Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
VPS13CQ709C8 Y_RNA.790-201ENST00000614282 102 ntBASIC0.1□□□□□ -2.39
VPS13CQ709C8 Y_RNA.782-201ENST00000614695 102 ntBASIC0.1□□□□□ -2.39
VPS13CQ709C8 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
VPS13CQ709C8 RNU6-629P-201ENST00000384061 103 ntBASIC0.1□□□□□ -2.39
VPS13CQ709C8 BPY2DP-201ENST00000422208 265 ntBASIC0.1□□□□□ -2.39
VPS13CQ709C8 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.1□□□□□ -2.39
VPS13CQ709C8 AC019288.1-201ENST00000557918 224 ntBASIC0.1□□□□□ -2.39
VPS13CQ709C8 AC091489.2-201ENST00000566263 604 ntBASIC0.1□□□□□ -2.39
VPS13CQ709C8 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
VPS13CQ709C8 AL513475.1-201ENST00000406602 315 ntBASIC0.1□□□□□ -2.39
VPS13CQ709C8 AC241584.1-201ENST00000438469 1241 ntBASIC0.1□□□□□ -2.39
VPS13CQ709C8 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.1□□□□□ -2.39
VPS13CQ709C8 AP005902.1-201ENST00000521358 186 ntBASIC0.1□□□□□ -2.39
VPS13CQ709C8 AL158211.1-201ENST00000566763 763 ntBASIC0.1□□□□□ -2.39
VPS13CQ709C8 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC0.1□□□□□ -2.39
VPS13CQ709C8 U3.9-201ENST00000363823 204 ntBASIC0.09□□□□□ -2.39
VPS13CQ709C8 RNU4-9P-201ENST00000364951 139 ntBASIC0.09□□□□□ -2.39
VPS13CQ709C8 RNU6-968P-201ENST00000384076 107 ntBASIC0.09□□□□□ -2.39
VPS13CQ709C8 RNU6-920P-201ENST00000410926 92 ntBASIC0.09□□□□□ -2.39
VPS13CQ709C8 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.09□□□□□ -2.39
VPS13CQ709C8 CASP3P1-201ENST00000446037 609 ntBASIC0.09□□□□□ -2.39
VPS13CQ709C8 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC0.09□□□□□ -2.39
VPS13CQ709C8 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.09□□□□□ -2.39
VPS13CQ709C8 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC0.09□□□□□ -2.39
VPS13CQ709C8 AC123767.1-202ENST00000620407 817 ntBASIC0.09□□□□□ -2.39
VPS13CQ709C8 SNORD3E-201ENST00000362899 217 ntBASIC0.09□□□□□ -2.39
VPS13CQ709C8 SNORD49B-201ENST00000365172 72 ntBASIC0.09□□□□□ -2.39
VPS13CQ709C8 PIGFP2-201ENST00000421400 651 ntBASIC0.09□□□□□ -2.39
VPS13CQ709C8 MTATP6P7-201ENST00000453315 681 ntBASIC0.09□□□□□ -2.39
VPS13CQ709C8 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.09□□□□□ -2.39
VPS13CQ709C8 AP001893.2-201ENST00000526949 202 ntBASIC0.09□□□□□ -2.39
VPS13CQ709C8 AC073410.2-201ENST00000603240 332 ntBASIC0.09□□□□□ -2.39
VPS13CQ709C8 AL117342.1-201ENST00000404861 406 ntBASIC0.09□□□□□ -2.4
VPS13CQ709C8 RNY1P9-201ENST00000532431 109 ntBASIC0.09□□□□□ -2.4
VPS13CQ709C8 AGGF1P5-201ENST00000567900 919 ntBASIC0.09□□□□□ -2.4
VPS13CQ709C8 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC0.09□□□□□ -2.4
VPS13CQ709C8 AC011155.2-201ENST00000623202 216 ntBASIC0.09□□□□□ -2.4
VPS13CQ709C8 GDI2P1-201ENST00000429312 1336 ntBASIC0.09□□□□□ -2.4
VPS13CQ709C8 RNU6-1222P-201ENST00000384615 107 ntBASIC0.08□□□□□ -2.4
VPS13CQ709C8 MIR1295A-201ENST00000408463 79 ntBASIC0.08□□□□□ -2.4
VPS13CQ709C8 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC0.08□□□□□ -2.4
VPS13CQ709C8 RNU6-491P-201ENST00000516099 110 ntBASIC0.08□□□□□ -2.4
VPS13CQ709C8 RNA5SP404-201ENST00000517118 132 ntBASIC0.08□□□□□ -2.4
VPS13CQ709C8 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
VPS13CQ709C8 EIF1P1-201ENST00000421436 341 ntBASIC0.08□□□□□ -2.4
VPS13CQ709C8 CR769776.1-201ENST00000441254 787 ntBASIC0.08□□□□□ -2.4
VPS13CQ709C8 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC0.08□□□□□ -2.4
VPS13CQ709C8 RNU6-775P-201ENST00000459318 96 ntBASIC0.08□□□□□ -2.4
VPS13CQ709C8 MTND1P16-201ENST00000465177 898 ntBASIC0.08□□□□□ -2.4
VPS13CQ709C8 SYPL1P1-201ENST00000473622 768 ntBASIC0.08□□□□□ -2.4
VPS13CQ709C8 COX7A2P2-201ENST00000505291 250 ntBASIC0.08□□□□□ -2.4
VPS13CQ709C8 NDUFB4P2-201ENST00000509515 391 ntBASIC0.08□□□□□ -2.4
VPS13CQ709C8 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC0.08□□□□□ -2.4
VPS13CQ709C8 Y_RNA.495-201ENST00000384435 112 ntBASIC0.08□□□□□ -2.4
VPS13CQ709C8 SSR1P1-201ENST00000407630 814 ntBASIC0.08□□□□□ -2.4
VPS13CQ709C8 RNU6-272P-201ENST00000411028 104 ntBASIC0.08□□□□□ -2.4
VPS13CQ709C8 AC092393.1-201ENST00000439625 742 ntBASIC0.08□□□□□ -2.4
VPS13CQ709C8 AC009712.1-201ENST00000564938 316 ntBASIC0.08□□□□□ -2.4
VPS13CQ709C8 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.08□□□□□ -2.4
VPS13CQ709C8 AC090132.2-201ENST00000615881 347 ntBASIC0.08□□□□□ -2.4
VPS13CQ709C8 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.08□□□□□ -2.4
VPS13CQ709C8 Y_RNA.583-201ENST00000391033 113 ntBASIC0.07□□□□□ -2.4
VPS13CQ709C8 RN7SKP158-201ENST00000410453 326 ntBASIC0.07□□□□□ -2.4
VPS13CQ709C8 AC241520.1-201ENST00000422654 1099 ntBASIC0.07□□□□□ -2.4
VPS13CQ709C8 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC0.07□□□□□ -2.4
VPS13CQ709C8 AC025165.5-201ENST00000602802 578 ntBASIC0.07□□□□□ -2.4
VPS13CQ709C8 Z83818.1-201ENST00000603584 150 ntBASIC0.07□□□□□ -2.4
VPS13CQ709C8 RNU4-32P-201ENST00000363404 141 ntBASIC0.07□□□□□ -2.4
VPS13CQ709C8 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.07□□□□□ -2.4
VPS13CQ709C8 AL359704.1-201ENST00000411586 781 ntBASIC0.07□□□□□ -2.4
VPS13CQ709C8 ELOCP6-201ENST00000429066 328 ntBASIC0.07□□□□□ -2.4
VPS13CQ709C8 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.07□□□□□ -2.4
VPS13CQ709C8 ELOCP12-201ENST00000458706 328 ntBASIC0.07□□□□□ -2.4
VPS13CQ709C8 MIR4299-201ENST00000577899 72 ntBASIC0.07□□□□□ -2.4
VPS13CQ709C8 AC015849.6-201ENST00000605454 474 ntBASIC0.07□□□□□ -2.4
VPS13CQ709C8 MTCO2P32-201ENST00000514865 403 ntBASIC0.07□□□□□ -2.4
VPS13CQ709C8 IGKV1-22-201ENST00000524313 326 ntBASIC0.07□□□□□ -2.4
VPS13CQ709C8 NIFKP6-201ENST00000598115 845 ntBASIC0.07□□□□□ -2.4
VPS13CQ709C8 uc_338.6-201ENST00000613544 171 ntBASIC0.07□□□□□ -2.4
VPS13CQ709C8 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC0.07□□□□□ -2.4
VPS13CQ709C8 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.07□□□□□ -2.4
VPS13CQ709C8 RNU2-64P-201ENST00000411315 191 ntBASIC0.06□□□□□ -2.4
VPS13CQ709C8 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC0.06□□□□□ -2.4
VPS13CQ709C8 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC0.06□□□□□ -2.4
VPS13CQ709C8 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.06□□□□□ -2.4
VPS13CQ709C8 AL049830.1-201ENST00000468034 425 ntBASIC0.06□□□□□ -2.4
VPS13CQ709C8 AC099513.1-201ENST00000490423 301 ntBASIC0.06□□□□□ -2.4
VPS13CQ709C8 RNU6-362P-201ENST00000516736 90 ntBASIC0.06□□□□□ -2.4
VPS13CQ709C8 AC017083.3-201ENST00000609955 700 ntBASIC0.06□□□□□ -2.4
VPS13CQ709C8 DUXAP10-204ENST00000612052 616 ntBASIC0.06□□□□□ -2.4
VPS13CQ709C8 MIR8065-201ENST00000620577 100 ntBASIC0.06□□□□□ -2.4
VPS13CQ709C8 AL356585.4-201ENST00000623078 1229 ntBASIC0.06□□□□□ -2.4
VPS13CQ709C8 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.06□□□□□ -2.4
VPS13CQ709C8 Y_RNA.568-201ENST00000384742 113 ntBASIC0.06□□□□□ -2.4
VPS13CQ709C8 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC0.06□□□□□ -2.4
VPS13CQ709C8 AC090953.1-201ENST00000604305 1092 ntBASIC0.06□□□□□ -2.4
VPS13CQ709C8 AL159152.1-201ENST00000635019 2587 ntBASIC0.06□□□□□ -2.4
VPS13CQ709C8 CCNG1P1-201ENST00000406783 885 ntBASIC0.06□□□□□ -2.4
VPS13CQ709C8 RNA5SP451-201ENST00000410588 110 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms