Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 HMGB1P9-201ENST00000429856 646 ntBASIC3.4□□□□□ -1.87
RNF44Q7L0R7 HMGN2P31-201ENST00000432430 273 ntBASIC3.4□□□□□ -1.87
RNF44Q7L0R7 AC098831.1-201ENST00000440661 216 ntBASIC3.4□□□□□ -1.87
RNF44Q7L0R7 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.4□□□□□ -1.87
RNF44Q7L0R7 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.4□□□□□ -1.87
RNF44Q7L0R7 AC233279.1-201ENST00000455300 423 ntBASIC3.4□□□□□ -1.87
RNF44Q7L0R7 TRBVA-201ENST00000498804 316 ntBASIC3.4□□□□□ -1.87
RNF44Q7L0R7 AC114781.4-201ENST00000513707 639 ntBASIC3.4□□□□□ -1.87
RNF44Q7L0R7 RNU6-323P-201ENST00000521915 107 ntBASIC3.4□□□□□ -1.87
RNF44Q7L0R7 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.4□□□□□ -1.87
RNF44Q7L0R7 NACAP3-201ENST00000552100 481 ntBASIC3.4□□□□□ -1.87
RNF44Q7L0R7 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.4□□□□□ -1.87
RNF44Q7L0R7 MIR3672-201ENST00000584290 82 ntBASIC3.4□□□□□ -1.87
RNF44Q7L0R7 AC091135.1-201ENST00000585943 307 ntBASIC3.4□□□□□ -1.87
RNF44Q7L0R7 AC005498.1-201ENST00000592125 465 ntBASIC3.4□□□□□ -1.87
RNF44Q7L0R7 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.4□□□□□ -1.87
RNF44Q7L0R7 AC008739.3-201ENST00000603262 127 ntBASIC3.4□□□□□ -1.87
RNF44Q7L0R7 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.4□□□□□ -1.87
RNF44Q7L0R7 NUTF2P8-201ENST00000604593 363 ntBASIC3.4□□□□□ -1.87
RNF44Q7L0R7 U3.45-201ENST00000607547 219 ntBASIC3.4□□□□□ -1.87
RNF44Q7L0R7 MIR7851-201ENST00000610611 160 ntBASIC3.4□□□□□ -1.87
RNF44Q7L0R7 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.4□□□□□ -1.87
RNF44Q7L0R7 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.4□□□□□ -1.87
RNF44Q7L0R7 U6.98-201ENST00000637157 84 ntBASIC3.4□□□□□ -1.87
RNF44Q7L0R7 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.87
RNF44Q7L0R7 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RNF44Q7L0R7 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RNF44Q7L0R7 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
RNF44Q7L0R7 AC233263.6-201ENST00000631132 1963 ntBASIC3.4□□□□□ -1.87
RNF44Q7L0R7 CEP170P1-201ENST00000502249 4587 ntBASIC3.39□□□□□ -1.87
RNF44Q7L0R7 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
RNF44Q7L0R7 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RNF44Q7L0R7 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
RNF44Q7L0R7 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.39□□□□□ -1.87
RNF44Q7L0R7 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RNF44Q7L0R7 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
RNF44Q7L0R7 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.39□□□□□ -1.87
RNF44Q7L0R7 SNORA71.3-201ENST00000362582 128 ntBASIC3.39□□□□□ -1.87
RNF44Q7L0R7 RNA5SP119-201ENST00000362715 117 ntBASIC3.39□□□□□ -1.87
RNF44Q7L0R7 Y_RNA.142-201ENST00000363491 102 ntBASIC3.39□□□□□ -1.87
RNF44Q7L0R7 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.39□□□□□ -1.87
RNF44Q7L0R7 MIR23B-201ENST00000384832 97 ntBASIC3.39□□□□□ -1.87
RNF44Q7L0R7 MIR34A-201ENST00000385130 110 ntBASIC3.39□□□□□ -1.87
RNF44Q7L0R7 MIR670-201ENST00000390142 98 ntBASIC3.39□□□□□ -1.87
RNF44Q7L0R7 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.39□□□□□ -1.87
RNF44Q7L0R7 VN1R36P-201ENST00000414936 291 ntBASIC3.39□□□□□ -1.87
RNF44Q7L0R7 RAC1P3-201ENST00000416129 580 ntBASIC3.39□□□□□ -1.87
RNF44Q7L0R7 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.39□□□□□ -1.87
RNF44Q7L0R7 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.39□□□□□ -1.87
RNF44Q7L0R7 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.39□□□□□ -1.87
RNF44Q7L0R7 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.39□□□□□ -1.87
RNF44Q7L0R7 MTND4LP16-201ENST00000440828 295 ntBASIC3.39□□□□□ -1.87
RNF44Q7L0R7 SNRPEP8-201ENST00000442866 260 ntBASIC3.39□□□□□ -1.87
RNF44Q7L0R7 RBMY2UP-201ENST00000453474 324 ntBASIC3.39□□□□□ -1.87
RNF44Q7L0R7 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.39□□□□□ -1.87
RNF44Q7L0R7 PPP1R2P5-201ENST00000457256 603 ntBASIC3.39□□□□□ -1.87
RNF44Q7L0R7 AL031183.1-201ENST00000457667 207 ntBASIC3.39□□□□□ -1.87
RNF44Q7L0R7 snoU109.2-201ENST00000459316 135 ntBASIC3.39□□□□□ -1.87
RNF44Q7L0R7 RN7SL594P-201ENST00000470590 287 ntBASIC3.39□□□□□ -1.87
RNF44Q7L0R7 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.39□□□□□ -1.87
RNF44Q7L0R7 AC026801.1-201ENST00000497178 464 ntBASIC3.39□□□□□ -1.87
RNF44Q7L0R7 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.39□□□□□ -1.87
RNF44Q7L0R7 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.39□□□□□ -1.87
RNF44Q7L0R7 RNU6-256P-201ENST00000516747 97 ntBASIC3.39□□□□□ -1.87
RNF44Q7L0R7 AC087854.1-201ENST00000519706 414 ntBASIC3.39□□□□□ -1.87
RNF44Q7L0R7 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.39□□□□□ -1.87
RNF44Q7L0R7 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.39□□□□□ -1.87
RNF44Q7L0R7 MIR3922-201ENST00000585192 84 ntBASIC3.39□□□□□ -1.87
RNF44Q7L0R7 AC024220.1-201ENST00000603675 484 ntBASIC3.39□□□□□ -1.87
RNF44Q7L0R7 LARP7P1-201ENST00000605576 316 ntBASIC3.39□□□□□ -1.87
RNF44Q7L0R7 AC087045.1-201ENST00000605856 382 ntBASIC3.39□□□□□ -1.87
RNF44Q7L0R7 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.39□□□□□ -1.87
RNF44Q7L0R7 AC025253.1-201ENST00000613623 543 ntBASIC3.39□□□□□ -1.87
RNF44Q7L0R7 Y_RNA.804-201ENST00000615262 101 ntBASIC3.39□□□□□ -1.87
RNF44Q7L0R7 MIR6075-201ENST00000620782 95 ntBASIC3.39□□□□□ -1.87
RNF44Q7L0R7 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
RNF44Q7L0R7 GABRG2-229ENST00000641017 3628 ntBASIC3.39□□□□□ -1.87
RNF44Q7L0R7 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.39□□□□□ -1.87
RNF44Q7L0R7 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.39□□□□□ -1.87
RNF44Q7L0R7 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RNF44Q7L0R7 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.39□□□□□ -1.87
RNF44Q7L0R7 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.38□□□□□ -1.87
RNF44Q7L0R7 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.38□□□□□ -1.87
RNF44Q7L0R7 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
RNF44Q7L0R7 RNU6-1013P-201ENST00000384180 107 ntBASIC3.38□□□□□ -1.87
RNF44Q7L0R7 MIR218-2-201ENST00000385006 110 ntBASIC3.38□□□□□ -1.87
RNF44Q7L0R7 AC016831.2-201ENST00000417179 352 ntBASIC3.38□□□□□ -1.87
RNF44Q7L0R7 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.38□□□□□ -1.87
RNF44Q7L0R7 AC005019.1-201ENST00000436455 431 ntBASIC3.38□□□□□ -1.87
RNF44Q7L0R7 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.38□□□□□ -1.87
RNF44Q7L0R7 RNU7-23P-201ENST00000459465 62 ntBASIC3.38□□□□□ -1.87
RNF44Q7L0R7 RNU7-138P-201ENST00000459479 64 ntBASIC3.38□□□□□ -1.87
RNF44Q7L0R7 AC128713.1-201ENST00000471495 306 ntBASIC3.38□□□□□ -1.87
RNF44Q7L0R7 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.38□□□□□ -1.87
RNF44Q7L0R7 AC110768.1-201ENST00000509222 400 ntBASIC3.38□□□□□ -1.87
RNF44Q7L0R7 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.38□□□□□ -1.87
RNF44Q7L0R7 RNU6-711P-201ENST00000517255 106 ntBASIC3.38□□□□□ -1.87
RNF44Q7L0R7 AP000889.2-201ENST00000532684 490 ntBASIC3.38□□□□□ -1.87
RNF44Q7L0R7 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.38□□□□□ -1.87
RNF44Q7L0R7 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms