50Q8IVM0 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC50Q8IVM0 AC234772.3-201ENST00000602277 528 ntBASIC2.21□□□□□ -2.06
CCDC50Q8IVM0 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.21□□□□□ -2.06
CCDC50Q8IVM0 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.21□□□□□ -2.06
CCDC50Q8IVM0 AL512643.1-201ENST00000635735 524 ntBASIC2.21□□□□□ -2.06
CCDC50Q8IVM0 MTND5P42-201ENST00000637720 498 ntBASIC2.21□□□□□ -2.06
CCDC50Q8IVM0 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
CCDC50Q8IVM0 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.2□□□□□ -2.06
CCDC50Q8IVM0 RNU6-533P-201ENST00000384144 107 ntBASIC2.2□□□□□ -2.06
CCDC50Q8IVM0 RNU4-53P-201ENST00000410828 140 ntBASIC2.2□□□□□ -2.06
CCDC50Q8IVM0 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.2□□□□□ -2.06
CCDC50Q8IVM0 AC007560.1-201ENST00000426912 237 ntBASIC2.2□□□□□ -2.06
CCDC50Q8IVM0 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC50Q8IVM0 AL365184.2-201ENST00000431139 435 ntBASIC2.2□□□□□ -2.06
CCDC50Q8IVM0 FABP5P14-201ENST00000437273 393 ntBASIC2.2□□□□□ -2.06
CCDC50Q8IVM0 AL451074.3-201ENST00000437709 472 ntBASIC2.2□□□□□ -2.06
CCDC50Q8IVM0 HMGB3P12-201ENST00000438745 556 ntBASIC2.2□□□□□ -2.06
CCDC50Q8IVM0 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.2□□□□□ -2.06
CCDC50Q8IVM0 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.2□□□□□ -2.06
CCDC50Q8IVM0 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.2□□□□□ -2.06
CCDC50Q8IVM0 MTND2P14-201ENST00000482139 351 ntBASIC2.2□□□□□ -2.06
CCDC50Q8IVM0 RN7SKP265-201ENST00000516448 223 ntBASIC2.2□□□□□ -2.06
CCDC50Q8IVM0 RNU6-572P-201ENST00000516724 80 ntBASIC2.2□□□□□ -2.06
CCDC50Q8IVM0 SCARNA3-201ENST00000517097 143 ntBASIC2.2□□□□□ -2.06
CCDC50Q8IVM0 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.2□□□□□ -2.06
CCDC50Q8IVM0 AP003181.2-201ENST00000528941 181 ntBASIC2.2□□□□□ -2.06
CCDC50Q8IVM0 AC084851.1-201ENST00000529105 249 ntBASIC2.2□□□□□ -2.06
CCDC50Q8IVM0 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC50Q8IVM0 AC012435.1-202ENST00000568772 240 ntBASIC2.2□□□□□ -2.06
CCDC50Q8IVM0 MIR5571-201ENST00000577998 113 ntBASIC2.2□□□□□ -2.06
CCDC50Q8IVM0 MIR5002-201ENST00000584713 97 ntBASIC2.2□□□□□ -2.06
CCDC50Q8IVM0 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.2□□□□□ -2.06
CCDC50Q8IVM0 AC104763.2-201ENST00000604179 382 ntBASIC2.2□□□□□ -2.06
CCDC50Q8IVM0 SCARNA15.3-201ENST00000626315 122 ntBASIC2.2□□□□□ -2.06
CCDC50Q8IVM0 SCARNA4.1-201ENST00000628597 123 ntBASIC2.2□□□□□ -2.06
CCDC50Q8IVM0 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
CCDC50Q8IVM0 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CCDC50Q8IVM0 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CCDC50Q8IVM0 RNA5SP125-201ENST00000364843 120 ntBASIC2.19□□□□□ -2.06
CCDC50Q8IVM0 RNA5SP160-201ENST00000364866 120 ntBASIC2.19□□□□□ -2.06
CCDC50Q8IVM0 RNU6-898P-201ENST00000365627 104 ntBASIC2.19□□□□□ -2.06
CCDC50Q8IVM0 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
CCDC50Q8IVM0 Y_RNA.534-201ENST00000384599 112 ntBASIC2.19□□□□□ -2.06
CCDC50Q8IVM0 RNU6-19P-201ENST00000384718 107 ntBASIC2.19□□□□□ -2.06
CCDC50Q8IVM0 RNU6-817P-201ENST00000391083 104 ntBASIC2.19□□□□□ -2.06
CCDC50Q8IVM0 UBE2V1P2-201ENST00000397758 440 ntBASIC2.19□□□□□ -2.06
CCDC50Q8IVM0 RNU2-62P-201ENST00000410868 191 ntBASIC2.19□□□□□ -2.06
CCDC50Q8IVM0 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.19□□□□□ -2.06
CCDC50Q8IVM0 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC50Q8IVM0 SEPT2P1-201ENST00000419651 180 ntBASIC2.19□□□□□ -2.06
CCDC50Q8IVM0 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC50Q8IVM0 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC50Q8IVM0 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms